DC887593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_MOUSE (Ribose-5-phosphate isomerase OS=Mus musculus GN=Rpia PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 6.288e-27 Identity = 76/201 (37.81%), Postives = 115/201 (57.21%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGS-GLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQ--PFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 ST HAV RI E ++Q L +++ IPTS + + + G+ LSDLD +P +DLAIDGADEVD +NL+KG GG L +EK+V G +F+VI D K +LG +P+EV+P + ++ + F G +LR ++ P VTDNGN+++D + + + I GVV+ G+F++MA V + G Sbjct: 99 STIVHAVQRIAERVKQENL-DLICIPTSFQARQLILQYGLTLSDLDQHPEIDLAIDGADEVDAELNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGDRWHKGIPIEVIPMAYVPVSRAVAQKF---GGEVELRMAVNKAGPVVTDNGNFILDWKFDR-VHKWSEVNTAIKMTPGVVDTGLFINMAERVYFGMQDG 294
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_METEP (Ribose-5-phosphate isomerase A OS=Methylobacterium extorquens (strain PA1) GN=rpiA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.212e-27 Identity = 78/201 (38.81%), Postives = 111/201 (55.22%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGD---QPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 STA + +GE +R G + G+PTS+ T GIPL+ L+ P +DL IDGADEVD + L+KG G +LLREK+V A ++ VVI D SK V LG +PVEV + T + ++ GC + D P +TD G+ ++DL L + I D + S + + GVVEHG+FL +A I+A+ G Sbjct: 30 STAAAFIKLLGERVRAG--LKVTGVPTSEATRIACEREGIPLATLEDLPELDLTIDGADEVDGSLRLIKGGGAALLREKIVAVASRRMVVIADASKHVETLG--AFPLPVEVNLFGIGATTRAVEAAVARAGCTGETVRRHDASGAPLLTDGGHAILDLRLGR-IPDPEALSAGLWAVPGVVEHGLFLGIADAAILAAAEG 225
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_BIFLO (Ribose-5-phosphate isomerase A OS=Bifidobacterium longum GN=rpiA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.212e-27 Identity = 80/199 (40.20%), Postives = 113/199 (56.78%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFV-TDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 ST K VD +G ++ L G+ TS++T QA S GI + D+D +D+ IDGADEVD N +KG G +LL EK+V + V IVDESK+V +G +PVEV+P F A ++ FE G LR D V TD N+V+DL+L++ I + +++++ GVVEHG+FL+M VIV G Sbjct: 33 STVKFLVDELGRRHQEEGL-EFTGVTTSRRTQAQAESYGIKIVDIDDVDHIDVTIDGADEVDKNFNGIKGGGAALLWEKIVATNSNQIVWIVDESKVVDTIG--KFPLPVEVIP----FGAGQVIKKFEARGYKPVLRLDADGKEVRTDENNFVVDLHLER-IDHPQELAEDLINTVGVVEHGLFLNMVDKVIVGDPNG 223
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_BIFLD (Ribose-5-phosphate isomerase A OS=Bifidobacterium longum (strain DJO10A) GN=rpiA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.073e-26 Identity = 80/199 (40.20%), Postives = 113/199 (56.78%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFV-TDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 ST K VD +G ++ L G+ TS++T QA S GI + D+D +D+ IDGADEVD N +KG G +LL EK+V + V IVDESK+V +G +PVEV+P F A ++ FE G LR D V TD N+V+DL+L++ I + +++++ GVVEHG+FL+M VIV G Sbjct: 33 STVKFLVDELGRRHQEEGL-EFTGVTTSRRTQVQAESYGIKIVDIDDVDHIDVTIDGADEVDKNFNGIKGGGAALLWEKIVATNSNQIVWIVDESKVVDTIG--KFPLPVEVIP----FGAGQVIKKFEARGYKPVLRLDADGKEVRTDENNFVVDLHLER-IDHPQELAEDLINTVGVVEHGLFLNMVDKVIVGDPNG 223
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_CAEEL (Probable-ribose 5-phosphate isomerase OS=Caenorhabditis elegans GN=rpia-1 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.829e-26 Identity = 70/196 (35.71%), Postives = 104/196 (53.06%), Query Frame = -2 Query: 19 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIG--DLKVASDNILRLAGVVEHGMFLDMATTVIVA 600 ST K+ V+ + + + G L +I+ +PTS T + + G+P+SDLDS+P +D+ IDGADEVD +KG GG L +EK+V A K F VI D K HLG +P+EV+P + + + E C + P VTDNGN++ID +K++ D + G+VE G+F+ V A Sbjct: 42 STVKYLVEYLKQGFQNGSLKDIICVPTSFLTKQWLIESGLPVSDLDSHPELDVCIDGADEVDGQFTCIKGGGGCLAQEKIVQTAAKNFYVIADYLKDSKHLGDRYPNVPIEVLPLAAQPLLRSIPRA-EGGSCQLRQAVKKCGPIVTDNGNFIIDWQFEKNVSGRDWFAIQQRLANTPGIVETGLFIGCVDAVFFA 236
