CN184966

Overview
NameCN184966
Unique NameCN184966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_STRMK (Phosphoserine aminotransferase OS=Stenotrophomonas maltophilia (strain K279a) GN=serC PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.627e-32
Identity = 63/108 (58.33%), Postives = 80/108 (74.07%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEA 595
            R FNF+AGPA LPE VL +AQ+E+ +W GSG S++EMSHRG EF S+  +AE+DLR LL+IP +Y+VLFL GGATTQ A +PLN   P    DY+V+G W   A K+A
Sbjct:    3 RAFNFSAGPATLPESVLRQAQAEMLDWHGSGASIVEMSHRGAEFMSVAAEAEADLRRLLDIPDDYAVLFLSGGATTQQALIPLNFAAPGQRADYVVSGHWGKTAVKQA 110
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_PSEAE (Phosphoserine aminotransferase OS=Pseudomonas aeruginosa GN=serC PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.627e-32
Identity = 66/110 (60.00%), Postives = 82/110 (74.55%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQK 601
            R FNF AGPA LP+ VL +AQ+EL +WRG G+SVMEMSHR  ++ +I  KAE DLR LL+IP +Y VLFLQGGA+ QFA +PLNL   +   DYI TG WS KA +EA++
Sbjct:    4 RAFNFCAGPAALPDAVLQRAQAELLDWRGKGLSVMEMSHRSDDYVAIASKAEQDLRDLLDIPSDYKVLFLQGGASQQFAEIPLNLLPEDGVADYIDTGIWSKKAIEEARR 113
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_PSEAB (Phosphoserine aminotransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=serC PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.627e-32
Identity = 66/110 (60.00%), Postives = 82/110 (74.55%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQK 601
            R FNF AGPA LP+ VL +AQ+EL +WRG G+SVMEMSHR  ++ +I  KAE DLR LL+IP +Y VLFLQGGA+ QFA +PLNL   +   DYI TG WS KA +EA++
Sbjct:    4 RAFNFCAGPAALPDAVLQRAQAELLDWRGKGLSVMEMSHRSDDYVAIASKAEQDLRDLLDIPSDYKVLFLQGGASQQFAEIPLNLLPEDGVADYIDTGIWSKKAIEEARR 113
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_PSEA8 (Phosphoserine aminotransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=serC PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.627e-32
Identity = 66/110 (60.00%), Postives = 82/110 (74.55%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQK 601
            R FNF AGPA LP+ VL +AQ+EL +WRG G+SVMEMSHR  ++ +I  KAE DLR LL+IP +Y VLFLQGGA+ QFA +PLNL   +   DYI TG WS KA +EA++
Sbjct:    4 RAFNFCAGPAALPDAVLQRAQAELLDWRGKGLSVMEMSHRSDDYVAIASKAEQDLRDLLDIPSDYKVLFLQGGASQQFAEIPLNLLPEDGVADYIDTGIWSKKAIEEARR 113
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_BURVG (Phosphoserine aminotransferase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=serC PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.627e-32
Identity = 67/114 (58.77%), Postives = 83/114 (72.81%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            RVFNF+AGPA LPE+VL +A  E+ +W GSGMSVMEMSHRGKEF SI E A +DLR LL++P  + +LFLQGG   + A VP+NL       D++VTGSWS K+F EA+K   P
Sbjct:    2 RVFNFSAGPAALPEEVLRQAADEMLDWHGSGMSVMEMSHRGKEFMSIHETALADLRELLDVPASHRILFLQGGGIAENAIVPMNLLGWRKSADFVVTGSWSQKSFNEAKKYCTP 115
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_BURCJ (Phosphoserine aminotransferase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=serC PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.627e-32
Identity = 66/114 (57.89%), Postives = 83/114 (72.81%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            RVFNF+AGPA +PE+VL +A  E+ +W GSGMSVMEMSHRGKEF SI E A +DLR LL +P  + +LFLQGG   + A VP+NL    +  D++VTGSWS K+F EA+K   P
Sbjct:    2 RVFNFSAGPAAMPEEVLRQAADEMLDWHGSGMSVMEMSHRGKEFMSIHEAALTDLRDLLGVPASHRILFLQGGGIAENAIVPMNLLGARNTADFVVTGSWSQKSFGEAKKFCTP 115
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_BURA4 (Phosphoserine aminotransferase OS=Burkholderia ambifaria (strain MC40-6) GN=serC PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.627e-32
Identity = 67/114 (58.77%), Postives = 83/114 (72.81%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            RVFNF+AGPA LPE+VL +A  E+ +W GSGMSVMEMSHRGKEF SI E A +DLR LL++P  + +LFLQGG   + A VP+NL       D++VTGSWS K+F EA+K   P
