CN184953

Overview
NameCN184953
Unique NameCN184953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.688e-35
Identity = 71/119 (59.66%), Postives = 93/119 (78.15%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G +N+ITITNDKGRLSK+DI+RMVQEAEKYKAEDE  + +V AKN LE+Y Y+M+ TV+D+K+ GK++  DKQK+     E +  LD NQ+AE +E+E K KELE LCNPI+ K+YQ
Sbjct:  497 STGKENKITITNDKGRLSKDDIDRMVQEAEKYKAEDEANRDRVGAKNSLESYTYNMKQTVEDEKLKGKISDQDKQKVLDKCQEVISSLDRNQMAEKEEYEHKQKELEKLCNPIVTKLYQ 615          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.204e-35
Identity = 71/117 (60.68%), Postives = 90/117 (76.92%), Query Frame = -1
Query:  250 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 600
            G +NQITITNDKGRLSK++IERMV +A KY+A+D   + +VEAKN LENYAYSM+NT+ D  V+GKL  +DK  + K +D T+EWL  NQ A  +E+E K KELE +CNPI+ KMYQ
Sbjct:  498 GKRNQITITNDKGRLSKDEIERMVNDAMKYEADDRAQRDRVEAKNGLENYAYSMKNTLGDSNVSGKLDDSDKATLNKEIDVTLEWLSSNQEATKEEYEHKQKELESVCNPIMTKMYQ 614          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.879e-35
Identity = 70/119 (58.82%), Postives = 96/119 (80.67%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G  N+ITITNDKGRLSKE+IERMV+EAEKYK EDE++ KK+EAKN LENYAY++RNTV+D+K+  K+   DK+ IE+ V E +E+++ N+  E +E+E+K KEL+   NPII+K+YQ
Sbjct:  500 STGKSNKITITNDKGRLSKEEIERMVEEAEKYKTEDEKLDKKLEAKNSLENYAYNIRNTVRDEKLKEKIQEEDKKSIEEKVKEVLEFIETNEDLEKEEYEEKEKELKNFANPIISKLYQ 618          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4)

HSP 1 Score: 148.288 bits (373), Expect = 2.879e-35
Identity = 70/119 (58.82%), Postives = 94/119 (78.99%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G  N+ITITNDKGRLSKE+IERMVQEAE+YKAEDE  ++K+ AKN LE+YA++M++ V D+ +  K++ +DK+KI    +E + WL+ NQLAE DEF+ K KELE +CNPII K+YQ
Sbjct:  496 STGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEGQREKIAAKNALESYAFNMKSAVGDEGLKDKISESDKKKILDKCNEVLSWLEANQLAEKDEFDHKRKELENMCNPIITKLYQ 614          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.760e-35
Identity = 70/119 (58.82%), Postives = 94/119 (78.99%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G  N+ITITNDKGRLSKE+IERMV +AEKYKAEDE  ++K+ AKN LE+YA++M++ V D+ + GK++ ADK+KI    +E + WL+ NQLAE DEF+ K +ELE +CNPII K+YQ
Sbjct:  496 STGKANKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSAVSDEGLKGKISDADKKKILNKCNEALSWLEANQLAEKDEFDHKRRELEQVCNPIITKLYQ 614          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.760e-35
Identity = 70/119 (58.82%), Postives = 94/119 (78.99%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G  N+ITITNDKGRLSKE+IERMV +AEKYKAEDE  ++K+ AKN LE+YA++M++ V D+ + GK++ +DK+KI    +E + WL+ NQLAE DEF+ K KELE +CNPII K+YQ
Sbjct:  496 STGKANKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSVVSDEGLKGKISESDKKKILDKCNELLSWLEANQLAEKDEFDHKRKELEQMCNPIITKLYQ 614          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 4.911e-35
Identity = 71/117 (60.68%), Postives = 91/117 (77.78%), Query Frame = -1
Query:  250 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 600
            G   +ITITNDKGRLSKE+I+RMV EAEKYKAEDE    +++AKN LE+YAYS+RN++ D  +  K+ A+DK+ ++KAV ET+EWLD N  A  DEFE K KELE + NPI+AK+YQ
Sbjct:  494 GKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.414e-35
