DC887594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: CENPA_CANAL (Histone H3-like centromeric protein CSE4 OS=Candida albicans GN=CSE4 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14 Identity = 46/77 (59.74%), Postives = 50/77 (64.94%), Query Frame = -2 Query: 173 LLIRKLPFQRLVREIAQDF---KTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 394 LLIRKLPF RLVREI+ DF LR+ + L EDTNLCAIHAKRVTIM KDIQLARRIRG+ Sbjct: 131 LLIRKLPFARLVREISLDFVGPSYGLRWQSNAILALQEASESFLIHLLEDTNLCAIHAKRVTIMQKDIQLARRIRGQ 207
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H39_STYLE (Histone H3-2 (Fragment) OS=Stylonychia lemnae GN=H3-2 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.467e-14 Identity = 42/62 (67.74%), Postives = 43/62 (69.35%), Query Frame = -2 Query: 209 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMP 394 LLIRKLPFQRLVREIA +FK DLRF VGLFEDTNL AIHAKRVTIMP Sbjct: 53 LLIRKLPFQRLVREIASEFKNDLRFQSSAVLALQEASEAYLVGLFEDTNLAAIHAKRVTIMP 114
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H37_STYLE (Histone H3-7 (Fragment) OS=Stylonychia lemnae GN=H3-7 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.467e-14 Identity = 42/62 (67.74%), Postives = 43/62 (69.35%), Query Frame = -2 Query: 209 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMP 394 LLIRKLPFQRLVREIA +FK DLRF VGLFEDTNL AIHAKRVTIMP Sbjct: 53 LLIRKLPFQRLVREIASEFKNDLRFQSSAVLALQEASEAYLVGLFEDTNLAAIHAKRVTIMP 114
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: CENPA_PICFA (Histone H3-like centromeric protein CSE4 OS=Pichia farinosa GN=CSE4 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.089e-13 Identity = 43/76 (56.58%), Postives = 50/76 (65.79%), Query Frame = -2 Query: 176 LLIRKLPFQRLVREIAQDF---KTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 394 LLIRKLPF RLV+E+A+++ +R+ V L EDTNLCAIHAKRVTIM KDIQLARRIRG Sbjct: 81 LLIRKLPFARLVKEVAENYIGADYGIRWQSNAVLALQEACEAFLVHLLEDTNLCAIHAKRVTIMQKDIQLARRIRG 156
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: CENPA_SCHPO (Histone H3-like centromeric protein cnp1 OS=Schizosaccharomyces pombe GN=cnp1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.563e-13 Identity = 44/79 (55.70%), Postives = 52/79 (65.82%), Query Frame = -2 Query: 176 LLIRKLPFQRLVREIAQDF----KTD--LRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 394 LLI++LPF R+VREI+ +F TD LR+ V LFEDTNLCAIHAKRVTIM +D+QLARRIRG Sbjct: 41 LLIQRLPFSRIVREISSEFVANFSTDVGLRWQSTALQCLQEAAEAFLVHLFEDTNLCAIHAKRVTIMQRDMQLARRIRG 119
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: CENPA_YEAST (Histone H3-like centromeric protein CSE4 OS=Saccharomyces cerevisiae GN=CSE4 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.354e-12 Identity = 40/77 (51.95%), Postives = 49/77 (63.64%), Query Frame = -2 Query: 173 LLIRKLPFQRLVREIAQDFKT---DLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 394 LLI K+PF RLV+E+ +F T DLR+ VGL E TNL A+HAKR+TIM KD+QLARRIRG+ Sbjct: 151 LLISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLARRIRGQ 227
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: CENPA_DANRE (Histone H3-like centromeric protein A OS=Danio rerio GN=cenpa PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.016e-12 Identity = 39/74 (52.70%), Postives = 46/74 (62.16%), Query Frame = -2 Query: 176 LLIRKLPFQRLVREIAQDFKTD-LRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 394 LL+RK PF RLVRE+ Q F + + + V LF D NLCAIHAKRVT+ P+DIQLARRIRG Sbjct: 68 LLLRKAPFSRLVREVCQMFSREHMMWQGYALMALQEAAEAFMVRLFSDANLCAIHAKRVTLFPRDIQLARRIRG 141
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: CENPA_CANGA (Histone H3-like centromeric protein CSE4 OS=Candida glabrata GN=CSE4 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.939e-12 Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = -2 Query: 173 LLIRKLPFQRLVREIAQDF---KTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 394 LLI+K+PF +LV+E+ ++F DLR+ VGL E TNL A+HAKR+TIM KD+QLARRIRG+ Sbjct: 162 LLIQKIPFAKLVKEVTEEFAGESQDLRWQSMAILALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLARRIRGQ 238
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: CENPA_YARLI (Histone H3-like centromeric protein CSE4 OS=Yarrowia lipolytica GN=CSE4 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.776e-12 Identity = 41/77 (53.25%), Postives = 49/77 (63.64%), Query Frame = -2 Query: 176 LLIRKLPFQRLVREIAQDFKT----DLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 394 LLI KLPF R+VRE+A ++ +L++ V LFED NLCAIHAKRVTIM KD+QLARRIRG Sbjct: 68 LLIAKLPFARVVREVALNYLGSEYGNLQWQSMALLALQEAAEAFLVHLFEDVNLCAIHAKRVTIMQKDMQLARRIRG 144
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: CENPA_TETTH (Histone H3-like centromeric protein CNA1 OS=Tetrahymena thermophila GN=CNA1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.497e-11 Identity = 38/77 (49.35%), Postives = 47/77 (61.04%), Query Frame = -2 Query: 170 LLIRKLPFQRLVREIAQDFKTD--LRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 394 LLIRKLPFQRL+REI+ + LR+ V FED N CA+HAKRVT+M KD+ LA RIRG++ Sbjct: 100 LLIRKLPFQRLIREISTRMTEEDSLRWTSFALVLLQTVVEDYMVSFFEDANACALHAKRVTLMSKDLALAARIRGQK 176 The following BLAST results are available for this feature:
BLAST of DC887594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887594 ID=DC887594; Name=DC887594; organism=Citrus sinensis; type=EST; length=395bpback to top |