DC887594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H33C_DICDI (Histone H3.3 type c OS=Dictyostelium discoideum GN=H3c PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.478e-23 Identity = 57/76 (75.00%), Postives = 59/76 (77.63%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLI+KLPFQRLVREIAQ+FKTDLRF VGLFEDTNLCAIHAKRVTIM KDIQLARRIRGERA Sbjct: 61 LLIKKLPFQRLVREIAQEFKTDLRFQAAAIEALQEATEAYLVGLFEDTNLCAIHAKRVTIMVKDIQLARRIRGERA 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H33B_DICDI (Histone H3.3 type b OS=Dictyostelium discoideum GN=H3b PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.478e-23 Identity = 57/76 (75.00%), Postives = 59/76 (77.63%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLI+KLPFQRLVREIAQ+FKTDLRF VGLFEDTNLCAIHAKRVTIM KDIQLARRIRGERA Sbjct: 61 LLIKKLPFQRLVREIAQEFKTDLRFQAAAIQALQEASEAYLVGLFEDTNLCAIHAKRVTIMVKDIQLARRIRGERA 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H31_LODEL (Histone H3.1/H3.2 OS=Lodderomyces elongisporus GN=HHT1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.105e-22 Identity = 56/76 (73.68%), Postives = 58/76 (76.32%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF VGLFEDTNLCAIHAKRVTI KDIQLARR+RGER+ Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAVEAYLVGLFEDTNLCAIHAKRVTIQKKDIQLARRLRGERS 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H31_CANAL (Histone H3.1/H3.2 OS=Candida albicans GN=HHT1 PE=3 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 2.462e-22 Identity = 55/76 (72.37%), Postives = 58/76 (76.32%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF VGLFEDTNLCAIHAKRVTI KD+QLARR+RGER+ Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAVEAYLVGLFEDTNLCAIHAKRVTIQKKDMQLARRLRGERS 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H33_LODEL (Histone H3.3 OS=Lodderomyces elongisporus GN=HHT3 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.215e-22 Identity = 55/76 (72.37%), Postives = 58/76 (76.32%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFK+DLRF VGLFEDTNLCAIHAKRVTI KDIQLARR+RGER+ Sbjct: 61 LLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQEAVEAYLVGLFEDTNLCAIHAKRVTIQKKDIQLARRLRGERS 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H33L3_CAEEL (Putative histone H3.3-like type 3 OS=Caenorhabditis elegans GN=his-69 PE=5 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.215e-22 Identity = 55/75 (73.33%), Postives = 57/75 (76.00%), Query Frame = -2 Query: 170 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 394 LL+RKLPFQRLVREIAQD K DLRF VGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGER Sbjct: 52 LLLRKLPFQRLVREIAQDVKQDLRFQSAAIQALQEASEYFLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGER 126
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3_EUPCR (Histone H3 OS=Euplotes crassus PE=3 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 4.199e-22 Identity = 55/76 (72.37%), Postives = 58/76 (76.32%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQ+FK DLRF V LFEDTNLCAIHAKRVTIMPKD+QLARRIRGER+ Sbjct: 61 LLIRKLPFQRLVREIAQEFKGDLRFQSSAVLALQEAAEAYLVSLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERS 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H33_SCHPO (Histone H3.3 OS=Schizosaccharomyces pombe GN=hht3 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 4.199e-22 Identity = 54/76 (71.05%), Postives = 57/76 (75.00%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF V LFEDTNLCAIH KRVTI PKD+QLARR+RGER+ Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQLARRLRGERS 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H31_SCHPO (Histone H3.1/H3.2 OS=Schizosaccharomyces pombe GN=hht1 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 4.199e-22 Identity = 54/76 (71.05%), Postives = 57/76 (75.00%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF V LFEDTNLCAIH KRVTI PKD+QLARR+RGER+ Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQLARRLRGERS 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H31_PICST (Histone H3.1/H3.2 OS=Pichia stipitis GN=HHT1 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.484e-22 Identity = 55/76 (72.37%), Postives = 57/76 (75.00%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF V LFEDTNLCAIHAKRVTI KDIQLARR+RGER+ Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLCAIHAKRVTIQKKDIQLARRLRGERS 136 The following BLAST results are available for this feature:
BLAST of DC887594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887594 ID=DC887594; Name=DC887594; organism=Citrus sinensis; type=EST; length=395bpback to top |