CN184992
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_CORGL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Corynebacterium glutamicum GN=sucC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.427e-21 Identity = 68/236 (28.81%), Postives = 122/236 (51.69%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +++ EYQ +L +G+ V KG+ ++ + +KA +++ VVK+Q+ GGRG GGV + + D A +LG + +G V++V + + + E YF+I+LDR + + +GG IE LA++ P + KV +D GI ++ A ++V G +VA++ I + K+++++ E + TL+E+NPL T ++A D K+ A FR Sbjct: 1 MDLFEYQARDLFETHGVPVLKGIVASTPEAARKAAEEI---GGLTVVKAQVKVGGRGKA-------GGVRVAPTSAQAFDAADAILGMDI-------KGHTVNQVMVAQGADIAEEYYFSILLDRANRSYLAMCSVEGGMEIEILAKEKPEALAKVEVDPLTGIDEDKAREIVTAAGFETEVAEK--VIPVLIKIWQVYYEEEATLVEVNPLVLTDDGDVIALDGKITLDDNADFR 217
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_ARTAT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Arthrobacter aurescens (strain TC1) GN=sucC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.427e-21 Identity = 69/234 (29.49%), Postives = 113/234 (48.29%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +++ EYQ ++ +G+ V G+ + +E K A + + VVK+Q+ GGRG GGV + K EE + + +LG + +G V+KV + + + E YF+++LDR + + +GG IE LA + P + K+ ID GI A ++V R + + KL+ +F + D TL+E+NPL T ++VA D KV A FR Sbjct: 1 MDLFEYQARDMFEAHGVPVLAGIVAHTPEEAKAAAEKI---GGVTVVKAQVKVGGRGKA-------GGVKVAKTAEEALEHSTNILGMDI-------KGHTVNKVMIAQGADIAEEFYFSVLLDRANRNYLAMCSVEGGMEIEQLAVERPEALAKIAIDPAVGIDQAKADEIVAAAGFAEELRGKVADVILKLWDVFKKEDATLVEVNPLVRTGAGEIVALDGKVSLDENADFR 217
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_MYCVP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=sucC PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.700e-21 Identity = 70/235 (29.79%), Postives = 117/235 (49.79%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +++ EYQ EL AK+ + G S ++ K +++ K ++VK+Q+ GGRG K+G G + E+ A +LG + +G IV K+ + E + E Y + +LDR + + +GG IE++A P + KVP+D G+ + A ++ + L +V D A + KL+++F + D TL+E+NPL T Q++A D KV A FR Sbjct: 1 MDLFEYQAKELFAKHNVPTTPGRVTESAEDAKAIAEEI---GKPVMVKAQVKVGGRG----KAG--GVKYAATPEDALTHAQNILGLDI-------KGHIVKKLLVAEASDIAEEYYISFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDEAFAREIAEKGHLPAEVLDA--AAVTIAKLWEVFVKEDATLVEVNPLVRTPDDQILALDGKVTLDANADFR 217
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC1_ARCFU (Succinyl-CoA ligase [ADP-forming] subunit beta-1 OS=Archaeoglobus fulgidus GN=sucC1 PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 9.700e-21 Identity = 69/225 (30.67%), Postives = 116/225 (51.56%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKV 834 + +HE+Q ++ AK+GI VP+G S +E +K + + +VVK+QIL GGRG GGV EE +++A K+LG + +G V KV + E+L++ E Y ++D+ + P +I GG +E++A K+P+ I ++ D G+ D + K + + + + +KKL + + L EINPLA T +AADA++ Sbjct: 1 MRLHEHQAKQIFAKHGIRVPRGEVATSPEEAEKIAEKL---GGRVVVKAQILVGGRGKA-------GGVKKANSPEEAKEVAKKILGMTI-------KGHRVEKVLVEEQLNMRKEYYVGYVVDKSSRLPTVIFSRMGGMDVEEIAAKHPDAIHRIYFDPLWGLKDYEVRKALFRAGFEGEEFKQMFDIIKKLVDIAFAYEAELTEINPLAVTDE-GFLAADARL 207
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_SALAI (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Salinispora arenicola (strain CNS-205) GN=sucC PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.267e-20 Identity = 74/236 (31.36%), Postives = 115/236 (48.73%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 ++++EYQG +L ++G+ V G + +E + + + +VVK+Q+ GGRG GGV + + +E A +LG + +G V KV + + E YF+ +LDR + I GG IE +A + P +VK PID G+ A +++ G +V D+ A+E L+K F D TL+E+NPLA T L+ DAKV AAFR Sbjct: 1 MDLYEYQGRDLFERHGLPVLAGGVATTPEEARAIAERL---GGRVVVKAQVKVGGRGKA-------GGVKLAEGADETVARATDILGMDI-------KGHTVHKVMITVTADVAEEYYFSYLLDRANRTFLCIASVAGGMDIEQVAAETPEKVVKAPIDANTGVDAAMARQIITRAGFPAEVVDQ--AVEVAVDLWKAFVAEDATLVEVNPLARTGQGGLLLLDAKVSLDENAAFR 217
