CN184953

Overview
NameCN184953
Unique NameCN184953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 8.377e-35
Identity = 67/119 (56.30%), Postives = 92/119 (77.31%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G    +TITNDKGRLS+E+I+RMV+EAEKYK EDE+ +K VE+K+KLENY YSM+NT+ +D+V  KL A +       + E ++W++ NQLAE DEFEDKLK +EG+CNP++ K+YQ
Sbjct:  495 STGKSEHVTITNDKGRLSQEEIDRMVEEAEKYKEEDEKRRKCVESKHKLENYCYSMKNTLSEDQVKQKLGADEVDNALNTITEALKWVETNQLAEHDEFEDKLKHVEGVCNPLVTKLYQ 613          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.094e-34
Identity = 69/119 (57.98%), Postives = 93/119 (78.15%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G  N+ITITNDKGRLSKE+IERMVQEAE+YKAEDE  ++K+ AKN LE+YA++M++ V D+ +  K++ +DK+KI     E + WL+ NQLAE +EF+ K KELE +CNPII K+YQ
Sbjct:  496 STGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEGQREKIAAKNALESYAFNMKSAVGDEGLKDKISESDKKKILDKCSEVLSWLEANQLAEKEEFDHKRKELENMCNPIITKLYQ 614          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.429e-34
Identity = 70/119 (58.82%), Postives = 93/119 (78.15%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G  N+ITITNDKGRLSKE+IERMV +AEKYKAEDE  ++K+ AKN LE+YA++M++ V D+ + GK++ +DK KI    +E + WL+ NQLAE DEF+ K KELE +CNPII K+YQ
Sbjct:  496 STGKVNKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSVVSDEGLKGKISESDKNKILDKCNELLSWLEVNQLAEKDEFDHKRKELEQMCNPIITKLYQ 614          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 3.183e-34
Identity = 66/116 (56.90%), Postives = 91/116 (78.45%), Query Frame = -1
Query:  253 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 600
            G   +ITITNDKGRLSKE+I++MV EAEK+K EDE+   +V+AKN+LE+YAYS++NT+ D ++  K+ A DK+K+ KA+DET+ WLD +Q A  +E+EDK KELE + NPII+  Y
Sbjct:  495 GKTQKITITNDKGRLSKEEIDKMVSEAEKFKEEDEKEAARVQAKNQLESYAYSLKNTINDGEMKDKIGADDKEKLTKAIDETISWLDASQAASTEEYEDKRKELESVANPIISGAY 610          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 3.183e-34
Identity = 71/116 (61.21%), Postives = 89/116 (76.72%), Query Frame = -1
Query:  253 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 600
            G  NQITITNDKGRLSKE+IERM+ EAEK+K EDE   K+V AKN LE+YAYS+RNT+ D KV  KL AADK+K++  +D+ V WLD NQ A  +E+E++ KELE + NPI+ K Y
Sbjct:  495 GKTNQITITNDKGRLSKEEIERMLAEAEKFKEEDEAEAKRVAAKNGLESYAYSLRNTLSDSKVDEKLDAADKEKLKSEIDKIVAWLDENQQATREEYEERQKELEAIANPIMMKFY 610          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.183e-34
Identity = 69/117 (58.97%), Postives = 88/117 (75.21%), Query Frame = -1
Query:  250 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 600
            G +NQITITNDKGRLSK++IERMV +A KY+A+D+    +VEAKN LENYAYSM+NT+ D  V+GKL   DK  + K ++  +EWL  NQ A  +E+E K KELE +CNPI+ KMYQ
Sbjct:  499 GKRNQITITNDKGRLSKDEIERMVNDAMKYEADDKAQADRVEAKNGLENYAYSMKNTLGDSNVSGKLDDTDKSTLNKEIEAALEWLSSNQEATKEEYEHKQKELENVCNPIMTKMYQ 615          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 4.157e-34
Identity = 70/116 (60.34%), Postives = 88/116 (75.86%), Query Frame = -1
Query:  253 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 600
            G  N+I ITNDKGRLSKE+IERM+ EAEKYKAEDE    ++ AKN LE+YAYS+RNT+ D KV  KL A+DK+K++  +D+TV WLD NQ A  +EFE + KELE + NPI+ K Y
Sbjct:  495 GKTNKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRISAKNGLESYAYSLRNTISDSKVDEKLDASDKEKLKTEIDKTVSWLDENQTATKEEFEAQQKELESVANPIMMKFY 610          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.157e-34
