CN184967
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184967 vs. ExPASy Swiss-Prot
Match: SUCD_ECOL6 (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli O6 GN=sucD PE=3 SV=2) HSP 1 Score: 245.743 bits (626), Expect = 1.884e-64 Identity = 127/212 (59.91%), Postives = 153/212 (72.17%), Query Frame = 1 Query: 1 EAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGSAMLEVFK 636 ++I+EA++A + L++ ITEGIP DM+ VK L+ ++ R+IGPNCPG+I PGECKIGI PG+IHKPG+VGIVSRSGTLTYEAV QTT G GQSTCVGIGGDP G+NF+D LE F DPQT +AAA IKE T KPVV +IAG+TAP G+RMGHAGAI++GGKGTA +K L AGV V S A IG A+ V K Sbjct: 80 DSILEAIDAGIKLIITITEGIPTLDMLTVKVKLD-EAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVT-KPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 289
BLAST of CN184967 vs. ExPASy Swiss-Prot
Match: SUCD_ECO57 (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli O157:H7 GN=sucD PE=3 SV=2) HSP 1 Score: 245.743 bits (626), Expect = 1.884e-64 Identity = 127/212 (59.91%), Postives = 153/212 (72.17%), Query Frame = 1 Query: 1 EAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGSAMLEVFK 636 ++I+EA++A + L++ ITEGIP DM+ VK L+ ++ R+IGPNCPG+I PGECKIGI PG+IHKPG+VGIVSRSGTLTYEAV QTT G GQSTCVGIGGDP G+NF+D LE F DPQT +AAA IKE T KPVV +IAG+TAP G+RMGHAGAI++GGKGTA +K L AGV V S A IG A+ V K Sbjct: 80 DSILEAIDAGIKLIITITEGIPTLDMLTVKVKLD-EAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVT-KPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK 289
BLAST of CN184967 vs. ExPASy Swiss-Prot
Match: SUCD_PSEAE (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Pseudomonas aeruginosa GN=sucD PE=3 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 5.481e-64 Identity = 126/210 (60.00%), Postives = 151/210 (71.90%), Query Frame = 1 Query: 1 EAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGSAMLEV 630 ++I+EA + L+VCITEGIP DM+ K + RLIGPNCPG+I PGECKIGIMPG+IH PG+VGIVSRSGTLTYEAV QTT G GQSTCVGIGGDP G+NF+D L+ F DPQT +AAA IK + T KPVV++IAG+TAPPG+RMGHAGAI+SGGKGTA +K L++AGV V S A IG A+ E+ Sbjct: 80 DSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDELG-VRLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTCVGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAFIKANVT-KPVVSYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAEL 287
BLAST of CN184967 vs. ExPASy Swiss-Prot
Match: SUCD_AQUAE (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Aquifex aeolicus GN=sucD PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.155e-60 Identity = 117/213 (54.93%), Postives = 150/213 (70.42%), Query Frame = 1 Query: 1 EAIMEAMEAELDLVVCITEGIPQHDMVRVKA-ALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGSAMLEVFK 636 +AI+EA++A ++LVVCITEGIP DM+ VK L +L+GPNCPG+I PGE K+GIMPG+I K G++GIVSRSGTLTYEA +Q T GLGQST VGIGGDP +G D +E F DP+T +AA I E +KPV A+IAG+TAPPG+RMGHAGAI+ GGKGTA+ K++ L +AG V+E+PAKIG + ++ K Sbjct: 80 DAIVEALDAGIELVVCITEGIPVKDMMMVKDYMLKNYPNAKLVGPNCPGVITPGEAKVGIMPGHIFKRGKIGIVSRSGTLTYEAAYQLTKYGLGQSTAVGIGGDPVHGLTHRDVIEMFNKDPETEAILMIGEIGGTEEEEAAEYI-EKEVDKPVFAYIAGITAPPGKRMGHAGAIIMGGKGTAKAKMEALEKAGAYVIENPAKIGETVAKILK 291