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_CHLSY (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=sucC PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.267e-20 Identity = 74/236 (31.36%), Postives = 122/236 (51.69%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKG-LAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQV-KKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 + +HEYQ +L+A++GI V G +AV V+ A + P +VVK+Q+ GGRG GGV + + E E +A ++LG + +G V KV + E +S E+Y + +LDR + ++I ++GG IE++A+ P+ I+K+P G+ D A ++ + + Q+ LY+ F E D +L+EINPL + L+A D+K+ A FR Sbjct: 1 MKLHEYQARDLLARFGIPVTGGGVAVTPVEARTIAAEIGGP----VVVKAQVHVGGRGKA-------GGVKLAQTPTEAEQVARQILGMNI-------KGLTVEKVLVAEAVSYKRELYLSAILDRGSKRVMMIASAEGGVEIEEVAKTNPDAIIKIPAHPTMGLLDFQARELAFRIGLNDGKQARQFAQIASALYRAFVECDASLVEINPLVVKADGSLLALDSKILLDESALFR 218
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_CHLAA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=sucC PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.267e-20 Identity = 74/236 (31.36%), Postives = 122/236 (51.69%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKG-LAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQV-KKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 + +HEYQ +L+A++GI V G +AV V+ A + P +VVK+Q+ GGRG GGV + + E E +A ++LG + +G V KV + E +S E+Y + +LDR + ++I ++GG IE++A+ P+ I+K+P G+ D A ++ + + Q+ LY+ F E D +L+EINPL + L+A D+K+ A FR Sbjct: 1 MKLHEYQARDLLARFGIPVTGGGVAVTPVEARTIAAEIGGP----VVVKAQVHVGGRGKA-------GGVKLAQTPTEAEQVARQILGMNI-------KGLTVEKVLVAEAVSYKRELYLSAILDRGSKRVMMIASAEGGVEIEEVAKTNPDAIIKIPAHPTMGLLDFQARELAFRIGLNDGKQARQFAQIASALYRAFVECDASLVEINPLVVKADGSLLALDSKILLDESALFR 218
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_ARTCA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=sucC PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.655e-20 Identity = 68/234 (29.06%), Postives = 113/234 (48.29%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +++ EYQ ++ +G+ V G+ + +E K A + + VVK+Q+ GGRG GGV + K +E + + +LG + +G V+KV + + + E YF+++LDR + + +GG IE LA + P + K+ ID GI A ++V R + + KL+ +F + D TL+E+NPL +T +VA D KV A FR Sbjct: 1 MDLFEYQARDMFEAHGVPVLAGIVAYTPEEAKAAAEKI---GGVTVVKAQVKVGGRGKA-------GGVKVAKSADEALEHSTNILGMDI-------KGHTVNKVMIAQGADIAEEYYFSVLLDRANRNYLAMCSVEGGMEIEQLAVERPEALAKIAIDPAVGIDQAKADEIVAAAGFAEELRGKVADVILKLWDVFKKEDATLVEVNPLVKTGAGDIVALDGKVSLDENAEFR 217
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_METTH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Methanobacterium thermoautotrophicum GN=sucC PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.161e-20 Identity = 69/229 (30.13%), Postives = 117/229 (51.09%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVK----KLYKLFCESDCTLLEINPLAETSG*QLVAADAKVK 837 + +EY E+ GI+ P+G + +E ++ ++ D + VKSQ+L GGRG GG+ V ++ G +L + +G+ V KV + EK+ + E+Y + ++DR P+I+ ++GG IE+LA + P IV+ I+ + +A ++ A K+ ++ I V KLY+LF + D L EINPL SG ++AADAK++ Sbjct: 1 MKFYEYSAKEIFRAEGISTPRGGVAETPEEAERIAAELGCD---VAVKSQVLTGGRGKA-------GGIRFASPSGVAEVTGDLLSSEV-------RGETVEKVLIEEKIPIDRELYVSAVIDRTAKMPLIMASAEGGVDIEELAARSPEKIVRYHINPLDEFLPYEAREI----ARKMGLESELIPSVGGVIWKLYQLFRKYDARLAEINPLV-ISGDSVIAADAKLE 207
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_ARTS2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Arthrobacter sp. (strain FB24) GN=sucC PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.161e-20 Identity = 69/234 (29.49%), Postives = 114/234 (48.72%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +++ EYQ ++ +G+ V G+ + +E K A + + VVK+Q+ GGRG GGV + K +E + + +LG + +G V+KV + + + E YF+++LDR + + +GG IE LA + P+ + KV ID GI A ++V R + + KL+ +F + D TL+E+NPL +T +VA D KV A FR Sbjct: 1 MDLFEYQARDMFEAHGVPVLAGIVAHTPEEAKAAAEKI---GGVTVVKAQVKVGGRGKA-------GGVKVAKTADEALEHSTNILGMDI-------KGHTVNKVMIAQGADIAEEYYFSVLLDRANRNYLAMCSVEGGMEIEQLAVERPDALAKVAIDPAVGIDQAKADEIVAAAGFAEELRGKVADVILKLWDVFKKEDATLVEVNPLVKTGAGDIVALDGKVTLDENADFR 217 The following BLAST results are available for this feature:
BLAST of CN184992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184992 ID=CN184992; Name=CN184992; organism=Citrus sinensis; type=EST; length=861bpback to top |