Identity = 68/118 (57.63%), Postives = 93/118 (78.81%), Query Frame = -1
Query:  253 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 606
            T G  N+ITITNDKGRLSKE+IERMV EAEKYKAEDE+   ++ ++N LE+YAY++RN++ D+K+A K  AADK+K+E AV+ T+ WLD +Q A  +E+E+  KELE + NPI+ K+Y
Sbjct:  492 TTGKSNRITITNDKGRLSKEEIERMVNEAEKYKAEDEEATARITSRNALESYAYNLRNSLTDEKLADKFDAADKKKLEDAVNSTISWLDNSQEASKEEYEEHQKELEAVANPIMQKLY 609          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_ALTAL (Heat shock 70 kDa protein (Fragment) OS=Alternaria alternata GN=HSP70 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 6.414e-35
Identity = 71/113 (62.83%), Postives = 87/113 (76.99%), Query Frame = -1
Query:  253 NQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 591
            N+I ITNDKGRLSKE+IERM+ EAEKYKAEDE    ++ AKN LE+YAYS+RNT+ D KV  KL A DKQK+   +D+TV+WLD NQ A  DE+E + KELEG+ NPI+ K Y
Sbjct:    3 NKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEAARISAKNALESYAYSLRNTLSDSKVDEKLDAGDKQKLTAEIDKTVQWLDDNQTATKDEYESQQKELEGVANPIMMKFY 115          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.414e-35
Identity = 70/119 (58.82%), Postives = 94/119 (78.99%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G  N+ITITNDKGRLSKE+IERMV +AEKYKAEDE  ++K+ AKN LE+YA++M++ V D+ + GK++ +DK+KI    +E + WL+ NQLAE DEF+ K KELE +CNPII K+YQ
Sbjct:  496 STGKANKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSAVSDEGLQGKISESDKKKILSKCNEVLLWLEANQLAEKDEFDHKRKELEQVCNPIITKLYQ 614          
The following BLAST results are available for this feature:
BLAST of CN184953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
HSP70_CHICK1.688e-3559.66Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HSP70_LEIDO2.204e-3560.68Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP70_PYRSA2.879e-3558.82Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HS71L_MOUSE2.879e-3558.82Heat shock 70 kDa protein 1-like OS=Mus musculus G... [more]
HS71L_PIG3.760e-3558.82Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HS71L_MACFA3.760e-3558.82Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
HSP72_SCHPO4.911e-3560.68Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP71_PUCGR6.414e-3557.63Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HSP70_ALTAL6.414e-3562.83Heat shock 70 kDa protein (Fragment) OS=Alternaria... [more]
HS71L_BOVIN6.414e-3558.82Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006G23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184953 ID=CN184953; Name=CN184953; organism=Citrus sinensis; type=EST; length=606bp
AAAATTACATCCGTAACATTATTTATATTTATCTCTCAAACGATTCCTAA
ACCTTTGCATCATTTGACAACACACACCATCATAAGAAAAAACAGAGCAG
AAGGAACGGAACATAGCAGGAAGGACTTCCCTAGCGACAACGTTTTAACT
TCAATCAACTTCCTCAATCTTAGGCCCAGCACCGGCACCAGAACCACCAG
ACCCGGAGGAGCCATAGCCGCCACCCATTGGAACATCCCCACCGTCACCT
TGATACATCTTTGCTATTATGGGATTGCACAAGCCCTCCAACTCCTTCAA
CTTGTCCTCGAACTCATCAACTTCAGCCAGTTGATTCCCGTCAAGCCACT
CGACAGTCTCATCAACTGCCTTCTCAATCTTTTGCTTGTCTGCTGCGGCC
AATTTTCCTGCAACCTTGTCATCCTTCACTGTATTCCTCATACTGTACGC
GTAATTCTCTAACTTGTTCTTCGCCTCCACCTTCTTCTTCACTTGTTCAT
CTTCAGCCTTGTACTTCTCTGCCTCTTGCACCATCCTCTCGATATCTTCC
TTGCTCAATCTTCCCTTATCATTGGTGATTGTAATCTGGTTCTTCACTCC
AGCAGT
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