Sbjct:    2 RVFNFSAGPAALPEEVLRQAADEMLDWHGSGMSVMEMSHRGKEFMSIHEAALADLRELLDVPASHRILFLQGGGIAENAIVPMNLLGSRKTADFVVTGSWSQKSFNEAKKYGTP 115
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_PSEA7 (Phosphoserine aminotransferase OS=Pseudomonas aeruginosa (strain PA7) GN=serC PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.961e-32
Identity = 66/110 (60.00%), Postives = 82/110 (74.55%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQK 601
            R FNF AGPA LP+ VL +AQ+EL +WRG G+SVMEMSHR  ++ +I  KAE DLR LL+IP +Y VLFLQGGA+ QFA +PLNL   +   DYI TG WS KA +EA++
Sbjct:    4 RAFNFCAGPAALPDAVLQRAQAELLDWRGKGLSVMEMSHRSDDYVAIASKAEHDLRDLLDIPSDYKVLFLQGGASQQFAEIPLNLLPEDGVADYIDTGIWSKKAIEEARR 113
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_POLNA (Phosphoserine aminotransferase OS=Polaromonas naphthalenivorans (strain CJ2) GN=serC PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.301e-31
Identity = 66/110 (60.00%), Postives = 85/110 (77.27%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQK 601
            R FNF+AGPANLPE+VL +A +E+ +W GSGMSVMEMSHRGKEF SI E AE+D R L+ IP+ + +LF+QGG   + A VPLN+ +     D++VTGSWSDK+ KEA+K
Sbjct:    3 RPFNFSAGPANLPEEVLRQAAAEMLDWHGSGMSVMEMSHRGKEFISIYEHAEADFRELMEIPEHFKILFMQGGGLAENAIVPLNI-SRGGLADFVVTGSWSDKSQKEARK 111
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_BURP8 (Phosphoserine aminotransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=serC PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.301e-31
Identity = 66/110 (60.00%), Postives = 83/110 (75.45%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQK 601
            RVFNF+AGPA +PE+VL +A  E+ +W GSGMSVMEMSHRGKEF +I E+A +DLR LL +P  + +LFLQGG   + A VP+NL       D++VTGSWS K+FKEAQK
Sbjct:    2 RVFNFSAGPAAMPEEVLRQAADEMLDWGGSGMSVMEMSHRGKEFMTIHEEALTDLRELLQVPSSHHILFLQGGGLGENAIVPMNLMGRKARADFVVTGSWSQKSFKEAQK 111
The following BLAST results are available for this feature:
BLAST of CN184966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_STRMK7.627e-3258.33Phosphoserine aminotransferase OS=Stenotrophomonas... [more]
SERC_PSEAE7.627e-3260.00Phosphoserine aminotransferase OS=Pseudomonas aeru... [more]
SERC_PSEAB7.627e-3260.00Phosphoserine aminotransferase OS=Pseudomonas aeru... [more]
SERC_PSEA87.627e-3260.00Phosphoserine aminotransferase OS=Pseudomonas aeru... [more]
SERC_BURVG7.627e-3258.77Phosphoserine aminotransferase OS=Burkholderia vie... [more]
SERC_BURCJ7.627e-3257.89Phosphoserine aminotransferase OS=Burkholderia cep... [more]
SERC_BURA47.627e-3258.77Phosphoserine aminotransferase OS=Burkholderia amb... [more]
SERC_PSEA79.961e-3260.00Phosphoserine aminotransferase OS=Pseudomonas aeru... [more]
SERC_POLNA1.301e-3160.00Phosphoserine aminotransferase OS=Polaromonas naph... [more]
SERC_BURP81.301e-3160.00Phosphoserine aminotransferase OS=Burkholderia phy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006H10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184966 ID=CN184966; Name=CN184966; organism=Citrus sinensis; type=EST; length=652bp
GAGGAAAAAAAGGAAAAGAGAAATAAAGGCACTTGTCTCTCTTTCAACTA
GCAGCTGCTAAGCCATGGCAACGACGACATCATCACCTCACTCACTGTTT
CTCCAGAACCGTAATAGCCACCCACTCAATAAAAACAATCTCGCATCTTT
CACCAACCTTAAAAAGATCAATTTTTTTAACACCAAAAGAGCCATTTCAG
TCACCTGCTCCGCCGCATCAGCACCAACCCAAGATCGAACGGCGGCCCAG
ATCCAATCCGGGCAAGAAGACCGGGTCTTCAACTTCGCTGCGGGCCCCGC
TAATCTCCCGGAGAAAGTTCTACTCAAGGCCCAATCGGAGCTTTACAACT
GGCGCGGATCTGGCATGAGCGTGATGGAAATGAGCCATAGAGGTAAAGAA
TTCAAGTCCATTATTGAAAAAGCTGAATCGGATCTTAGAGCCCTCTTGAA
TATTCCCCAAGAATATTCTGTTTTGTTCTTGCAAGGCGGCGCTACGACAC
AGTTCGCCGCCGTTCCATTGAATTTGTGTACACCTAATGACCCGGTCGAT
TATATCGTCACCGGGTCGTGGAGTGACAAAGCTTTTAAAGAAGCGCAAAA
AATTTTGCAACCCACAAGTGATTTGGTCTGGGAAAAAGCTGAAAAGAACA
CA
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