CN184966

Overview
NameCN184966
Unique NameCN184966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_YERPA (Phosphoserine aminotransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=serC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.138e-30
Identity = 65/114 (57.02%), Postives = 77/114 (67.54%), Query Frame = 2
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            +V+NF+AGPA LP +VL +A+ EL NW G G SVME+SHR KEF  + E++E DLR LL IP  Y VLF  GGA  QFAAVPLNL    +  DYI  G W+  A KEAQK   P
Sbjct:    3 QVYNFSAGPAMLPVEVLRRAEQELRNWHGLGTSVMEISHRSKEFMQVAEESEKDLRDLLQIPANYKVLFCHGGARAQFAAVPLNLLGDRNSADYIDGGYWAHSAIKEAQKYCTP 116          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_YERP3 (Phosphoserine aminotransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=serC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.138e-30
Identity = 65/114 (57.02%), Postives = 78/114 (68.42%), Query Frame = 2
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            +V+NF+AGPA LP +VL +A+ EL NW G G SVME+SHR KEF  + E++E DLR LL IP  Y VLF  GGA  QFAAVPLNL   ++  DYI  G W+  A KEAQK   P
Sbjct:    3 QVYNFSAGPAMLPVEVLRRAEQELRNWHGLGTSVMEISHRSKEFMQVAEESEKDLRDLLQIPANYKVLFCHGGARAQFAAVPLNLLGDSNSADYIDGGYWAHSAVKEAQKYCTP 116          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_RHOBA (Phosphoserine aminotransferase OS=Rhodopirellula baltica GN=serC PE=3 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 9.323e-30
Identity = 65/138 (47.10%), Postives = 94/138 (68.12%), Query Frame = 2
Query:  239 TAAQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDP-VDYIVTGSWSDKAFKEAQKILQPTSDLVWEKAEKN 649
            T+AQ  +   +RVFNF+AGPA +PE VL + Q E+  + G+G S+ME+SHR K F  ++  AES +R LLN+  +YSV+F+QGGAT QF+A+P NL   +     Y++TGSW  KA KEA+K  +   D++++ AE N
Sbjct:    4 TSAQSSASHPERVFNFSAGPATMPESVLREVQDEMLCYPGAGASIMEISHRDKLFVDVLHDAESTIRELLNVSDDYSVMFMQGGATLQFSAIPANLLRGSGKRAQYVLTGSWGKKAVKEAKK--EGDVDVLFDAAESN 139          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_DELAS (Phosphoserine aminotransferase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=serC PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.323e-30
Identity = 63/111 (56.76%), Postives = 85/111 (76.58%), Query Frame = 2
Query:  269 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQK 601
            +R +NF+AGPA +P +VL +A +E+ +W GSGMSVMEMSHRGKEF SI E+AE+DLR LL +P E+ +LF+QGG   + A VPLNL      VD++++GSWS K+ KEA+K
Sbjct:    2 NRPYNFSAGPAAIPAEVLQQAAAEMLDWHGSGMSVMEMSHRGKEFISIYEQAEADLRELLAVPPEFKILFMQGGGLAENAIVPLNLSRAG-TVDFVLSGSWSQKSAKEARK 111          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_YERE8 (Phosphoserine aminotransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=serC PE=3 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.218e-29
Identity = 65/114 (57.02%), Postives = 77/114 (67.54%), Query Frame = 2
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            +V+NF+AGPA LP +VL +A+ EL NW G G SVME+SHR KEF  + E+AE DLR L+ IP  Y VLF  GGA  QFAAVPLNL   +   DYI  G W+  A KEAQK   P
Sbjct:    3 QVYNFSAGPAMLPVEVLRRAEQELRNWHGLGTSVMEISHRSKEFMQVAEEAEKDLRDLMQIPANYKVLFCHGGARAQFAAVPLNLLGDSRSADYIDGGYWAHSAVKEAQKYCTP 116          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_SODGM (Phosphoserine aminotransferase OS=Sodalis glossinidius (strain morsitans) GN=serC PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.218e-29
Identity = 64/115 (55.65%), Postives = 77/115 (66.96%), Query Frame = 2
Query:  269 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            ++VFNF++GPA LP +VL KA+ EL NW G G SVME+SHR KEF  + + +E DLR LL +P  Y VLF QGGA  QFAAVP+NL       DYI  G W+  A KEAQK   P
Sbjct:    2 NQVFNFSSGPAMLPAEVLRKAEQELCNWHGLGTSVMEISHRSKEFLEVAQSSEQDLRELLAVPDNYKVLFCQGGARAQFAAVPMNLLGEATRADYIDGGYWAHSAIKEAQKYCDP 116          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_AZOVD (Phosphoserine aminotransferase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=serC PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.218e-29
Identity = 63/110 (57.27%), Postives = 77/110 (70.00%), Query Frame = 2