BLAST of CN184967 vs. ExPASy Swiss-Prot
Match: SUCA2_TRIVA (Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial OS=Trichomonas vaginalis GN=ALPHA-SCS2 PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 7.666e-58 Identity = 119/217 (54.84%), Postives = 147/217 (67.74%), Query Frame = 1 Query: 4 AIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPG-ECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIKES--GTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGSAMLEVFKQRG 645 A +EA EA + LVVCITE IPQHDM++VK + +++ +LIGPNCPG+I+PG K+GI+P I + G++GIVSRSGTLTYEA + TT GLGQST VGIGGDPF G D +++F DPQT DAA I ++ EKPVVAFIAG TAPPG+RMGHAGAIVSGGKGTA+ K K L AGV + P +G + E K+ G Sbjct: 92 ACIEAAEAGMGLVVCITEHIPQHDMIKVKKVM-KETGCQLIGPNCPGLIQPGTHTKLGIIPTNIFRNGKIGIVSRSGTLTYEAAYATTQAGLGQSTVVGIGGDPFAGQLHTDVIKRFAADPQTEGIILIGEIGGTSEEDAAEWIAKTKLTQEKPVVAFIAGATAPPGKRMGHAGAIVSGGKGTAEGKYKALEAAGVRIARHPGNMGKFIFEEMKRLG 307
BLAST of CN184967 vs. ExPASy Swiss-Prot
Match: SUCA3_TRIVA (Succinyl-CoA ligase [GDP-forming] subunit alpha-3, mitochondrial OS=Trichomonas vaginalis GN=ALPHA-SCS3 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.308e-57 Identity = 118/217 (54.38%), Postives = 147/217 (67.74%), Query Frame = 1 Query: 4 AIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPG-ECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIKES--GTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGSAMLEVFKQRG 645 A +EA +A + LVVCITE IPQHDM++VK + +++ +LIGPNCPG+I+PG K+GI+P I G++GIVSRSGTLTYEA + TT+ GLGQST VGIGGDPF G D +++F DPQT DAA I ++ EKPVVAFIAG TAPPG+RMGHAGAIVSGGKGTA+ K K L AGV + P +G + E K+ G Sbjct: 92 ACIEAAQAGMGLVVCITEHIPQHDMIKVKKVM-KETGCQLIGPNCPGLIQPGTHTKLGIIPTNIFNNGKIGIVSRSGTLTYEAAYATTLAGLGQSTVVGIGGDPFAGQLHTDVVKRFAADPQTEGIILIGEIGGTSEEDAAEWIAKTKLTQEKPVVAFIAGATAPPGKRMGHAGAIVSGGKGTAEGKYKALEAAGVRIARHPGNMGKFIFEEMKRMG 307
BLAST of CN184967 vs. ExPASy Swiss-Prot
Match: SUCA1_TRIVA (Succinyl-CoA ligase [GDP-forming] subunit alpha-1, mitochondrial OS=Trichomonas vaginalis GN=ALPHA-SCS1 PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.969e-57 Identity = 118/217 (54.38%), Postives = 146/217 (67.28%), Query Frame = 1 Query: 4 AIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPG-ECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIKES--GTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGSAMLEVFKQRG 645 A +EA EA + LVVCITE IPQHDM++VK + +++ +LIGPNCPG+I+PG K+GI+P I G++GIVSRSGTLTYEA + TT+ GLGQST VGIGGDPF G D +++F DPQT DAA I ++ EKPVVA IAG TAPPG+RMGHAGAIVSGGKGTA+ K K L AGV + P +G + E K+ G Sbjct: 92 ACIEAAEAGMGLVVCITEHIPQHDMIKVKKVM-KETGCQLIGPNCPGLIQPGTHTKLGIIPTNIFNNGKIGIVSRSGTLTYEAAYATTLAGLGQSTVVGIGGDPFAGQLHTDVVKRFAADPQTEGIILIGEIGGTSEEDAAEWIAKTKLTQEKPVVASIAGATAPPGKRMGHAGAIVSGGKGTAEGKYKALEAAGVRIARHPGNMGKFIFEEMKRMG 307