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_LACBA (Ribose-5-phosphate isomerase A OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=rpiA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.121e-26 Identity = 76/199 (38.19%), Postives = 116/199 (58.29%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTG-DQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 ST ++ +D +GE ++ L +I+G+ TS ++ +QA SLGI + +LD +DL IDGADE+D +KG G + L EK+V K + IVDESK+V HLG +P+EV+P+ ++L + G R T + +TD+ NY+IDL+L + I ++ + + GVVEHG+FLD TVIV + G Sbjct: 30 STVRYMIDALGERVKNEGL-HIIGVATSDRSAKQAESLGITIKELDEVDHLDLTIDGADEIDDNFQGIKGGGAAHLWEKIVAINSTKNMWIVDESKMVHHLG--AFPLPLEVIPFGSSHVLEKLNKM----GFNPSFRMTDTGEHVLTDSKNYIIDLHLGR-IDHPHDLANTLNGIVGVVEHGLFLDTVNTVIVGRQDG 220
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_LACC3 (Ribose-5-phosphate isomerase A OS=Lactobacillus casei (strain ATCC 334) GN=rpiA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.952e-26 Identity = 78/198 (39.39%), Postives = 115/198 (58.08%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 ST + V+ I + ++ L N+ G+ TS +T +QA SLGIP+ LD +DL IDGADEVD +KG G S L EK+V + + IVDE+KLV LG +P+EV+P+ +RL D E +L G + +TD+ NY+IDL+L K I + ++ + + G+VEHG+FLD+ TV+V + G Sbjct: 30 STVVYLVEAIAQRIKDEHL-NLTGVATSVRTRKQAESLGIPMKALDEVGQIDLTIDGADEVDKHFQGIKGGGRSHLIEKIVAINSARNIWIVDETKLVDTLG--KFPLPLEVIPFGSGKLLQRLAD--EGLKPAYRLNEDGSKA-LTDSKNYIIDLHLGK-IEHPHLLAEWLNKQVGIVEHGLFLDLVKTVVVGTTHG 220
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_HALWD (Ribose-5-phosphate isomerase A OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpiA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.023e-25 Identity = 70/200 (35.00%), Postives = 111/200 (55.50%), Query Frame = -2 Query: 7 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLR--TTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELG 600 STA A+D +G+ + G +I G+PTS T ++A+ GIPL+ +++ +D+AIDG+DE++ + L+KG G + REK++ +F+V+ DESKLV L +PV +P K RL L G LR T D P +TDNGN V D I + + + ++ + G V HG+F+++A + +E G Sbjct: 34 STAAAAIDALGDAVAAGY--DIHGVPTSFATRDRAIEAGIPLTRIEAVDHIDVAIDGSDEINNNLTLIKGGGAAHAREKVIDATADQFIVVADESKLVETLSE---PVPVSTLPMAQKPVKHRLDSL----GATTTLRSATMKDGPVITDNGNIVFDCAF-GHIENAEALAKSLAEIPGTVAHGLFVNLADVACIGTENG 223
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_PICTO (Ribose-5-phosphate isomerase A OS=Picrophilus torridus GN=rpiA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.450e-25 Identity = 73/191 (38.22%), Postives = 110/191 (57.59%), Query Frame = -2 Query: 28 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTV 600 STA + ++ + EL++ G I GIPTSKK+ E S IP+ + +D+ DGADE DP+ NL+KG GG+L+REK+V ++F V+VD SK L +PVEV+P+ + T + ++ L GC A R D+ F++DNGNY+ID +L+ I + GVVE G+F ++T + Sbjct: 29 STAYYFIEGLSELVKNG--LRITGIPTSKKSEELCRSFNIPVDY--NIKDIDIDFDGADEFDPYGNLIKGGGGALVREKIVAYNSREFYVLVDHSKYSERL--HKFPLPVEVLPFMSEKTLENIERL----GCRASFR--DDKKFISDNGNYIIDCVFSYTDPELE---SQIKMIPGVVEVGIFRHLSTKI 204
BLAST of DC887593 vs. ExPASy Swiss-Prot
Match: RPIA_METTH (Ribose-5-phosphate isomerase A OS=Methanobacterium thermoautotrophicum GN=rpiA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.450e-25 Identity = 75/201 (37.31%), Postives = 113/201 (56.22%), Query Frame = -2 Query: 4 STAKHAVDRIGELLRQGKLTNIVGIPTSKKTHEQAVSLGIPLSDLDSYPVVDLAIDGADEVDPFMNLVKGRGGSLLREKMVVGACKKFVVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTT--GDQPFVTDNGNYVIDLYLKKDIGDLKVASDNILRLAGVVEHGMFLDMATTVIVASELGV 600 ST + ++ +G +R+ L ++G+PTS ++ A GI ++ L + V D+A+DGADEVDP +NL+KG G + EK+V + F+VIVDESKLV LG +PVEV+P + +L E G +R++ D P VTDNGN+V+D I D + + GVVE+G+F +A VI + G+ Sbjct: 31 STTHYFIEELGRRVREEGL-EVMGVPTSYQSMFLAAESGIKVTSLAEHDV-DVAVDGADEVDPDLNLIKGGGAAHTLEKIVDSSAASFIVIVDESKLVERLG--AFPLPVEVIPAACRPVKLKL----ESMGASVNIRSSEGKDGPVVTDNGNFVLDAAFGV-IDDPGAMESRLNNIPGVVENGIFAGIADMVIAGTSEGL 222 The following BLAST results are available for this feature:
BLAST of DC887593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 459
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887593 ID=DC887593; Name=DC887593; organism=Citrus sinensis; type=EST; length=601bpback to top |