Identity = 70/116 (60.34%), Postives = 88/116 (75.86%), Query Frame = -1
Query:  253 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 600
            G  N+I ITNDKGRLSKE+IERM+ EAEKYKAEDE    ++ AKN LE+YAYS+RNT+ D KV  KL A+DK+K++  +D+TV WLD NQ A  +EFE + KELE + NPI+ K Y
Sbjct:  493 GKTNKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRISAKNGLESYAYSLRNTISDSKVDEKLDASDKEKLKTEIDKTVSWLDENQTATKEEFEAQQKELESVANPIMMKFY 608          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: BIP3_MAIZE (Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.157e-34
Identity = 65/118 (55.08%), Postives = 99/118 (83.90%), Query Frame = -1
Query:  250 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 600
            G   +ITITN+KGRLS+E+I+RMV+EAE++  ED++VK++++A+N+LE Y Y+M+NTV D DK+A KL A +K+K+E+A+ E +EWLD NQ AE +++E+KLKE+E +CNPI++ +YQ
Sbjct:  525 GKSEKITITNEKGRLSQEEIDRMVREAEEFAEEDKKVKERIDARNQLETYVYNMKNTVGDKDKLADKLEAEEKEKVEEALKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIVSAVYQ 642          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: BIP2_MAIZE (Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=1 SV=3)

HSP 1 Score: 144.436 bits (363), Expect = 4.157e-34
Identity = 65/118 (55.08%), Postives = 99/118 (83.90%), Query Frame = -1
Query:  250 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 600
            G   +ITITN+KGRLS+E+I+RMV+EAE++  ED++VK++++A+N+LE Y Y+M+NTV D DK+A KL A +K+K+E+A+ E +EWLD NQ AE +++E+KLKE+E +CNPI++ +YQ
Sbjct:  525 GKSEKITITNEKGRLSQEEIDRMVREAEEFAEEDKKVKERIDARNQLETYVYNMKNTVGDKDKLADKLEAEEKEKVEEALKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIVSAVYQ 642          
The following BLAST results are available for this feature:
BLAST of CN184953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
HSP70_THEPA8.377e-3556.30Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HS71L_RAT1.094e-3457.98Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]
HS71L_HUMAN1.429e-3458.82Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]
HSP71_CANAL3.183e-3456.90Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]
HSP70_NEUCR3.183e-3461.21Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP70_LEIAM3.183e-3458.97Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP72_PARBA4.157e-3460.34Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP71_PARBA4.157e-3460.34Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]
BIP3_MAIZE4.157e-3455.08Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=... [more]
BIP2_MAIZE4.157e-3455.08Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006G23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184953 ID=CN184953; Name=CN184953; organism=Citrus sinensis; type=EST; length=606bp
AAAATTACATCCGTAACATTATTTATATTTATCTCTCAAACGATTCCTAA
ACCTTTGCATCATTTGACAACACACACCATCATAAGAAAAAACAGAGCAG
AAGGAACGGAACATAGCAGGAAGGACTTCCCTAGCGACAACGTTTTAACT
TCAATCAACTTCCTCAATCTTAGGCCCAGCACCGGCACCAGAACCACCAG
ACCCGGAGGAGCCATAGCCGCCACCCATTGGAACATCCCCACCGTCACCT
TGATACATCTTTGCTATTATGGGATTGCACAAGCCCTCCAACTCCTTCAA
CTTGTCCTCGAACTCATCAACTTCAGCCAGTTGATTCCCGTCAAGCCACT
CGACAGTCTCATCAACTGCCTTCTCAATCTTTTGCTTGTCTGCTGCGGCC
AATTTTCCTGCAACCTTGTCATCCTTCACTGTATTCCTCATACTGTACGC
GTAATTCTCTAACTTGTTCTTCGCCTCCACCTTCTTCTTCACTTGTTCAT
CTTCAGCCTTGTACTTCTCTGCCTCTTGCACCATCCTCTCGATATCTTCC
TTGCTCAATCTTCCCTTATCATTGGTGATTGTAATCTGGTTCTTCACTCC
AGCAGT
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