CN184992
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_RHOS4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=sucC PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.151e-36 Identity = 94/237 (39.66%), Postives = 131/237 (55.27%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +NIHEYQ L+ YG V G V DE K A ++ VVK+QI AGGRG G FK +G KGGV + K E +LA +MLG+ LVT QTGP GK V+++Y+ E + E+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L + A ++ VK LY+ F E D +LEINPL + L DAKV F A +R Sbjct: 1 MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKSAAGEL--GGPLWVVKAQIHAGGRGKGKFKEPEAGEKGGVRLAKSVGEAAELAKQMLGRTLVTHQTGPAGKQVNRIYIEEGSDIARELYLALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLEGAQVKQCVQLVKNLYRAFVEKDMEMLEINPLIVMTDGNLKVLDAKVGFDNNALYR 235
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_RHOS1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=sucC PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.151e-36 Identity = 94/237 (39.66%), Postives = 131/237 (55.27%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +NIHEYQ L+ YG V G V DE K A ++ VVK+QI AGGRG G FK +G KGGV + K E +LA +MLG+ LVT QTGP GK V+++Y+ E + E+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L + A ++ VK LY+ F E D +LEINPL + L DAKV F A +R Sbjct: 1 MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKSAAGEL--GGPLWVVKAQIHAGGRGKGKFKEPEAGEKGGVRLAKSVGEAAELAKQMLGRTLVTHQTGPAGKQVNRIYIEEGSDIARELYLALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLEGAQVKQCVQLVKNLYRAFVEKDMEMLEINPLIVMTDGNLKVLDAKVGFDNNALYR 235
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_CHLL2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=sucC PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.151e-36 Identity = 88/236 (37.29%), Postives = 139/236 (58.90%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKE--LVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +NIHEYQG +++ K+G++VP+G+ S DE K+A Q +F + +VVK+QI AGGRG GGV + K +E ++A +MLG LVT QTGP+GK VS++ + E +++ E Y I LDR T+ +++ ++GG IE +AE+ P+ ++K+ +D G+ A + L + +A+ + LY + D +L EINPL T +++A DAK+ F A FR Sbjct: 1 MNIHEYQGKDILKKFGVSVPRGIVAFSPDEAKQAAQQLFEEQGSPVVVVKAQIHAGGRGKA-------GGVKLAKSPDEAMEIARQMLGATLVTHQTGPEGKQVSRLLVEEGMNIDREFYVGITLDRSTSRNVLMVSTEGGMEIEKVAEETPDKLLKIQVDPLYGLQGFQAREAAFFLGLEGEQFRNAVTFIIALYNAYMTIDASLAEINPLVVTKEGRVLALDAKINFDGNALFR 229
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_BORPE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bordetella pertussis GN=sucC PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.151e-36 Identity = 92/234 (39.32%), Postives = 134/234 (57.26%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 + IHEYQG EL+ ++G+ VP+G+ SVDE A + + VVK+QI AGGRG G GGV + + +EV L+ ++LG LVT QTGPQG+ V ++ + E + E Y I+ DR T ++ S+GG IE++A P I+KV +D G+TD +AA++ G+ A A + +KLYK + ++D +L EINPL T ++A DAK F A FR Sbjct: 1 MKIHEYQGKELLKQFGVTVPRGIPAFSVDEAVAAAEKL--GGPVWVVKAQIHAGGRGKG-------GGVKLGRSIDEVRQLSSEILGMQLVTHQTGPQGQKVRRLLIEEGADIKKEYYVGIVTDRGTQRVCVMASSEGGMDIEEVAAHSPEKILKVFVDPAAGLTDAEAAELARGIGVPEASVGKAAAEFQKLYKAYWDTDASLAEINPLILTGSGDIIALDAKFNFDSNALFR 225
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_BORPA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bordetella parapertussis GN=sucC PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.151e-36 Identity = 92/234 (39.32%), Postives = 134/234 (57.26%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 + IHEYQG EL+ ++G+ VP+G+ SVDE A + + VVK+QI AGGRG G GGV + + +EV L+ ++LG LVT QTGPQG+ V ++ + E + E Y I+ DR T ++ S+GG IE++A P I+KV +D G+TD +AA++ G+ A A + +KLYK + ++D +L EINPL T ++A DAK F A FR Sbjct: 1 MKIHEYQGKELLKQFGVTVPRGIPAFSVDEAVAAAEKL--GGPVWVVKAQIHAGGRGKG-------GGVKLGRSIDEVRQLSSEILGMQLVTHQTGPQGQKVRRLLIEEGADIKKEYYVGIVTDRGTQRVCVMASSEGGMDIEEVAAHSPEKILKVFVDPAAGLTDAEAAELARGIGVPEASVGKAAAEFQKLYKAYWDTDASLAEINPLILTGSGDIIALDAKFNFDSNALFR 225
