CN184991

Overview
NameCN184991
Unique NameCN184991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN184991_ssr191 microsatellite CN184991_ssr191:191..202. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13771 contig Csv1_Contig13771:15..784. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184991 vs. ExPASy Swiss-Prot
Match: LGMN_RAT (Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.514e-59
Identity = 109/202 (53.96%), Postives = 147/202 (72.77%), Query Frame = 2
Query:  167 GGGGAKVN-DDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEG*NIYATTASN 766
            G G   +  DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE IIV MYDDIA NEENP PGV+IN P+G DVYKGVPKDYTGEDVT ENF AV+ G++ A+ G GSGKV+ SGP DH+F++++DHG  G+L  P +  ++  +L   ++  +    Y+ +VFY+EACESGS+    LP+  ++YATTA+N
Sbjct:   14 GAGAVHIGVDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIIVMMYDDIANNEENPTPGVVINRPNGTDVYKGVPKDYTGEDVTPENFLAVLRGDEEAVKGKGSGKVLKSGPRDHVFVYFTDHGATGILVFP-NEDLHVKDLNKTIRYMYEHKMYQKMVFYIEACESGSMMNH-LPDDIDVYATTAAN 213          
BLAST of CN184991 vs. ExPASy Swiss-Prot
Match: LGMN_HUMAN (Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.583e-59
Identity = 106/200 (53.00%), Postives = 147/200 (73.50%), Query Frame = 2
Query:  170 GGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEG*NIYATTASN 766
            G GA   DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE I+V MYDDIA++E+NP PG++IN P+G DVY+GVPKDYTGEDVT +NF AV+ G+  A+ G GSGKV+ SGP DH+FI+++DHG  G+L  P +  ++  +L + +   +    Y+ +VFY+EACESGS+    LP+  N+YATTA+N
Sbjct:   14 GIGAVPIDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFIYFTDHGSTGILVFP-NEDLHVKDLNETIHYMYKHKMYRKMVFYIEACESGSMMNH-LPDNINVYATTAAN 211          
BLAST of CN184991 vs. ExPASy Swiss-Prot
Match: LGMN_MACFA (Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.406e-59
Identity = 105/200 (52.50%), Postives = 147/200 (73.50%), Query Frame = 2
Query:  170 GGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEG*NIYATTASN 766
            G GA   DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE I+V MYDDIA++E+NP PG++IN P+G DVY+GVPKDYTGEDVT +NF AV+ G+  A+ G GSGKV+ SGP DH+F++++DHG  G+L  P +  ++  +L + +   +    Y+ +VFY+EACESGS+    LP+  N+YATTA+N
Sbjct:   14 GIGAVPIDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFVYFTDHGSTGILVFP-NEDLHVKDLNETIYYMYKHKMYRKMVFYIEACESGSMMNH-LPDNINVYATTAAN 211          
BLAST of CN184991 vs. ExPASy Swiss-Prot
Match: LGMN_PONAB (Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 9.816e-59
Identity = 104/198 (52.53%), Postives = 146/198 (73.74%), Query Frame = 2
Query:  176 GAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEG*NIYATTASN 766
            GA   DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE I+V MYDDIA++E+NP PG++IN P+G DVY+GVPKDYTGEDVT +NF AV+ G+  A+ G GSGKV+ SGP DH+F++ +DHG  G+L  P +  ++ ++L + +   +    Y+ +VFY+EACESGS+    LP+  N+YATTA+N
Sbjct:   16 GAVPIDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFVYSTDHGSTGILVFP-NEDLHVEDLNETIHYMYKHKMYRKMVFYIEACESGSMMNH-LPDNINVYATTAAN 211          
BLAST of CN184991 vs. ExPASy Swiss-Prot
Match: LGMN_MOUSE (Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.187e-58
Identity = 110/202 (54.46%), Postives = 144/202 (71.29%), Query Frame = 2
Query:  167 GGGGAKVN-DDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEG*NIYATTASN 766