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQK 601
            R FNF AGPA LP  VL +AQ+E  +W+G G+SVMEMSHR  E+ +I  KAE DLR LL IP  Y VLFLQGGA+ QFA +PLNL       DY+ TG WS K+ +EA++
Sbjct:    4 RAFNFCAGPAALPTAVLERAQAEFLDWQGKGLSVMEMSHRSDEYVAIAAKAEQDLRDLLGIPSNYKVLFLQGGASQQFAEIPLNLLPEGGVADYVDTGIWSRKSMEEARR 113          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_ERWT9 (Phosphoserine aminotransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=serC PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.590e-29
Identity = 64/114 (56.14%), Postives = 77/114 (67.54%), Query Frame = 2
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            ++FNF++GPA LP +VL +A+ EL NWRG G SVME+SHR KEF  + E+AE D R LL IP  Y VLF  GGA  QFAAVPLNL   +   DY+  G W+  A KEAQK   P
Sbjct:    3 QIFNFSSGPAMLPVEVLRRAEQELCNWRGLGTSVMEISHRSKEFIQVAEEAEKDFRDLLKIPSNYKVLFCHGGARGQFAAVPLNLLGQHGKADYVDGGYWAASAIKEAQKYCTP 116          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_BAUCH (Phosphoserine aminotransferase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=serC PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.077e-29
Identity = 64/113 (56.64%), Postives = 77/113 (68.14%), Query Frame = 2
Query:  275 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            VFNF++GPA LP +VL +AQ EL NW G G S+ME+SHR  EF+ +  ++E DLR+LLNIP  Y VLF  GGA  QFAAVP+NL   +   DYI  G WS  A KEA K  QP
Sbjct:    4 VFNFSSGPAKLPIEVLQQAQQELCNWHGLGTSIMEISHRSDEFRQVAYESEQDLRSLLNIPDNYQVLFCHGGARAQFAAVPMNLLGKSKIADYIHGGYWSYSAAKEAHKYCQP 116          
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_XYLFT (Phosphoserine aminotransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=serC PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.543e-29
Identity = 60/108 (55.56%), Postives = 75/108 (69.44%), Query Frame = 2
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEA 595
            R+FNF+ GPA LPE VL +AQ+E+  W   G SVME+SHR  EF ++ +  ESDLR LL +P +Y+VLFL GGATTQ A +PLN   P    DY+VTG WS  A K+A
Sbjct:    4 RIFNFSPGPATLPEPVLRQAQAEMLEWNAVGASVMEISHRSAEFIALAKGIESDLRCLLGVPDDYAVLFLSGGATTQQALLPLNFAAPGQTADYVVTGHWSKTALKQA 111          
The following BLAST results are available for this feature:
BLAST of CN184966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_YERPA7.138e-3057.02Phosphoserine aminotransferase OS=Yersinia pestis ... [more]
SERC_YERP37.138e-3057.02Phosphoserine aminotransferase OS=Yersinia pseudot... [more]
SERC_RHOBA9.323e-3047.10Phosphoserine aminotransferase OS=Rhodopirellula b... [more]
SERC_DELAS9.323e-3056.76Phosphoserine aminotransferase OS=Delftia acidovor... [more]
SERC_YERE81.218e-2957.02Phosphoserine aminotransferase OS=Yersinia enteroc... [more]
SERC_SODGM1.218e-2955.65Phosphoserine aminotransferase OS=Sodalis glossini... [more]
SERC_AZOVD1.218e-2957.27Phosphoserine aminotransferase OS=Azotobacter vine... [more]
SERC_ERWT91.590e-2956.14Phosphoserine aminotransferase OS=Erwinia tasmanie... [more]
SERC_BAUCH2.077e-2956.64Phosphoserine aminotransferase OS=Baumannia cicade... [more]
SERC_XYLFT3.543e-2955.56Phosphoserine aminotransferase OS=Xylella fastidio... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006H10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184966 ID=CN184966; Name=CN184966; organism=Citrus sinensis; type=EST; length=652bp
GAGGAAAAAAAGGAAAAGAGAAATAAAGGCACTTGTCTCTCTTTCAACTA
GCAGCTGCTAAGCCATGGCAACGACGACATCATCACCTCACTCACTGTTT
CTCCAGAACCGTAATAGCCACCCACTCAATAAAAACAATCTCGCATCTTT
CACCAACCTTAAAAAGATCAATTTTTTTAACACCAAAAGAGCCATTTCAG
TCACCTGCTCCGCCGCATCAGCACCAACCCAAGATCGAACGGCGGCCCAG
ATCCAATCCGGGCAAGAAGACCGGGTCTTCAACTTCGCTGCGGGCCCCGC
TAATCTCCCGGAGAAAGTTCTACTCAAGGCCCAATCGGAGCTTTACAACT
GGCGCGGATCTGGCATGAGCGTGATGGAAATGAGCCATAGAGGTAAAGAA
TTCAAGTCCATTATTGAAAAAGCTGAATCGGATCTTAGAGCCCTCTTGAA
TATTCCCCAAGAATATTCTGTTTTGTTCTTGCAAGGCGGCGCTACGACAC
AGTTCGCCGCCGTTCCATTGAATTTGTGTACACCTAATGACCCGGTCGAT
TATATCGTCACCGGGTCGTGGAGTGACAAAGCTTTTAAAGAAGCGCAAAA
AATTTTGCAACCCACAAGTGATTTGGTCTGGGAAAAAGCTGAAAAGAACA
CA
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