CN184966

Overview
NameCN184966
Unique NameCN184966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_STRSV (Phosphoserine aminotransferase OS=Streptococcus sanguinis (strain SK36) GN=serC PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.999e-28
Identity = 63/110 (57.27%), Postives = 82/110 (74.55%), Query Frame = 2
Query:  275 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKI 604
            ++NF+AGPA LP++VL KAQ+E  ++  SGMSVME+SHR KEF  II++AES LR L++IP  Y VLFLQGGA+TQF+ +PLNL        Y+V GSW  KA+ EA K+
Sbjct:    3 IYNFSAGPAVLPKEVLKKAQAEFLDYAQSGMSVMELSHRSKEFDDIIKEAESLLRELMDIPDNYRVLFLQGGASTQFSMIPLNL-AQGGKAYYLVAGSWGKKAYTEAVKL 111          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_KLEP3 (Phosphoserine aminotransferase OS=Klebsiella pneumoniae (strain 342) GN=serC PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.999e-28
Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 2
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            +V+NF++GPA LP +VL  AQ EL +W G G SVME+SHRGKEF  + E+AE D R+LLNIP  Y VLF  GG   QFA +PLN+    +  DY+  G W+  A KEA+K   P
Sbjct:    3 QVYNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRSLLNIPSNYKVLFCHGGGRGQFAGIPLNILGDKNVADYVDAGYWAASAVKEAKKYCAP 116          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_ENT38 (Phosphoserine aminotransferase OS=Enterobacter sp. (strain 638) GN=serC PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.999e-28
Identity = 62/114 (54.39%), Postives = 74/114 (64.91%), Query Frame = 2
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            +VFNF++GPA LP  VL +AQ EL +W+G G SVME+SHRGKEF  + E+AE D R LLNIP  Y VLF  GG   QFA +PLNL       DY+  G W+  A KEA K   P
Sbjct:    3 QVFNFSSGPAMLPVDVLKQAQQELCDWQGLGTSVMEISHRGKEFIQVAEEAEKDFRDLLNIPSNYKVLFCHGGGRGQFAGIPLNLLGDKTGADYVDAGYWAASAVKEAHKYCTP 116          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_STRTD (Phosphoserine aminotransferase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=serC PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.116e-28
Identity = 63/110 (57.27%), Postives = 79/110 (71.82%), Query Frame = 2
Query:  275 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKI 604
            ++NF+AGPA LP+ VL KAQ+EL N++ SGMSV+EMSHR  EF  II+ AE+ LR L+ IP  Y V+FLQGGA+TQF  VPLNL        Y+V GSW  KA+ EA K+
Sbjct:    3 IYNFSAGPATLPKPVLEKAQAELLNYQDSGMSVLEMSHRSPEFDKIIKDAEATLRELMAIPDNYKVIFLQGGASTQFTMVPLNL-AQGKKAYYLVGGSWGKKAYTEAVKL 111          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_STRT2 (Phosphoserine aminotransferase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=serC PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.116e-28
Identity = 63/110 (57.27%), Postives = 79/110 (71.82%), Query Frame = 2
Query:  275 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKI 604
            ++NF+AGPA LP+ VL KAQ+EL N++ SGMSV+EMSHR  EF  II+ AE+ LR L+ IP  Y V+FLQGGA+TQF  VPLNL        Y+V GSW  KA+ EA K+
Sbjct:    3 IYNFSAGPATLPKPVLEKAQAELLNYQDSGMSVLEMSHRSPEFDKIIKDAEATLRELMAIPDNYKVIFLQGGASTQFTMVPLNL-AQGKKAYYLVGGSWGKKAYTEAVKL 111          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_STRT1 (Phosphoserine aminotransferase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=serC PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.116e-28
Identity = 63/110 (57.27%), Postives = 79/110 (71.82%), Query Frame = 2
Query:  275 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKI 604
            ++NF+AGPA LP+ VL KAQ+EL N++ SGMSV+EMSHR  EF  II+ AE+ LR L+ IP  Y V+FLQGGA+TQF  VPLNL        Y+V GSW  KA+ EA K+
Sbjct:    3 IYNFSAGPATLPKPVLEKAQAELLNYQDSGMSVLEMSHRSPEFDKIIKDAEATLRELMAIPDNYKVIFLQGGASTQFTMVPLNL-AQGKKAYYLVGGSWGKKAYTEAVKL 111          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_DROME (Probable phosphoserine aminotransferase OS=Drosophila melanogaster GN=CG11899 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.116e-28
Identity = 62/107 (57.94%), Postives = 72/107 (67.29%), Query Frame = 2
Query:  275 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEA 595
