CN184958

Overview
NameCN184958
Unique NameCN184958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:24..664. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184958 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.106e-27
Identity = 63/172 (36.63%), Postives = 98/172 (56.98%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVG 634
            L  NFY  TCP+  DIIR+ +      +  TA + +R  FHDC    CDAS+L+ ST    +E++   +  +    F  I   K A+E  CP  VSC+DI+ ++ RD ++ +GGPY  +  GRRD R S++ +L   LP  +  +S ++++F + G     +VAL G+HS+G
Sbjct:   21 LTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIG 192          
BLAST of CN184958 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.527e-26
Identity = 62/168 (36.90%), Postives = 88/168 (52.38%), Query Frame = 2
Query:  137 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGR 637
            FY  TCP A  I+R  ++   +       S +R  FHDC V  CD SLLLD T    SEK    +    R F  +++IK A+E  CPG+VSC+DIL L+    V   GGP   +  GRRDG  +        LP   + ++ +  +F A+G+    +V+L G+H+ GR
Sbjct:   37 FYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGR 204          
BLAST of CN184958 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.527e-26
Identity = 62/170 (36.47%), Postives = 93/170 (54.71%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVG 634
            L  NFY  +C  AE ++R  V+             LR  FHDC VQ CDAS+L+       +EK    +  +  F  I+  K A+E  CP  VSCADI+ L+ RD V A GGP + + TGRRDG++S A  +   + D + ++  +++ F++ G+    LV L G+H++G
Sbjct:   29 LSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNS---TEKSDPGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIG 195          
BLAST of CN184958 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.527e-26
Identity = 66/167 (39.52%), Postives = 93/167 (55.69%), Query Frame = 2
Query:  137 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GSHSVG 634
            FY  +CP+AE I+   V   ++  K+   ++LR  FHDC V+ CDASLL+D      SEK    +  +R +  I+  K  +E  CP  VSCADI+ L+ RD V   GGP   + TGRRDG +S     +  LP     +S  ++ FAA G++   +V L+ G HSVG
Sbjct:   26 FYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGPNASVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRSNPN--DVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVG 190          
BLAST of CN184958 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.527e-26
Identity = 62/171 (36.26%), Postives = 96/171 (56.14%), Query Frame = 2
Query:  134 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRT 640
            +FY  TCPQ  DI+   +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K A+E+ CP  VSCAD+L ++ ++ +V  GGP   +  GRRD  +   ++    LP  + ++  + +RF  +G+D +  LVAL G H+ G++
Sbjct:   27 SFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKS 197          
BLAST of CN184958 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 3.527e-26
Identity = 69/174 (39.66%), Postives = 100/174 (57.47%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM--DRSFGMRNFRYIENIKEAVERE--CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVG 634
            L  NFY+ +CP  E I+R  V+  +++   TA + LR  FHDC V+ CDAS+LL S     SEK+   D+S     F  +   K+A++R+  C   VSCADIL L+ RD VV  GGP  P++ GRRDGR S    ++  LP  +  +  +   FA  G+    ++AL G+H++G
Sbjct:   25 LQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASP----SEKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIG 194          
BLAST of CN184958 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.606e-26
Identity = 61/172 (35.47%), Postives = 99/172 (57.56%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVG 634
            L ++FY  +CP+  DIIRE +         TA + LR  FHDC    CDAS+L+ ST    +E++   +  +    F  +   K A+E  CP  VSC+DI+ ++ RD +V +GGPY  +  GRRD R S++ ++   LP  +  +S ++++F++ G     +VAL G+H++G
Sbjct:   32 LTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIG 203          
BLAST of CN184958 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.606e-26
Identity = 67/173 (38.73%), Postives = 93/173 (53.76%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTL-SEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGR 637
            L   FY  TCP    I+R  V+   +       S +R  FHDC V  CD SLLLD+   T+ SEK+ +  +   R F  ++NIK AVE  CPGVVSC DIL L+    V   GGP   +  GRRD R +        LP   ++++ + ++F  +G++   LVAL G+H+ GR
Sbjct:   25 LSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVNDLVALSGAHTFGR 197          
BLAST of CN184958 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.606e-26
Identity = 64/181 (35.36%), Postives = 95/181 (52.49%), Query Frame = 2
Query:  107 NEEDPGLVMN----FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVG 634
            N    GL  N    FY  +CP+ + I++  V   +K     A S LR  FHDC V  CD S+LL+ +     EK    +   +R F  IE+IK  +E  CP  VSCADI+ L+ R+ VV  GGP+ P+  GRRD   +  +     LP   +++  +  +F  +G+D   +V L G+H++G
Sbjct:   38 NGHGHGLTSNLNYRFYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVNGCDGSILLNDSEDFKGEKNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIG 218          
BLAST of CN184958 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.015e-26
Identity = 65/171 (38.01%), Postives = 92/171 (53.80%), Query Frame = 2
Query:  125 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVG 634
            L   FY+ +CPQA++I+   ++    +    A S LR  FHDC VQ CDAS+LLD +    SEK        +R F+ I+ IK  +E+ CP  VSCADIL L+ R   +  GGP   L  GRRD R +        +P  N ++  +L  F   G++   LV+L G H++G
Sbjct:   45 LYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIG 215          
The following BLAST results are available for this feature:
BLAST of CN184958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER31_ARATH7.106e-2736.63Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER54_ARATH3.527e-2636.90Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER46_ARATH3.527e-2636.47Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER44_ARATH3.527e-2639.52Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER38_ARATH3.527e-2636.26Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER16_ARATH3.527e-2639.66Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER63_ARATH4.606e-2635.47Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER15_IPOBA4.606e-2638.73Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER10_ARATH4.606e-2635.36Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER9_ARATH6.015e-2638.01Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006H02_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184958 ID=CN184958; Name=CN184958; organism=Citrus sinensis; type=EST; length=641bp
CTTTAGTGAGTGAAGAGTAGAAGAGAAAATGGGTACGAAAGCTGTCTTCT
TGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCTCTGAGGTCTGCTTTG
GCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAATTTTTACAAGGATAC
ATGCCCTCAGGCCGAGGACATTATCAGGGAACAAGTTAAGCTTCTGTACA
AGCGCCACAAGAACACTGCATTTTCTTGGCTTAGAAACATTTTCCATGAC
TGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGGACTCGACAAGAAA
GACCTTGTCTGAGAAGGAGATGGACAGGAGCTTTGGTATGAGGAACTTCA
GGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTGCCCTGGTGTT
GTTTCCTGTGCTGATATCCTTGTCCTGTCCGGTAGAGATGGCGTTGTTGC
GCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATGGTAGAA
AAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAATGACAGC
ATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCCCTGG
ACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTC
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