BLAST of CN184967 vs. ExPASy Swiss-Prot
Match: MTKB_METEA (Malate--CoA ligase subunit alpha OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=mtkB PE=3 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 4.813e-52 Identity = 107/213 (50.23%), Postives = 141/213 (66.20%), Query Frame = 1 Query: 1 EAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNR---QSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGSAMLEV 630 +AIMEA +A L LV IT+GIP DM+RVK L R + +T ++GPNC GII PG+ +GIMPG+I+ PG+VG++SRSGTL YEA Q +G+G ST VGIGGDP NG++F+D L F DP+T +A+A IKE+ KPV+ F+AGLTAP GRRMGHAGAI+S +A +K + +R G+TV P GS + +V Sbjct: 80 DAIMEAADAGLKLVCSITDGIPAQDMMRVKRYLRRYPKEKRTMVVGPNCAGIISPGKSMLGIMPGHIYLPGKVGVISRSGTLGYEAAAQMKELGIGISTSVGIGGDPINGSSFLDHLALFEQDPETEAVLMIGEIGGPQEAEASAWIKEN-FSKPVIGFVAGLTAPKGRRMGHAGAIISATGDSAAEKAEIMRSYGLTVAPDPGSFGSTVADV 291
BLAST of CN184967 vs. ExPASy Swiss-Prot
Match: SUCD2_ARCFU (Succinyl-CoA ligase [ADP-forming] subunit alpha 2 OS=Archaeoglobus fulgidus GN=sucD2 PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 6.285e-52 Identity = 107/210 (50.95%), Postives = 137/210 (65.24%), Query Frame = 1 Query: 1 EAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGSAMLEV 630 +A+MEA +A + ++VCITEGIP HD +++ + T LIGPNCPGII PG+ +GIMP I KPG VGIVSRSGTLTY+ + T +GLGQST VGIGGD GT+FV+ L F D +T AA I+E KPVV ++AGLTAPPG+RMGHAGAI+ GG GTA+ KIK L AG V ++P ++ + E+ Sbjct: 80 DAVMEAADAGIKVIVCITEGIPVHDELKMYWRVKEAGAT-LIGPNCPGIISPGKTHLGIMPVQIFKPGNVGIVSRSGTLTYQIAYNLTKLGLGQSTVVGIGGDRIIGTDFVEVLRLFEDDKETKAVVLVGEIGGRDEEVAAEFIRE--MSKPVVGYVAGLTAPPGKRMGHAGAIIEGGVGTAESKIKALEAAGARVGKTPMEVAELVAEI 286
BLAST of CN184967 vs. ExPASy Swiss-Prot
Match: SUCA_YEAST (Succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Saccharomyces cerevisiae GN=LSC1 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 9.076e-51 Identity = 110/217 (50.69%), Postives = 138/217 (63.59%), Query Frame = 1 Query: 4 AIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPG-ECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIKESGTEK----PVVAFIAGLTA--PPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGSAMLEVF 633 AI E++EAE+ L VCITEGIPQHDM+ + L Q KTRL+GPNCPGII P + +IGI P I + G++GI+SRSGTLTYEAV QTT LGQS +G+GGD F GT+F+D L+ FL D T +AA +KE + PV +FIAG A G RMGH+GAIV G A+ K + LR+ GV VVESP +G A+L+ F Sbjct: 109 AIKESIEAEIPLAVCITEGIPQHDMLYIAEMLQTQDKTRLVGPNCPGIINPATKVRIGIQPPKIFQAGKIGIISRSGTLTYEAVQQTTKTDLGQSLVIGMGGDAFPGTDFIDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSRSKPMPVASFIAGTVAGQMKGVRMGHSGAIVEGSGTDAESKKQALRDVGVAVVESPGYLGQALLDQF 325 The following BLAST results are available for this feature:
BLAST of CN184967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184967 ID=CN184967; Name=CN184967; organism=Citrus sinensis; type=EST; length=736bpback to top |