CN184953

Overview
NameCN184953
Unique NameCN184953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.994e-36
Identity = 72/118 (61.02%), Postives = 94/118 (79.66%), Query Frame = -1
Query:  253 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 606
            + G +N+ITITNDKGRL+K+DIERMVQEAEKYK+EDE    ++EAKN LENYAY++RNT+ D+K+ GK+  +DK+ I+  V + + WLD NQ AE +EFE K KELEG+ NPI+ KMY
Sbjct:  497 STGKENKITITNDKGRLTKDDIERMVQEAEKYKSEDEANNVRIEAKNGLENYAYNLRNTLNDEKLQGKIDESDKKVIDDKVTDIINWLDHNQSAEKEEFEAKQKELEGIANPIMQKMY 614          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP71_ORYLA (Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.604e-36
Identity = 69/119 (57.98%), Postives = 97/119 (81.51%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G +N+ITITNDKGRLSKEDIERMVQEAEKYKAEDEQ + K+ AKN LE+ A++++++ +DD +  K++  D++++ +  DET+ WL+ NQLA+ DEF+ K KELE +CNPII+K+YQ
Sbjct:  496 STGNENKITITNDKGRLSKEDIERMVQEAEKYKAEDEQQRDKIAAKNSLESLAFNLKSSAQDDSLKDKISQEDRKRVVEKCDETIAWLENNQLADKDEFQHKQKELEKVCNPIISKLYQ 614          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.604e-36
Identity = 71/119 (59.66%), Postives = 98/119 (82.35%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G +N+ITIT DKGRLSKE+IERMV +AEK+K EDE+ + +V AKN LE+YA+SM++TV+D+KV  K+  +D+++I +  +ETV+WLDGNQ AE +E+E + KELE +CNPIIAKMYQ
Sbjct:  496 STGKQNKITITRDKGRLSKEEIERMVNDAEKFKQEDEKQRDRVAAKNGLESYAFSMKSTVEDEKVKEKIGESDRRRIMEKCEETVKWLDGNQQAEKEEYEHRQKELESVCNPIIAKMYQ 614          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.401e-36
Identity = 67/119 (56.30%), Postives = 97/119 (81.51%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G +N+ITITNDKGRLSKEDIERMVQ+A+KYKAED+  ++K+ AKN LE+YA++M+++V+DD + GK++  DK+K+    D+T+ WL+ NQL + +E+E +LKELE +C PII K+YQ
Sbjct:  496 STGKENKITITNDKGRLSKEDIERMVQDADKYKAEDDAQREKIAAKNSLESYAFNMKSSVEDDNMKGKISQEDKKKVVDRCDQTISWLENNQLGDKEEYEHQLKELEKVCQPIITKLYQ 614          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 3.401e-36
Identity = 68/119 (57.14%), Postives = 97/119 (81.51%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G K +ITITNDKGRLSKE+IE+MV +AEK+K +DEQ K +VE+KNKLENYA++++N++KD+KVA K++ +DK  IE   +  ++WL+ NQ AE DE+EDK+K LE + NPI++K+YQ
Sbjct:  492 STGNKQKITITNDKGRLSKEEIEKMVADAEKFKQQDEQQKDRVESKNKLENYAFTVKNSIKDEKVAAKISDSDKSTIESETESVLKWLESNQTAEKDEYEDKMKALEAVVNPIMSKLYQ 610          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 4.442e-36
Identity = 70/119 (58.82%), Postives = 96/119 (80.67%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G +N+ITITNDKGRLSK+DIERMV EAEKYKA+DE  K ++ AKN LE+YA++++ T++D+K+  K++  DK+KIE   DE ++WLD NQ AE +EFE + K+LEGL NPII+K+YQ
Sbjct:  495 STGKQNKITITNDKGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQ 613          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.442e-36
Identity = 72/119 (60.50%), Postives = 94/119 (78.99%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G  N+ITITNDKGRLSKE+IERMVQEAEKYKAEDE  +++V AKN LE+YA++M++ V+D+ + GK++ ADK+K+     E + WLD N LAE DEFE K KELE +CNPII+ +YQ
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 612          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 150.984 bits (380), Expect = 4.442e-36
Identity = 72/119 (60.50%), Postives = 94/119 (78.99%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G  N+ITITNDKGRLSKE+IERMVQEAEKYKAEDE  +++V AKN LE+YA++M++ V+D+ + GK++ ADK+K+     E + WLD N LAE DEFE K KELE +CNPII+ +YQ
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 612          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.801e-36
Identity = 70/119 (58.82%), Postives = 94/119 (78.99%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G +N+ITITNDKGRLSK+DI+RMVQEAE+YK+EDE  + +V AKN LE+Y Y+++ TV+D+K+ GK++  DK KI     E + WLD NQ+AE DE+E K KELE +CNPII+K+YQ
Sbjct:  497 STGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNALESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ 615          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.801e-36
Identity = 72/119 (60.50%), Postives = 94/119 (78.99%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G  N+ITITNDKGRLSKE+IERMVQEAEKYKAEDE  +++V AKN LE+YA++M++ V+D+ + GK++ ADK+K+     E + WLD N LAE DEFE K KELE +CNPII+ +YQ
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEIQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 612          
The following BLAST results are available for this feature:
BLAST of CN184953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
HSP70_ACHKL1.994e-3661.02Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
HSP71_ORYLA2.604e-3657.98Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=... [more]
HSP70_ECHGR2.604e-3659.66Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]
HSP70_ONCTS3.401e-3656.30Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HS7C1_DICDI3.401e-3657.14Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HSP7A_CAEEL4.442e-3658.82Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP71_PONAB4.442e-3660.50Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]
HSP71_HUMAN4.442e-3660.50Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]
HSP72_HUMAN5.801e-3658.82Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HS71B_PIG5.801e-3660.50Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006G23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184953 ID=CN184953; Name=CN184953; organism=Citrus sinensis; type=EST; length=606bp
AAAATTACATCCGTAACATTATTTATATTTATCTCTCAAACGATTCCTAA
ACCTTTGCATCATTTGACAACACACACCATCATAAGAAAAAACAGAGCAG
AAGGAACGGAACATAGCAGGAAGGACTTCCCTAGCGACAACGTTTTAACT
TCAATCAACTTCCTCAATCTTAGGCCCAGCACCGGCACCAGAACCACCAG
ACCCGGAGGAGCCATAGCCGCCACCCATTGGAACATCCCCACCGTCACCT
TGATACATCTTTGCTATTATGGGATTGCACAAGCCCTCCAACTCCTTCAA
CTTGTCCTCGAACTCATCAACTTCAGCCAGTTGATTCCCGTCAAGCCACT
CGACAGTCTCATCAACTGCCTTCTCAATCTTTTGCTTGTCTGCTGCGGCC
AATTTTCCTGCAACCTTGTCATCCTTCACTGTATTCCTCATACTGTACGC
GTAATTCTCTAACTTGTTCTTCGCCTCCACCTTCTTCTTCACTTGTTCAT
CTTCAGCCTTGTACTTCTCTGCCTCTTGCACCATCCTCTCGATATCTTCC
TTGCTCAATCTTCCCTTATCATTGGTGATTGTAATCTGGTTCTTCACTCC
AGCAGT
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