CN184992
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_ALKMQ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Alkaliphilus metalliredigens (strain QYMF) GN=sucC PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.660e-37 Identity = 89/227 (39.21%), Postives = 135/227 (59.47%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF 840 +NIHEYQG E+M +YGI+VP+ +V+E +A D+ + + VK+QI AGGRG GGV I + EE + A +L +IL+TKQTGP+GK+V++V + E L + E Y + +D T+ ++IG +GG IE++AEK P+ I K ID G+ A ++ + A +A + + +Y+LF E DC+++EINPL T ++VA D KV F Sbjct: 1 MNIHEYQGKEIMKQYGISVPRSRITFTVEEAVQAAIDL--GCEVIAVKAQIHAGGRGKA-------GGVKITRSLEETKSAAEAILDKILITKQTGPEGKVVNQVLIEEGLKIEKECYLSCAVDSTTSTVVLIGSPEGGMDIEEVAEKTPHKIFKESIDPAIGLQQYQARRLAFNMGINEACLQEAAQCIMNIYRLFMEKDCSMVEINPLITTEEHKVVALDCKVCF 218
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_NAUPA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=sucC PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.393e-37 Identity = 87/227 (38.33%), Postives = 133/227 (58.59%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF 840 +NIHEYQ E+ KYG+ P+G + E ++ +++ VVK+QI AGGRG GGV + K +EVE +A +MLG LVT QTGP+GK+V KVY+ E + +E+Y ++LDR P+++ ++GG IE++AEK P I+KV ID G A K+ GL ++ + I+ LY ++ ++D ++EINPL +T + +A DAK+ F Sbjct: 1 MNIHEYQAKEIFRKYGVPTPRGGVAFTGPEARRVAEEL--GGNLWVVKAQIHAGGRGKA-------GGVKLAKSLDEVEKIAEEMLGMTLVTHQTGPEGKVVKKVYIEEGADIKDELYLGMVLDRALEMPVMMASTEGGMEIEEVAEKTPEKIIKVAIDPAIGFQPFHARKLAFGLGLPKDEQREFIKFASALYNVYMDNDAEMIEINPLIKTGDGKFLALDAKMGF 218
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_EXISA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=sucC PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.393e-37 Identity = 91/234 (38.89%), Postives = 135/234 (57.69%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +NIHEYQ EL+ ++G+ VP G +V+E A + D + VVK+QI AGGRG GGV + K EEV+ A ++LG+ LVT QTGP+GK+V ++Y+ E ++ E Y ++LDR +I+G S+GG IE++AE P I K +D G+ A ++ + N+ + V KLYK++ E+DCT+ EINPL T ++A DAK+ F A +R Sbjct: 1 MNIHEYQAKELLREFGVAVPTGYPAFTVEEAVAAAAKL--DGEVKVVKAQIHAGGRGKA-------GGVKLAKTDEEVKQYASEILGKTLVTHQTGPEGKVVQRLYIEEGSAIDQEFYLGLVLDRSIGRIVIMGSSEGGMDIEEVAEHTPEKIHKEIVDPVVGLRPFQARRLAFKMEVPTKLVNEFSDMVMKLYKVYVETDCTIAEINPLVTTKDGNVIALDAKLNFDSNALYR 225
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_BURS3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia sp. (strain 383) GN=sucC PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.393e-37 Identity = 95/238 (39.92%), Postives = 142/238 (59.66%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 + IHEYQG E++ K+G+ VP+G SVDE K +++ VVK+QI AGGRG G GGV + K E+V + A ++LG LVT QTGP+G+ V+++ + E + E+Y ++++DR T +++G S+GG IE++AEK+P +I KV ++ G+ D A D LA K+ +I Q + LYK F E+D +L EINPL +S +++A DAK F A FR Sbjct: 1 MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEEL--GGPVWVVKAQIHAGGRGKG-------GGVKVAKSIEQVREYANQILGMQLVTHQTGPEGQKVNRLMVEEGADIKQELYVSLVVDRVTQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDAQA----DDLAAKIGVPAASIPQARAILQGLYKAFWETDASLAEINPLNVSSDGKVIALDAKFNFDSNALFR 225
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCB_TRIVA (Succinyl-CoA ligase [GDP-forming] subunit beta, hydrogenosomal OS=Trichomonas vaginalis PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.393e-37 Identity = 87/230 (37.83%), Postives = 135/230 (58.70%), Query Frame = 1 Query: 157 RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTF-KSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF 840 R NI E+Q E+ AKY + L S +E +A + + + V+K+Q+ GGRG G + ++G K GVH VK +E +A +MLG LVTKQTG G + V L + + + E+YFAI+LDR+T P++I ++GG IE++A +P I K +D GIT+E A + L ++ + +++KL+KLF SD T +E+NPLAET+ +++ D+K F Sbjct: 8 RNFNILEWQSKEICAKYNVAAGINLVARSPEEAAEAFRKM--NLPAAVIKAQVYCGGRGKGHWLETGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGKDGLLCQAVMLSDPVEVKRELYFAILLDRQTQSPVVIASTEGGVEIEEVAAHHPEKIHKFVLDGVEGITEEVAKNISTKLGLTGKAYDNGVVEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNF 235
