CN184966

Overview
NameCN184966
Unique NameCN184966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_ECO81 (Phosphoserine aminotransferase OS=Escherichia coli O81 (strain ED1a) GN=serC PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.043e-29
Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            ++FNF++GPA LP +VL +AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLN+P  Y VLF  GG   QFAAVPLN+       DY+  G W+  A KEA+K   P
Sbjct:    3 QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTP 116
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_ECO7I (Phosphoserine aminotransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=serC PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.043e-29
Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            ++FNF++GPA LP +VL +AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLN+P  Y VLF  GG   QFAAVPLN+       DY+  G W+  A KEA+K   P
Sbjct:    3 QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTP 116
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_ECO55 (Phosphoserine aminotransferase OS=Escherichia coli (strain 55989 / EAEC) GN=serC PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.043e-29
Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            ++FNF++GPA LP +VL +AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLN+P  Y VLF  GG   QFAAVPLN+       DY+  G W+  A KEA+K   P
Sbjct:    3 QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTP 116
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_ECO27 (Phosphoserine aminotransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=serC PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.043e-29
Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            ++FNF++GPA LP +VL +AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLN+P  Y VLF  GG   QFAAVPLN+       DY+  G W+  A KEA+K   P
Sbjct:    3 QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTP 116
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_ECO24 (Phosphoserine aminotransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=serC PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.043e-29
Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            ++FNF++GPA LP +VL +AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLN+P  Y VLF  GG   QFAAVPLN+       DY+  G W+  A KEA+K   P
Sbjct:    3 QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTP 116
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_XYLFA (Phosphoserine aminotransferase OS=Xylella fastidiosa GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.893e-29
Identity = 60/108 (55.56%), Postives = 73/108 (67.59%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEA 595
            R+FNF+ GPA LPE VL +AQ E+  W   G SVME+SHR  EF  + +  ESDLR LL +P +Y+VLFL GGATTQ A +PLN   P    DY+VTG WS  A K+A
Sbjct:    4 RIFNFSPGPATLPEPVLRQAQDEMLEWNAVGASVMEISHRTVEFMELAKGIESDLRCLLGVPDDYAVLFLSGGATTQQALLPLNFAAPGQTADYVVTGHWSKTALKQA 111
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_SHIB3 (Phosphoserine aminotransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.893e-29
Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            ++FNF++GPA LP +VL +AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLN+P  Y VLF  GG   QFAAVPLN+       DY+  G W+  A KEA+K   P
Sbjct:    3 QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAATAIKEAKKYCTP 116
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_RALSO (Phosphoserine aminotransferase OS=Ralstonia solanacearum GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.893e-29
Identity = 64/114 (56.14%), Postives = 85/114 (74.56%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLN----LCTPNDPVDYIVTGSWSDKAFKEAQK 601
            RV+NF+AGPA LP +VL +A+ E+ +W+GSGMSVMEMSHRG+EF+SI+ +A +DLR LL +P  Y +LFLQGGA  + A VPLN    L       DY+VTG+WS K+ +EA+K
Sbjct:   14 RVYNFSAGPAVLPTEVLEQAREEMLSWQGSGMSVMEMSHRGREFESIMAQAFADLRELLAVPDNYEILFLQGGAIAENAIVPLNLMRRLSLDAPKADYVVTGTWSVKSQQEARK 127
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_ESCF3 (Phosphoserine aminotransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.893e-29
Identity = 62/114 (54.39%), Postives = 75/114 (65.79%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            +VFNF++GPA LP  VL +AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLN+P  Y VLF  GG   QFAAVPLN+       DY+  G W+  A KEA+K   P
Sbjct:    3 QVFNFSSGPAMLPADVLKQAQQELCDWNGLGTSVMEISHRGKEFIKVAEEAEHDFRELLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTP 116
[Close]
BLAST of CN184966 vs. ExPASy Swiss-Prot
Match: SERC_ECOUT (Phosphoserine aminotransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=serC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.893e-29
Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 2 
Query:  272 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWSDKAFKEAQKILQP 613
            ++FNF++GPA LP +VL +AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLN+P  Y VLF  GG   QFAAVPLN+       DY+  G W+  A KEA+K   P
Sbjct:    3 QIFNFSSGPAMLPAEVLEQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTP 116
The following BLAST results are available for this feature:
BLAST of CN184966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_ECO816.043e-2953.51Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO7I6.043e-2953.51Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO556.043e-2953.51Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO276.043e-2953.51Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO246.043e-2953.51Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_XYLFA7.893e-2955.56Phosphoserine aminotransferase OS=Xylella fastidio... [more]
SERC_SHIB37.893e-2953.51Phosphoserine aminotransferase OS=Shigella boydii ... [more]
SERC_RALSO7.893e-2956.14Phosphoserine aminotransferase OS=Ralstonia solana... [more]
SERC_ESCF37.893e-2954.39Phosphoserine aminotransferase OS=Escherichia ferg... [more]
SERC_ECOUT7.893e-2953.51Phosphoserine aminotransferase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006H10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184966 ID=CN184966; Name=CN184966; organism=Citrus sinensis; type=EST; length=652bp
GAGGAAAAAAAGGAAAAGAGAAATAAAGGCACTTGTCTCTCTTTCAACTA
GCAGCTGCTAAGCCATGGCAACGACGACATCATCACCTCACTCACTGTTT
CTCCAGAACCGTAATAGCCACCCACTCAATAAAAACAATCTCGCATCTTT
CACCAACCTTAAAAAGATCAATTTTTTTAACACCAAAAGAGCCATTTCAG
TCACCTGCTCCGCCGCATCAGCACCAACCCAAGATCGAACGGCGGCCCAG
ATCCAATCCGGGCAAGAAGACCGGGTCTTCAACTTCGCTGCGGGCCCCGC
TAATCTCCCGGAGAAAGTTCTACTCAAGGCCCAATCGGAGCTTTACAACT
GGCGCGGATCTGGCATGAGCGTGATGGAAATGAGCCATAGAGGTAAAGAA
TTCAAGTCCATTATTGAAAAAGCTGAATCGGATCTTAGAGCCCTCTTGAA
TATTCCCCAAGAATATTCTGTTTTGTTCTTGCAAGGCGGCGCTACGACAC
AGTTCGCCGCCGTTCCATTGAATTTGTGTACACCTAATGACCCGGTCGAT
TATATCGTCACCGGGTCGTGGAGTGACAAAGCTTTTAAAGAAGCGCAAAA
AATTTTGCAACCCACAAGTGATTTGGTCTGGGAAAAAGCTGAAAAGAACA
CA
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