CN184953

Overview
NameCN184953
Unique NameCN184953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.076e-37
Identity = 75/119 (63.03%), Postives = 95/119 (79.83%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G +N+ITITNDKGRLSKEDIERMVQEAEKYKAEDE+ + KV +KN LE+YA++M+ TV+D+K+ GK+   DKQKI    +E + WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.076e-37
Identity = 75/119 (63.03%), Postives = 95/119 (79.83%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G +N+ITITNDKGRLSKEDIERMVQEAEKYKAEDE+ + KV +KN LE+YA++M+ TV+D+K+ GK+   DKQKI    +E + WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.076e-37
Identity = 75/119 (63.03%), Postives = 95/119 (79.83%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G +N+ITITNDKGRLSKEDIERMVQEAEKYKAEDE+ + KV +KN LE+YA++M+ TV+D+K+ GK+   DKQKI    +E + WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 3.076e-37
Identity = 75/119 (63.03%), Postives = 95/119 (79.83%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G +N+ITITNDKGRLSKEDIERMVQEAEKYKAEDE+ + KV +KN LE+YA++M+ TV+D+K+ GK+   DKQKI    +E + WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.017e-37
Identity = 75/119 (63.03%), Postives = 96/119 (80.67%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G +N+ITITNDKGRLSKEDIERMVQEAEKYKAED+  + KV AKN LE+YA++M++TV+D+K+ GK++  DKQKI    +E + WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.169e-36
Identity = 73/119 (61.34%), Postives = 95/119 (79.83%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G +N+ITITNDKGRLSKEDIERMVQEAEKYKAED+  + KV AKN LE+YA++M++TV+D+K+ GK++  DK KI    +E + WLD NQ AE DE+E + K+LE +CNPII K+YQ
Sbjct:  494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQ 612          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HS71B_BOVIN (Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.527e-36
Identity = 72/119 (60.50%), Postives = 95/119 (79.83%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G  N+ITITNDKGRLSKE+IERMVQEAEKYKAEDE  +++V AKN LE+YA++M++ V+D+ + GK++ ADK+K+     E + WLD N LAE DEFE K KELE +CNPII+++YQ
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRLYQ 612          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.527e-36
Identity = 72/119 (60.50%), Postives = 95/119 (79.83%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G  N+ITITNDKGRLSKE+IERMVQEAEKYKAEDE  +++V AKN LE+YA++M++ V+D+ + GK++ ADK+K+     E + WLD N LAE DEFE K KELE +CNPII+++YQ
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRLYQ 612          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 1.527e-36
Identity = 72/119 (60.50%), Postives = 95/119 (79.83%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G  N+ITITNDKGRLSKE+IERMVQEAEKYKAEDE  +++V AKN LE+YA++M++ V+D+ + GK++ ADK+K+     E + WLD N LAE DEFE K KELE +CNPII+++YQ
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRLYQ 612          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 1.994e-36
Identity = 73/117 (62.39%), Postives = 93/117 (79.49%), Query Frame = -1
Query:  250 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 600
            G   +ITITNDKGRLSKE+I+RMV EAEKYKAEDE    +++AKN LE+YAYS+RN++ D  +  K+ A+DK+ I+KAV ET+EWLD N  A  DE+EDK KELEG+ NPI+AK+YQ
Sbjct:  494 GKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610          
The following BLAST results are available for this feature:
BLAST of CN184953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
HSP7C_HUMAN3.076e-3763.03Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE3.076e-3763.03Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_CRIGR3.076e-3763.03Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP7C_BOVIN3.076e-3763.03Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP7C_DANRE4.017e-3763.03Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HSP7C_ICTPU1.169e-3661.34Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HS71B_BOVIN1.527e-3660.50Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA... [more]
HS71B_BOSMU1.527e-3660.50Heat shock 70 kDa protein 1B OS=Bos mutus grunnien... [more]
HS71A_BOVIN1.527e-3660.50Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA... [more]
HSP71_SCHPO1.994e-3662.39Probable heat shock protein ssa1 OS=Schizosaccharo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006G23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184953 ID=CN184953; Name=CN184953; organism=Citrus sinensis; type=EST; length=606bp
AAAATTACATCCGTAACATTATTTATATTTATCTCTCAAACGATTCCTAA
ACCTTTGCATCATTTGACAACACACACCATCATAAGAAAAAACAGAGCAG
AAGGAACGGAACATAGCAGGAAGGACTTCCCTAGCGACAACGTTTTAACT
TCAATCAACTTCCTCAATCTTAGGCCCAGCACCGGCACCAGAACCACCAG
ACCCGGAGGAGCCATAGCCGCCACCCATTGGAACATCCCCACCGTCACCT
TGATACATCTTTGCTATTATGGGATTGCACAAGCCCTCCAACTCCTTCAA
CTTGTCCTCGAACTCATCAACTTCAGCCAGTTGATTCCCGTCAAGCCACT
CGACAGTCTCATCAACTGCCTTCTCAATCTTTTGCTTGTCTGCTGCGGCC
AATTTTCCTGCAACCTTGTCATCCTTCACTGTATTCCTCATACTGTACGC
GTAATTCTCTAACTTGTTCTTCGCCTCCACCTTCTTCTTCACTTGTTCAT
CTTCAGCCTTGTACTTCTCTGCCTCTTGCACCATCCTCTCGATATCTTCC
TTGCTCAATCTTCCCTTATCATTGGTGATTGTAATCTGGTTCTTCACTCC
AGCAGT
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