CN184969

Overview
NameCN184969
Unique NameCN184969
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length739
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN184969 vs. ExPASy Swiss-Prot
Match: TAS_ECOLI (Protein tas OS=Escherichia coli (strain K12) GN=tas PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11
Identity = 50/167 (29.94%), Postives = 80/167 (47.90%), Query Frame = -2 
Query:  265 DTMGELKKLVEEGKIKYIGLSEASADTIRR------AHAVHPITAVQMEYSLWTREIEDDIIPLCRELGIGIVAYSPLGRGFFAGKAVVESLPS---ESILAMHPRFSGENLEKNKLLYTRLETLAAKYGCTTPQLALAWLLHQGDDIVPIPGTTKITNLDNNIGSL 738
            DT+  L +    GKI+YIG+S  +A  + R       H +  I  +Q  YSL  R  E  +  + +  G+ ++AYS LG G   GK +  + P+    ++ +   R+SGE  +K    Y     +A ++G    Q+ALA++  Q      + G T +  L  NI SL
Sbjct:  159 DTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYV---DIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESL 322
The following BLAST results are available for this feature:
BLAST of CN184969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
TAS_ECOLI9.252e-1129.94Protein tas OS=Escherichia coli (strain K12) GN=ta... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006H13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006H13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184969 ID=CN184969; Name=CN184969; organism=Citrus sinensis; type=EST; length=739bp
GTAATGTACGAATCAAGCATTTACACGAATATTTCTTGCTTAATTCTCAA
TAAACTACACATAAGAAGGAAGCAAGAGATGAAATGACATGCCTCCATAG
TTCCACACCTCAGTTTAATCCACTTGGAATATTTACTTTCTAGGAGTATT
TGCAAATTTGTACCCATAACCAGACAAATTACTGTAGTCTCTATGGCCAC
CAACTTCGTCAACAGGAATGGTCTTGCAAATTTCTTTCAAGTCCTCTTCT
TTAAGCTTCAGCGCCAAAGAACCAATGTTGTTATCAAGGTTTGTAATCTT
AGTTGTCCCGGGAATAGGGACTATGTCATCCCCTTGATGGAGAAGCCACG
CCAAAGCTAATTGAGGGGTAGTACACCCATACTTTGCAGCCAAGGTTTCC
AAACGCGTATATAAAAGTTTGTTCTTCTCCAAGTTCTCTCCACTGAACCT
AGGATGCATTGCCAAAATACTCTCACTGGGCAAGCTTTCCACAACTGCCT
TCCCAGCAAAGAAACCTCGACCAAGAGGGCTATATGCCACTATGCCAATA
CCGAGCTCTCTGCAGAGAGGAATTATATCATCTTCGATTTCACGAGTCCA
CAGCGAGTATTCCATTTGTACAGCTGTTATGGGATGGACAGCATGGGCTC
TTCTTATTGTGTCTGCACTGGCTTCAGACAACCCAATATATTTTATCTTT
CCCTCCTCTACTAGCTTCTTGAGTTCCCCCATCGTATCC
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