            G G   V  DD +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE IIV MYDDIA +EENP PGV+IN P+G DVYKGV KDYTGEDVT ENF AV+ G+  A+ G GSGKV+ SGP DH+FI+++DHG  G+L  P    ++  +L   ++  +    Y+ +VFY+EACESGS+    LP+  N+YATTA+N
Sbjct:   14 GAGAVPVGVDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIIVMMYDDIANSEENPTPGVVINRPNGTDVYKGVLKDYTGEDVTPENFLAVLRGDAEAVKGKGSGKVLKSGPRDHVFIYFTDHGATGILVFPNDD-LHVKDLNKTIRYMYEHKMYQKMVFYIEACESGSMMNH-LPDDINVYATTAAN 213          
BLAST of CN184991 vs. ExPASy Swiss-Prot
Match: LGMN_BOVIN (Legumain OS=Bos taurus GN=LGMN PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.386e-57
Identity = 104/200 (52.00%), Postives = 146/200 (73.00%), Query Frame = 2
Query:  170 GGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTG-GSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEG*NIYATTASN 766
            G GA   +D +  G  W V++AGSNG++NYRHQAD CHAYQ++ + G+ DE IIV MYDDIA +E+NP PG++IN P+G DVY+GV KDYTGEDVT +NF AV+ G+  A+ G GSGKV+ SGP DH+F++++DHG  G+L  P +  ++  +L + ++  +    Y+ +VFY+EACESGS+   L P+  N+YATTA+N
Sbjct:   14 GTGAVPLEDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIVHRNGIPDEQIIVMMYDDIANSEDNPTPGIVINRPNGSDVYQGVLKDYTGEDVTPKNFLAVLRGDAEAVKGVGSGKVLKSGPRDHVFVYFTDHGATGILVFP-NEDLHVKDLNETIRYMYEHKMYQKMVFYIEACESGSMMNHLPPD-INVYATTAAN 211          
BLAST of CN184991 vs. ExPASy Swiss-Prot
Match: HGLB_SCHMA (Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3)

HSP 1 Score: 194.512 bits (493), Expect = 5.398e-49
Identity = 96/196 (48.98%), Postives = 133/196 (67.86%), Query Frame = 2
Query:  182 KVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEG*NIYATTASNA 769
            +V+D+  S   +WAVL+AGSNG+ NYRHQAD+CHAY +LR  G+K E+II  MYDDIA+N  NP PG + N  +  D Y+GV  DY G++V  + F  V+ G+K+A     GKV+ SG ND +FI+++DHG PG++  P    +YA E +  LK  H+   Y  LV Y+EA ESGS+F+ +LP   +IYATTA+N+
Sbjct:   26 EVSDETVSDNNKWAVLVAGSNGYPNYRHQADVCHAYHVLRSKGIKPEHIITMMYDDIAYNLMNPFPGKLFNDYNHKDWYEGVVIDYRGKNVNSKTFLKVLKGDKSA----GGKVLKSGKNDDVFIYFTDHGAPGLIAFPDDE-LYAKEFMSTLKYLHSHKRYSKLVIYIEANESGSMFQQILPSNLSIYATTAANS 216          
BLAST of CN184991 vs. ExPASy Swiss-Prot
Match: HGLB_SCHJA (Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.398e-49
Identity = 99/183 (54.10%), Postives = 122/183 (66.67%), Query Frame = 2
Query:  215 RWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFEGLLPEG*NIYATTAS 763
            +WAVL+AGSNGF NYRHQAD+CHAY +L   G+K E+II FMYDDIA N+ENP PG I N     D YKGV  DY G+ V  + F  V+ G+K A     GKV+ SG ND +FI+++DHG PG+L  P    ++A   I+ LK       Y  LV Y+EACESGS+F GLLP   NIYATTA+
Sbjct:   31 KWAVLVAGSNGFENYRHQADVCHAYHVLLSKGVKPEHIITFMYDDIAHNKENPFPGKIFNDYRHKDYYKGVVIDYKGKKVNPKTFLQVLKGDKRA----GGKVLKSGKNDDVFIYFTDHGAPGILAFPDDD-LHAKPFINTLKYLRQHRRYSKLVIYVEACESGSMFAGLLPTDINIYATTAA 208          
BLAST of CN184991 vs. ExPASy Swiss-Prot
Match: GPI8_DROME (Putative GPI-anchor transamidase OS=Drosophila melanogaster GN=CG4406 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.088e-23
Identity = 62/174 (35.63%), Postives = 97/174 (55.75%), Query Frame = 2
Query:  218 WAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVV-DSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFE 718