            V NFAAGPA LPE+VL + Q  L N  GSG+SVMEMSHR   +  I +   SDLR LLN+P  Y +L +QGG T QFAAV LNL       DY++TGSWS KA KEA
Sbjct:    2 VINFAAGPAKLPEEVLKEVQENLVNCNGSGISVMEMSHRSSNYAKIHDATISDLRELLNVPSNYKILLMQGGGTGQFAAVALNLIGKTGTADYVITGSWSAKAAKEA 108          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_DICDI (Probable phosphoserine aminotransferase OS=Dictyostelium discoideum GN=serC PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.116e-28
Identity = 60/113 (53.10%), Postives = 84/113 (74.34%), Query Frame = 2
Query:  266 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT--PNDPVDYIVTGSWSDKAFKEAQ 598
            E RV NF AGP  +P +VLL+AQ EL N++G G S+ME+SHRGKEF+ +I + +S+L+ LL+I  +Y +LFLQGGA++ FA +P+NLC     D VD+IVTGSWS +A  + +
Sbjct:    7 EFRVNNFGAGPGCIPTEVLLEAQKELLNFQGCGKSIMEVSHRGKEFEGVINETKSNLKKLLSISDDYDILFLQGGASSLFAGIPMNLCENGVEDIVDFIVTGSWSKQASNDGK 119          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_COXBN (Phosphoserine aminotransferase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=serC PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.116e-28
Identity = 58/114 (50.88%), Postives = 79/114 (69.30%), Query Frame = 2
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            RV+NF+AGPA +PE+VL   + EL +W G GMS+ E+SHRG+EF  + E+AE DLR LL +P+ Y +LFLQGG+  QFA VP+NL   +    YI +G WS+ A +EA+    P
Sbjct:    3 RVYNFSAGPAAIPEEVLFTVRDELLDWHGIGMSIAEVSHRGEEFIGVAEEAERDLRELLAVPESYHILFLQGGSRLQFAMVPMNLLANHKKAVYIDSGVWSNLAIREAKNYCDP 116          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_COXB2 (Phosphoserine aminotransferase OS=Coxiella burnetii (strain CbuG_Q212) GN=serC PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.116e-28
Identity = 58/114 (50.88%), Postives = 79/114 (69.30%), Query Frame = 2
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            RV+NF+AGPA +PE+VL   + EL +W G GMS+ E+SHRG+EF  + E+AE DLR LL +P+ Y +LFLQGG+  QFA VP+NL   +    YI +G WS+ A +EA+    P
Sbjct:    3 RVYNFSAGPAAIPEEVLFTVRDELLDWHGIGMSIAEVSHRGEEFIGVAEEAERDLRELLAVPESYHILFLQGGSRLQFAMVPMNLLANHKKAVYIDSGVWSNLAIREAKNYCDP 116          
The following BLAST results are available for this feature:
BLAST of CN184966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_STRSV2.999e-2857.27Phosphoserine aminotransferase OS=Streptococcus sa... [more]
SERC_KLEP32.999e-2852.63Phosphoserine aminotransferase OS=Klebsiella pneum... [more]
SERC_ENT382.999e-2854.39Phosphoserine aminotransferase OS=Enterobacter sp.... [more]
SERC_STRTD5.116e-2857.27Phosphoserine aminotransferase OS=Streptococcus th... [more]
SERC_STRT25.116e-2857.27Phosphoserine aminotransferase OS=Streptococcus th... [more]
SERC_STRT15.116e-2857.27Phosphoserine aminotransferase OS=Streptococcus th... [more]
SERC_DROME5.116e-2857.94Probable phosphoserine aminotransferase OS=Drosoph... [more]
SERC_DICDI5.116e-2853.10Probable phosphoserine aminotransferase OS=Dictyos... [more]
SERC_COXBN5.116e-2850.88Phosphoserine aminotransferase OS=Coxiella burneti... [more]
SERC_COXB25.116e-2850.88Phosphoserine aminotransferase OS=Coxiella burneti... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006H10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184966 ID=CN184966; Name=CN184966; organism=Citrus sinensis; type=EST; length=652bp
GAGGAAAAAAAGGAAAAGAGAAATAAAGGCACTTGTCTCTCTTTCAACTA
GCAGCTGCTAAGCCATGGCAACGACGACATCATCACCTCACTCACTGTTT
CTCCAGAACCGTAATAGCCACCCACTCAATAAAAACAATCTCGCATCTTT
CACCAACCTTAAAAAGATCAATTTTTTTAACACCAAAAGAGCCATTTCAG
TCACCTGCTCCGCCGCATCAGCACCAACCCAAGATCGAACGGCGGCCCAG
ATCCAATCCGGGCAAGAAGACCGGGTCTTCAACTTCGCTGCGGGCCCCGC
TAATCTCCCGGAGAAAGTTCTACTCAAGGCCCAATCGGAGCTTTACAACT
GGCGCGGATCTGGCATGAGCGTGATGGAAATGAGCCATAGAGGTAAAGAA
TTCAAGTCCATTATTGAAAAAGCTGAATCGGATCTTAGAGCCCTCTTGAA
TATTCCCCAAGAATATTCTGTTTTGTTCTTGCAAGGCGGCGCTACGACAC
AGTTCGCCGCCGTTCCATTGAATTTGTGTACACCTAATGACCCGGTCGAT
TATATCGTCACCGGGTCGTGGAGTGACAAAGCTTTTAAAGAAGCGCAAAA
AATTTTGCAACCCACAAGTGATTTGGTCTGGGAAAAAGCTGAAAAGAACA
CA
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