CN184966

Overview
NameCN184966
Unique NameCN184966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_ECOK1 (Phosphoserine aminotransferase OS=Escherichia coli O1:K1 / APEC GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.893e-29
Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            ++FNF++GPA LP +VL +AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLN+P  Y VLF  GG   QFAAVPLN+       DY+  G W+  A KEA+K   P
Sbjct:    3 QIFNFSSGPAMLPAEVLEQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTP 116
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_ECO5E (Phosphoserine aminotransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.893e-29
Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            ++FNF++GPA LP +VL +AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLN+P  Y VLF  GG   QFAAVPLN+       DY+  G W+  A KEA+K   P
Sbjct:    3 QIFNFSSGPAMLPVEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTP 116
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_ECO57 (Phosphoserine aminotransferase OS=Escherichia coli O157:H7 GN=serC PE=3 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 7.893e-29
Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            ++FNF++GPA LP +VL +AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLN+P  Y VLF  GG   QFAAVPLN+       DY+  G W+  A KEA+K   P
Sbjct:    3 QIFNFSSGPAMLPVEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTP 116
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_ECO45 (Phosphoserine aminotransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.893e-29
Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            ++FNF++GPA LP +VL +AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLN+P  Y VLF  GG   QFAAVPLN+       DY+  G W+  A KEA+K   P
Sbjct:    3 QIFNFSSGPAMLPAEVLEQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTP 116
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_SALTY (Phosphoserine aminotransferase OS=Salmonella typhimurium GN=serC PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.346e-28
Identity = 63/114 (55.26%), Postives = 74/114 (64.91%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            +VFNF++GPA LP +VL  AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLNIP  Y VLF  GG   QFA VPLNL       DY+  G W+  A KEA+K   P
Sbjct:    3 QVFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYCAP 116
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_SALTI (Phosphoserine aminotransferase OS=Salmonella typhi GN=serC PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.346e-28
Identity = 63/114 (55.26%), Postives = 74/114 (64.91%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            +VFNF++GPA LP +VL  AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLNIP  Y VLF  GG   QFA VPLNL       DY+  G W+  A KEA+K   P
Sbjct:    3 QVFNFSSGPAMLPAEVLKLAQQELRDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYCAP 116
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_SALSV (Phosphoserine aminotransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=serC PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.346e-28
Identity = 63/114 (55.26%), Postives = 74/114 (64.91%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            +VFNF++GPA LP +VL  AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLNIP  Y VLF  GG   QFA VPLNL       DY+  G W+  A KEA+K   P
Sbjct:    3 QVFNFSSGPAMLPAEVLKLAQQELRDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYCAP 116
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_SALPC (Phosphoserine aminotransferase OS=Salmonella paratyphi C (strain RKS4594) GN=serC PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.346e-28
Identity = 63/114 (55.26%), Postives = 74/114 (64.91%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            +VFNF++GPA LP +VL  AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLNIP  Y VLF  GG   QFA VPLNL       DY+  G W+  A KEA+K   P
Sbjct:    3 QVFNFSSGPAMLPAEVLKLAQQELRDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYCAP 116
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_SALPB (Phosphoserine aminotransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=serC PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.346e-28
Identity = 63/114 (55.26%), Postives = 74/114 (64.91%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            +VFNF++GPA LP +VL  AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLNIP  Y VLF  GG   QFA VPLNL       DY+  G W+  A KEA+K   P
Sbjct:    3 QVFNFSSGPAMLPAEVLKLAQQELRDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYCAP 116
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_SALNS (Phosphoserine aminotransferase OS=Salmonella newport (strain SL254) GN=serC PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.346e-28
Identity = 63/114 (55.26%), Postives = 74/114 (64.91%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            +VFNF++GPA LP +VL  AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLNIP  Y VLF  GG   QFA VPLNL       DY+  G W+  A KEA+K   P
Sbjct:    3 QVFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYCAP 116
The following BLAST results are available for this feature:
BLAST of CN184966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_ECOK17.893e-2953.51Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO5E7.893e-2953.51Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO577.893e-2953.51Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO457.893e-2953.51Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_SALTY1.346e-2855.26Phosphoserine aminotransferase OS=Salmonella typhi... [more]
SERC_SALTI1.346e-2855.26Phosphoserine aminotransferase OS=Salmonella typhi... [more]
SERC_SALSV1.346e-2855.26Phosphoserine aminotransferase OS=Salmonella schwa... [more]
SERC_SALPC1.346e-2855.26Phosphoserine aminotransferase OS=Salmonella parat... [more]
SERC_SALPB1.346e-2855.26Phosphoserine aminotransferase OS=Salmonella parat... [more]
SERC_SALNS1.346e-2855.26Phosphoserine aminotransferase OS=Salmonella newpo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006H10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184966 ID=CN184966; Name=CN184966; organism=Citrus sinensis; type=EST; length=652bp
GAGGAAAAAAAGGAAAAGAGAAATAAAGGCACTTGTCTCTCTTTCAACTA
GCAGCTGCTAAGCCATGGCAACGACGACATCATCACCTCACTCACTGTTT
CTCCAGAACCGTAATAGCCACCCACTCAATAAAAACAATCTCGCATCTTT
CACCAACCTTAAAAAGATCAATTTTTTTAACACCAAAAGAGCCATTTCAG
TCACCTGCTCCGCCGCATCAGCACCAACCCAAGATCGAACGGCGGCCCAG
ATCCAATCCGGGCAAGAAGACCGGGTCTTCAACTTCGCTGCGGGCCCCGC
TAATCTCCCGGAGAAAGTTCTACTCAAGGCCCAATCGGAGCTTTACAACT
GGCGCGGATCTGGCATGAGCGTGATGGAAATGAGCCATAGAGGTAAAGAA
TTCAAGTCCATTATTGAAAAAGCTGAATCGGATCTTAGAGCCCTCTTGAA
TATTCCCCAAGAATATTCTGTTTTGTTCTTGCAAGGCGGCGCTACGACAC
AGTTCGCCGCCGTTCCATTGAATTTGTGTACACCTAATGACCCGGTCGAT
TATATCGTCACCGGGTCGTGGAGTGACAAAGCTTTTAAAGAAGCGCAAAA
AATTTTGCAACCCACAAGTGATTTGGTCTGGGAAAAAGCTGAAAAGAACA
CA
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