DC887594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3_YEAST (Histone H3 OS=Saccharomyces cerevisiae GN=HHT1 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 1.764e-20 Identity = 53/76 (69.74%), Postives = 56/76 (73.68%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF V LFEDTNL AIHAKRVTI KDI+LARR+RGER+ Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3_KLULA (Histone H3 OS=Kluyveromyces lactis GN=HHT1 PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 1.764e-20 Identity = 53/76 (69.74%), Postives = 56/76 (73.68%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF V LFEDTNL AIHAKRVTI KDI+LARR+RGER+ Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3_CANGA (Histone H3 OS=Candida glabrata GN=HHT1 PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 1.764e-20 Identity = 53/76 (69.74%), Postives = 56/76 (73.68%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF V LFEDTNL AIHAKRVTI KDI+LARR+RGER+ Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3_ASHGO (Histone H3 OS=Ashbya gossypii GN=HHT1 PE=3 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 1.764e-20 Identity = 53/76 (69.74%), Postives = 56/76 (73.68%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF V LFEDTNL AIHAKRVTI KDI+LARR+RGER+ Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H31_TETTH (Histone H3 OS=Tetrahymena thermophila GN=HHT1 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 3.009e-20 Identity = 51/75 (68.00%), Postives = 56/75 (74.67%), Query Frame = -2 Query: 170 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 394 LLIRKLPFQRLVR+IA +FK +LRF VGLFEDTNLCAIHA+RVTIM KD+QLARRIRGER Sbjct: 61 LLIRKLPFQRLVRDIAHEFKAELRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGER 135
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H31_TETPY (Histone H3 OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 3.009e-20 Identity = 51/75 (68.00%), Postives = 56/75 (74.67%), Query Frame = -2 Query: 170 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 394 LLIRKLPFQRLVR+IA +FK +LRF VGLFEDTNLCAIHA+RVTIM KD+QLARRIRGER Sbjct: 61 LLIRKLPFQRLVRDIAHEFKAELRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGER 135
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3L_MOUSE (Putative histone H3-like OS=Mus musculus PE=5 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 3.930e-20 Identity = 52/76 (68.42%), Postives = 55/76 (72.37%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLI KLPFQRLV+EIAQDFKTDLRF VGLFEDTNLCAIHAK VT++PKDIQLA I GERA Sbjct: 60 LLIHKLPFQRLVQEIAQDFKTDLRFQSAAIGALQEASEANRVGLFEDTNLCAIHAKCVTVIPKDIQLAHSILGERA 135
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3_ENTHI (Histone H3 OS=Entamoeba histolytica GN=H3 PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 6.704e-20 Identity = 51/75 (68.00%), Postives = 55/75 (73.33%), Query Frame = -2 Query: 170 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 394 LL+RK PFQ LVREIAQ K+DLRF VGLFEDTNLCAIHAKR+TIMPKD+QLARRIRGER Sbjct: 60 LLLRKAPFQALVREIAQVSKSDLRFQSAAISALQEAAEAYLVGLFEDTNLCAIHAKRITIMPKDMQLARRIRGER 134
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H33_TETPY (Histone H3.3 OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 8.756e-20 Identity = 50/75 (66.67%), Postives = 55/75 (73.33%), Query Frame = -2 Query: 170 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 394 LLIRKLPFQRLVR+IA + K D+RF VGLFEDTNLCAIHA+RVTIM KD+QLARRIRGER Sbjct: 61 LLIRKLPFQRLVRDIAMEMKNDIRFQSQAILALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGER 135
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3L4_ARATH (Histone H3-like 4 OS=Arabidopsis thaliana GN=At5g12910 PE=2 SV=3) HSP 1 Score: 94.3597 bits (233), Expect = 1.951e-19 Identity = 48/75 (64.00%), Postives = 55/75 (73.33%), Query Frame = -2 Query: 170 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 394 L+IRKLPFQRLV+EIAQ K DLRF VG+FEDTNLCA+HAKR TIMPKDIQLA+R+RG+R Sbjct: 56 LVIRKLPFQRLVKEIAQSLKADLRFQTGAVSALQEAAEAFMVGMFEDTNLCAMHAKRSTIMPKDIQLAKRLRGDR 130 The following BLAST results are available for this feature:
BLAST of DC887594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887594 ID=DC887594; Name=DC887594; organism=Citrus sinensis; type=EST; length=395bpback to top |