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_RHIME (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhizobium meliloti GN=sucC PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.655e-37 Identity = 98/237 (41.35%), Postives = 132/237 (55.70%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +NIHEYQ L+ YG V +G+A+ S DE + A + + VVKSQI AGGRG G FK KGGV + K +EV A MLG LVTKQTGP GK V+++Y+ + + E+Y +I++DR + ++GG IE +AE P IV V ID G+T E+ + D L + R DA + LYK F E D +LLE+NPL + ++ DAKV F A FR Sbjct: 1 MNIHEYQAKALLKSYGAPVAEGVAIFSADEAEAAAKKL--PGPLYVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSVDEVVANAKDMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPEKGVTAENLKTLADALKLEGEARADAEKLFPILYKAFVEKDMSLLEVNPLIVMTNGRMRVLDAKVSFDGNALFR 235
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_SINMW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sinorhizobium medicae (strain WSM419) GN=sucC PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.647e-36 Identity = 97/237 (40.93%), Postives = 132/237 (55.70%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +NIHEYQ L+ YG V +G+A+ S DE A + + VVKSQI AGGRG G FK + KGGV + K +EV A +MLG LVTKQTGP GK V+++Y+ + + E+Y +I++DR + ++GG IE +AE P IV V ID G+T +D + + L R DA + LYK F E D +LLE+NPL + ++ DAKV F A FR Sbjct: 1 MNIHEYQAKALLKSYGAPVAEGVAIFSADEAAAAAKKL--PGPLYVVKSQIHAGGRGKGKFKELGADAKGGVRLAKSADEVVAHAREMLGNTLVTKQTGPSGKQVNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPDKGVTADDLKTLTEALKLDGEARADAEKLFPILYKAFVEKDMSLLEVNPLIVMTNGRMRVLDAKVSFDGNALFR 235
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_RHOS5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=sucC PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.647e-36 Identity = 94/237 (39.66%), Postives = 131/237 (55.27%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +NIHEYQ L+ YG V G V DE K A ++ VVK+QI AGGRG G FK +G KGGV + K E +LA +MLG+ LVT QTGP GK V+++Y+ E + E+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L + A ++ VK LY+ F E D +LEINPL + L DAKV F A +R Sbjct: 1 MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKSAAGEL--GGPLWVVKAQIHAGGRGKGKFKEPEAGEKGGVRLAKSVGEAAELAKQMLGRTLVTHQTGPSGKQVNRIYIEEGSDIARELYLALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLEGAQVKQCVQLVKNLYRAFVEKDMEMLEINPLIVMTDGNLKVLDAKVGFDNNALYR 235
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_GEOLS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=sucC PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.647e-36 Identity = 91/234 (38.89%), Postives = 135/234 (57.69%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +NIHEYQ E+++ YGI VP+ + D+V++A + + H VVK+QI AGGRG GGV +V E+ D+A ++ G+ LVTKQTGP+G V ++ + E + + E Y +I LDR+T+ +I ++GG IE++A+K P+ I + ID F G+ A K+ L A D +E + YK E DC+L+EINPL T L+A DAK+ F A +R Sbjct: 1 MNIHEYQAKEILSTYGIPVPRNRVALTADQVERAAK-MMGGH--CVVKAQIYAGGRGKA-------GGVKLVHHPEQASDVAKELFGKRLVTKQTGPEGLKVRRILVEETVEIAREFYLSITLDRETSRYCLIASAEGGMDIEEVAQKSPDKIHVLTIDPFTGLRTYQARKIALALGLSGAVCEDCVELILNTYKCCLEKDCSLIEINPLVVTRAGWLLAMDAKISFDDNAVYR 224
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_RHOSK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=sucC PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.151e-36 Identity = 94/237 (39.66%), Postives = 131/237 (55.27%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +NIHEYQ L+ YG V G V DE K A ++ VVK+QI AGGRG G FK +G KGGV + K E +LA +MLG+ LVT QTGP GK V+++Y+ E + E+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L + A ++ VK LY+ F E D +LEINPL + L DAKV F A +R Sbjct: 1 MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKSAAGEL--GGPLWVVKAQIHAGGRGKGKFKEPEAGEKGGVRLAKSVGEAAELAKQMLGRTLVTHQTGPAGKQVNRIYIEEGSDIARELYLALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLEGAQVKQCVQLVKNLYRAFVEKDMEMLEINPLIVMTDGNLKVLDAKVGFDNNALYR 235 The following BLAST results are available for this feature:
BLAST of CN184992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184992 ID=CN184992; Name=CN184992; organism=Citrus sinensis; type=EST; length=861bpback to top |