CN184966

Overview
NameCN184966
Unique NameCN184966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_BURCH (Phosphoserine aminotransferase OS=Burkholderia cenocepacia (strain HI2424) GN=serC PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.301e-31
Identity = 66/114 (57.89%), Postives = 82/114 (71.93%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            RVFNF+AGPA +PE+VL +A  E+ +W GSGMSVMEMSHRGKEF SI E A +DLR LL +P  + +LFLQGG   + A VP+NL       D++VTGSWS K+F EA+K   P
Sbjct:    2 RVFNFSAGPAAMPEEVLRQAADEMLDWHGSGMSVMEMSHRGKEFMSIHEAALTDLRDLLGVPASHRILFLQGGGIAENAIVPMNLLGARKTADFVVTGSWSQKSFGEAKKFCAP 115
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_BURCC (Phosphoserine aminotransferase OS=Burkholderia cenocepacia (strain MC0-3) GN=serC PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.301e-31
Identity = 66/114 (57.89%), Postives = 82/114 (71.93%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            RVFNF+AGPA +PE+VL +A  E+ +W GSGMSVMEMSHRGKEF SI E A +DLR LL +P  + +LFLQGG   + A VP+NL       D++VTGSWS K+F EA+K   P
Sbjct:    2 RVFNFSAGPAAMPEEVLRQAADEMLDWHGSGMSVMEMSHRGKEFMSIHEAALTDLRDLLGVPASHRILFLQGGGIAENAIVPMNLLGARKTADFVVTGSWSQKSFGEAKKFCTP 115
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_BURCA (Phosphoserine aminotransferase OS=Burkholderia cenocepacia (strain AU 1054) GN=serC PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.301e-31
Identity = 66/114 (57.89%), Postives = 82/114 (71.93%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            RVFNF+AGPA +PE+VL +A  E+ +W GSGMSVMEMSHRGKEF SI E A +DLR LL +P  + +LFLQGG   + A VP+NL       D++VTGSWS K+F EA+K   P
Sbjct:    2 RVFNFSAGPAAMPEEVLRQAADEMLDWHGSGMSVMEMSHRGKEFMSIHEAALTDLRDLLGVPASHRILFLQGGGIAENAIVPMNLLGARKTADFVVTGSWSQKSFGEAKKFCAP 115
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_POLSJ (Phosphoserine aminotransferase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=serC PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.699e-31
Identity = 67/110 (60.91%), Postives = 84/110 (76.36%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQK 601
            R FNF+AGPANLPE+VL +A +E+ +W GSGMSVMEMSHRGKEF SI E AE+D R L+ IP  + +LF+QGG   + A VPLNL +     D++VTGSWSDK+ KEA+K
Sbjct:    3 RPFNFSAGPANLPEEVLQQAAAEMLDWHGSGMSVMEMSHRGKEFISIYENAEADFRELMAIPPNFKILFMQGGGLAENAIVPLNL-SRGASADFVVTGSWSDKSQKEARK 111
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_NITEU (Phosphoserine aminotransferase OS=Nitrosomonas europaea GN=serC PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.699e-31
Identity = 65/109 (59.63%), Postives = 81/109 (74.31%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQ 598
            +++NF+AGPA LPE+VL +A+ E+ +W GSGMSVMEMSHRGKEF SI ++ ES LR L  IP  Y VLFLQGGA++QFA VP+NL       DY+ TG WS KA  EA+
Sbjct:    3 KIYNFSAGPAVLPEEVLEQAREEMLDWHGSGMSVMEMSHRGKEFMSIADETESALRELAGIPDHYKVLFLQGGASSQFAMVPMNLLGKKGKADYVNTGQWSAKAISEAK 111
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_PSEFS (Phosphoserine aminotransferase OS=Pseudomonas fluorescens (strain SBW25) GN=serC PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.219e-31
Identity = 67/110 (60.91%), Postives = 76/110 (69.09%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQK 601
            R +NF AGPA LPE VL +AQ EL +W G G+SVMEMSHR  EF SI  KAE DLR LL IP  Y VLFLQGGA+ QFA +PLNL   +   DYI TG W  KA +EA +
Sbjct:    4 RAYNFCAGPAALPEAVLQRAQGELLDWHGKGLSVMEMSHRSDEFVSIATKAEQDLRDLLGIPSHYKVLFLQGGASQQFAQIPLNLLPEDGTADYIDTGIWGQKAIEEASR 113
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_LARHH (Phosphoserine aminotransferase OS=Laribacter hongkongensis (strain HLHK9) GN=serC PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.898e-31
Identity = 65/108 (60.19%), Postives = 80/108 (74.07%), Query Frame = 2 
Query:  275 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQ 598