            WAVL+  S  ++NYRH A++   Y+ +++ G+ D  II+ + DD+A N  NPRPG + N+       +GDD    V  DY G +VTVENF  ++ G     T  S K++ D+G N  + I+ + HGG G L    S  I + EL D +++      Y  L F ++ C++ S++E
Sbjct:   47 WAVLVDASRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIADDMACNARNPRPGQVYNNANQHINVYGDD----VEVDYRGYEVTVENFVRLLTGRTQNGTARSKKLLSDAGSN--VLIYLTGHGGDGFLKFQDSEEITSQELADGIQQMWEKKRYNELFFMVDTCQAASLYE 214          
BLAST of CN184991 vs. ExPASy Swiss-Prot
Match: GPI8_MOUSE (GPI-anchor transamidase OS=Mus musculus GN=Pigk PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.253e-21
Identity = 70/224 (31.25%), Postives = 110/224 (49.11%), Query Frame = 2
Query:   65 ITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHP------HGDDVYKGVPKDYTGEDVTVENFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIFE 718
            +  L ALA ++ GS   AG I     +A +FF +G                WAVL+  S  ++NYRH A+    Y+ +++ G+ D +I++ + DD+A N  NP+P  + +H       +GDD    V  DY   +VTVENF  V+ G     T  S +++ S    +I I+ + HGG G L    S  I   EL D  ++      Y  L+F ++ C+  S++E
Sbjct:   11 VATLAALALLSLGS-SAAGHI---EDQAEQFFRSGHTN------------NWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNARNPKPATVFSHKNMELNVYGDD----VEVDYRSYEVTVENFLRVLTGRVPPSTPRSKRLL-SDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNELLFIIDTCQGASMYE 213          
The following BLAST results are available for this feature:
BLAST of CN184991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
LGMN_RAT1.514e-5953.96Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1[more]
LGMN_HUMAN2.583e-5953.00Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1[more]
LGMN_MACFA4.406e-5952.50Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1[more]
LGMN_PONAB9.816e-5952.53Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1[more]
LGMN_MOUSE2.187e-5854.46Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1[more]
LGMN_BOVIN5.386e-5752.00Legumain OS=Bos taurus GN=LGMN PE=1 SV=1[more]
HGLB_SCHMA5.398e-4948.98Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3[more]
HGLB_SCHJA5.398e-4954.10Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=... [more]
GPI8_DROME5.088e-2335.63Putative GPI-anchor transamidase OS=Drosophila mel... [more]
GPI8_MOUSE1.253e-2131.25GPI-anchor transamidase OS=Mus musculus GN=Pigk PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006I08_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006I08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184991 ID=CN184991; Name=CN184991; organism=Citrus sinensis; type=EST; length=770bp
GAGGCTCCAGCAACCAATCAACCCCCTTCAAAAAACCATGACGCGCCTTG
CCTCCGGCGTGCTAATCACGCTCCTAGTCGCTCTTGCAGGAATCGCCGAT
GGAAGCAGAGACATAGCAGGTGACATTCTGAAGCTACCATCGGAAGCCTA
TAGGTTCTTCCATAATGGTGGGGGAGGGGCAAAGGTCAACGATGATGATG
ATTCTGTCGGCACGAGATGGGCCGTCCTGCTTGCCGGATCTAATGGCTTC
TGGAATTACAGGCATCAGGCTGATATTTGTCATGCTTATCAACTCTTGAG
GAAAGGTGGGCTGAAGGATGAAAATATTATTGTTTTCATGTATGATGACA
TCGCTTTCAATGAAGAGAACCCAAGGCCTGGAGTCATCATTAACCACCCC
CATGGCGATGATGTTTACAAAGGAGTTCCAAAGGATTACACGGGGGAAGA
TGTTACTGTTGAAAACTTTTTTGCTGTTGTCCTGGGAAATAAAACAGCTC
TTACAGGGGGCAGTGGGAAGGTTGTGGATAGCGGCCCCAATGATCATATT
TTCATATTCTACTCAGATCATGGTGGCCCTGGGGTGCTAGGGATGCCCAC
CAGTCGATACATATATGCTGATGAACTGATCGATGTCTTAAAAAAGAAGC
ATGCTTCTGGGAACTACAAAAGCTTGGTATTTTATCTCGAAGCCTGTGAA
TCTGGAAGTATCTTTGAGGGTCTTCTTCCTGAGGGCTAAAATATCTATGC
AACCACAGCTTCAAATGCTG
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