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_BORBR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bordetella bronchiseptica GN=sucC PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.151e-36 Identity = 92/234 (39.32%), Postives = 134/234 (57.26%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 + IHEYQG EL+ ++G+ VP+G+ SVDE A + + VVK+QI AGGRG G GGV + + +EV L+ ++LG LVT QTGPQG+ V ++ + E + E Y I+ DR T ++ S+GG IE++A P I+KV +D G+TD +AA++ G+ A A + +KLYK + ++D +L EINPL T ++A DAK F A FR Sbjct: 1 MKIHEYQGKELLKQFGVTVPRGIPAFSVDEAVAAAEKL--GGPVWVVKAQIHAGGRGKG-------GGVKLGRSIDEVRQLSSEILGMQLVTHQTGPQGQKVRRLLIEEGADIKKEYYVGIVTDRGTQRVCVMASSEGGMDIEEVAAHSPEKILKVFVDPAAGLTDAEAAELARGIGVPEASVGKAAAEFQKLYKAYWDTDASLAEINPLILTGSGDIIALDAKFNFDSNALFR 225
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_ALKOO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Alkaliphilus oremlandii (strain OhILAs) GN=sucC PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.151e-36 Identity = 90/227 (39.65%), Postives = 129/227 (56.83%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF 840 +NIHEYQ EL+ YG+ VP+G + V + ++A + D VVK+QI AGGRG GGV I K EVE + ++LG+ LVT QTG +G++V + + E + E Y A LDR+ + +I +GG IE++A P+ I+K ID G+TD +V L + ND +E +K LY+ F E DC+LLEINPL T +++A DAK+ F Sbjct: 1 MNIHEYQAKELLRDYGVPVPRGQVIYDVRDAQRAAWHIESDIA--VVKAQIHAGGRGKA-------GGVKIAKSITEVEQFSRELLGKTLVTHQTGQEGRVVKAILIEEGCEIYKEYYIAFTLDRENSKIALIASEEGGMDIEEVAANRPDKILKEIIDPLIGLTDFQGRRVCFNLNIDGSLINDTVELMKNLYRCFIEKDCSLLEINPLVITKNNRVMALDAKINF 218
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_MESSB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mesorhizobium sp. (strain BNC1) GN=sucC PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.809e-36 Identity = 96/237 (40.51%), Postives = 132/237 (55.70%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +NIHEYQ EL+ YG V +G+A+ + E + A + + VVKSQI AGGRG G FK KGGV + K EEV A +MLG LVTKQTGP+GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P I+ + I G+T++D K+ L A D LYK F E D +LLE+NPL +L DAKV F A FR Sbjct: 1 MNIHEYQAKELLRGYGAPVAQGVAIFTSGEAEAAAKKL--PGPLYVVKSQIHAGGRGKGKFKELSPDAKGGVRLAKSIEEVVANAKEMLGNTLVTKQTGPEGKQVNRLYIEDGADIARELYLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKILTLAIAPERGVTNDDVTKLNAALKLDGAAAKDGETLFPILYKAFTEKDMSLLEVNPLIVMQNGRLRVLDAKVSFDNNALFR 235
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_PELLD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pelodictyon luteolum (strain DSM 273) GN=sucC PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.669e-36 Identity = 86/236 (36.44%), Postives = 136/236 (57.63%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFP--DHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 +NIHEYQG +++ K+G+ VPKG+ S +E K+A + +F D +V+K+QI AGGRG GGV + K EE ++A +MLG LVT QTGP+GK V ++ + E +++ E Y I LDR T+ +++ ++GG IE +AE+ P +++K+ +D G+ A + L + +A+ + LY + D L EINPL T +++A DAK+ F A +R Sbjct: 1 MNIHEYQGKDILRKFGVAVPKGIVAYSAEEAKQAAEQLFAEQDSPVVVIKAQIHAGGRGKA-------GGVKLAKSPEEAHEIASQMLGTTLVTHQTGPEGKEVRRLLVEEGMNIDREFYVGITLDRATSNNVLMISTEGGMEIEKVAEETPELLLKIQVDARFGLQGFQAREAAFFLGLEGEQFRNAVSFITALYNAYTSIDAALAEINPLVVTKEGRVLALDAKINFDSNALYR 229
BLAST of CN184992 vs. ExPASy Swiss-Prot
Match: SUCC_BURM1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=sucC PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.669e-36 Identity = 94/238 (39.50%), Postives = 141/238 (59.24%), Query Frame = 1 Query: 163 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLEINPLAETSG*QLVAADAKVKF**YAAFR 861 + IHEYQG E++ K+G+ VP+G SVDE K +++ VVK+QI AGGRG G GGV + K E+V + A ++LG LVT QTGP+G+ V+++ + E + E+Y ++++DR + +++G S+GG IE++AEK+P +I KV ++ G+ D A D LA K+ +I Q + LYK F E+D +L EINPL + ++VA DAK F A FR Sbjct: 1 MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEEL--GGPVWVVKAQIHAGGRGKG-------GGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKQELYVSLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDSQA----DDLATKIGVPAASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVVALDAKFNFDSNALFR 225 The following BLAST results are available for this feature:
BLAST of CN184992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184992 ID=CN184992; Name=CN184992; organism=Citrus sinensis; type=EST; length=861bpback to top |