            ++NF+AGPA LP+ VL +AQ EL +W GSGMSVMEMSHRG+EF SI  +AE+DLR LL IP  Y VLFLQGGA +QF+ VP+NL       DY++TG W   A KEA+
Sbjct:    3 IYNFSAGPALLPQDVLREAQRELTDWHGSGMSVMEMSHRGREFMSIHARAEADLRELLQIPDNYRVLFLQGGAHSQFSMVPMNLLRGKTTADYVITGHWGKVAIKEAR 110
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_BURS3 (Phosphoserine aminotransferase OS=Burkholderia sp. (strain 383) GN=serC PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.898e-31
Identity = 66/114 (57.89%), Postives = 82/114 (71.93%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            RVFNF+AGPA +PE+VL +A  E+ +W GSGMSVMEMSHRGKEF SI E A +DLR LL +P  + +LFLQGG   + A VP+NL       D++VTGSWS K+F EA+K   P
Sbjct:    2 RVFNFSAGPAAMPEEVLRQAADEMLDWHGSGMSVMEMSHRGKEFMSIHEAALTDLRDLLGVPASHRILFLQGGGIAENAIVPMNLLGSRKTADFVVTGSWSQKSFTEAKKYGTP 115
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_BACHK (Phosphoserine aminotransferase OS=Bacillus thuringiensis subsp. konkukian GN=serC PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.785e-31
Identity = 65/112 (58.04%), Postives = 84/112 (75.00%), Query Frame = 2 
Query:  269 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKI 604
            +RV+NF+AGP+ LP  VL K Q EL N+ G+GMS+MEMSHR   F+SII++A S LR L+NIP EY VLFLQGGA+ QF+ +PLNL        Y++TGSWS KA +EA+K+
Sbjct:    2 ERVYNFSAGPSILPLPVLEKVQKELVNYNGTGMSIMEMSHRSSYFQSIIDEAGSLLRELMNIPDEYEVLFLQGGASLQFSMIPLNLMNTYKKAGYVLTGSWSKKALQEAEKV 113
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_BACAA (Phosphoserine aminotransferase OS=Bacillus anthracis (strain A0248) GN=serC PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.785e-31
Identity = 65/112 (58.04%), Postives = 84/112 (75.00%), Query Frame = 2 
Query:  269 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKI 604
            +RV+NF+AGP+ LP  VL K Q EL N+ G+GMS+MEMSHR   F+SII++A S LR L+NIP EY VLFLQGGA+ QF+ +PLNL        Y++TGSWS KA +EA+K+
Sbjct:    3 ERVYNFSAGPSILPLPVLEKVQKELVNYNGTGMSIMEMSHRSSYFQSIIDEAGSLLRELMNIPDEYEVLFLQGGASLQFSMIPLNLMNTYKKAGYVLTGSWSKKALQEAEKV 114
The following BLAST results are available for this feature:
BLAST of CN184966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_BURCH1.301e-3157.89Phosphoserine aminotransferase OS=Burkholderia cen... [more]
SERC_BURCC1.301e-3157.89Phosphoserine aminotransferase OS=Burkholderia cen... [more]
SERC_BURCA1.301e-3157.89Phosphoserine aminotransferase OS=Burkholderia cen... [more]
SERC_POLSJ1.699e-3160.91Phosphoserine aminotransferase OS=Polaromonas sp. ... [more]
SERC_NITEU1.699e-3159.63Phosphoserine aminotransferase OS=Nitrosomonas eur... [more]
SERC_PSEFS2.219e-3160.91Phosphoserine aminotransferase OS=Pseudomonas fluo... [more]
SERC_LARHH2.898e-3160.19Phosphoserine aminotransferase OS=Laribacter hongk... [more]
SERC_BURS32.898e-3157.89Phosphoserine aminotransferase OS=Burkholderia sp.... [more]
SERC_BACHK3.785e-3158.04Phosphoserine aminotransferase OS=Bacillus thuring... [more]
SERC_BACAA3.785e-3158.04Phosphoserine aminotransferase OS=Bacillus anthrac... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006H10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184966 ID=CN184966; Name=CN184966; organism=Citrus sinensis; type=EST; length=652bp
GAGGAAAAAAAGGAAAAGAGAAATAAAGGCACTTGTCTCTCTTTCAACTA
GCAGCTGCTAAGCCATGGCAACGACGACATCATCACCTCACTCACTGTTT
CTCCAGAACCGTAATAGCCACCCACTCAATAAAAACAATCTCGCATCTTT
CACCAACCTTAAAAAGATCAATTTTTTTAACACCAAAAGAGCCATTTCAG
TCACCTGCTCCGCCGCATCAGCACCAACCCAAGATCGAACGGCGGCCCAG
ATCCAATCCGGGCAAGAAGACCGGGTCTTCAACTTCGCTGCGGGCCCCGC
TAATCTCCCGGAGAAAGTTCTACTCAAGGCCCAATCGGAGCTTTACAACT
GGCGCGGATCTGGCATGAGCGTGATGGAAATGAGCCATAGAGGTAAAGAA
TTCAAGTCCATTATTGAAAAAGCTGAATCGGATCTTAGAGCCCTCTTGAA
TATTCCCCAAGAATATTCTGTTTTGTTCTTGCAAGGCGGCGCTACGACAC
AGTTCGCCGCCGTTCCATTGAATTTGTGTACACCTAATGACCCGGTCGAT
TATATCGTCACCGGGTCGTGGAGTGACAAAGCTTTTAAAGAAGCGCAAAA
AATTTTGCAACCCACAAGTGATTTGGTCTGGGAAAAAGCTGAAAAGAACA
CA
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