CN184953

Overview
NameCN184953
Unique NameCN184953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 1.580e-33
Identity = 68/117 (58.12%), Postives = 88/117 (75.21%), Query Frame = -1
Query:  250 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 600
            G +NQI ITNDKGRLSK DIERMV +A KY+AED+     ++AKN LENYA+SM+NT+ D  VAGKL  ADK  +  AV+E + WL+ NQ A ++E+  + KELEG+C PI++KMYQ
Sbjct:  499 GKRNQIVITNDKGRLSKADIERMVSDAAKYEAEDKAHVXXIDAKNGLENYAFSMKNTINDPNVAGKLDDADKNAVTTAVEEALRWLNDNQEASLEEYNHRQKELEGVCAPILSKMYQ 615          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: BIP2_TOBAC (Luminal-binding protein 2 (Fragment) OS=Nicotiana tabacum GN=BIP2 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.580e-33
Identity = 66/118 (55.93%), Postives = 94/118 (79.66%), Query Frame = -1
Query:  250 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 600
            G   +ITITNDKGRLS+E+IERMV+EAE++  ED++VK++++A+N LE Y Y+M+N + D DK+A KL + +K+KIE A  E +EWLD NQ AE +++E+KLKE+E +CNPII  +YQ
Sbjct:  152 GKSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 269          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: BIP_SOLLC (Luminal-binding protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.695e-33
Identity = 66/118 (55.93%), Postives = 94/118 (79.66%), Query Frame = -1
Query:  250 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 600
            G   +ITITNDKGRLS+E+IERMV+EAE++  ED++VK+K++A+N LE Y Y+M+N + D DK+A KL + +K+KIE A  E +EWLD NQ AE +++++KLKE+E +CNPII  +YQ
Sbjct:  528 GKAEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKEKIDARNALETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQ 645          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 4.597e-33
Identity = 65/115 (56.52%), Postives = 91/115 (79.13%), Query Frame = -1
Query:  250 KNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 594
            +N+ITITNDKGRLSKEDIERMV EAEKY+ EDE+ K+ + AKN LE+Y ++M+ T+ +D +  K++ +D+  I    +ET++WLD NQLA+ +E+E + KELEG+CNPII K+YQ
Sbjct:  498 ENKITITNDKGRLSKEDIERMVNEAEKYRNEDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSDRTTILDKCNETIKWLDANQLADKEEYEHRQKELEGVCNPIITKLYQ 612          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_LEIBR (Heat shock 70 kDa protein (Fragment) OS=Leishmania braziliensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.597e-33
Identity = 66/117 (56.41%), Postives = 86/117 (73.50%), Query Frame = -1
Query:  250 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 600
            G +N ITITNDKGRLSK++IERMV +A KY+  D+  +  +EAKN LENYAYSM+NTV D  V+GKL  +D+  +  A+D  +EWL+ NQ A  +E+E + KELE  CNPI+ KMYQ
Sbjct:   73 GKRNHITITNDKGRLSKDEIERMVNDASKYEQADKMQRDALEAKNGLENYAYSMKNTVSDTNVSGKLEESDRSALNLAIDTALEWLNSNQEASKEEYEHRQKELESTCNPIMTKMYQ 189          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HS71B_MOUSE (Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hspa1b PE=1 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 6.003e-33
Identity = 67/119 (56.30%), Postives = 92/119 (77.31%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G  N+ITITNDKGRLSKE+IERMVQEAE+YKAEDE  + +V AKN LE+YA++M++ V+D+ + GKL+ ADK+K+     E + WLD N LA+ +EF  K +ELE +C+PII+ +YQ
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDEGLKGKLSEADKKKVLDKCQEVISWLDSNTLADKEEFVHKREELERVCSPIISGLYQ 612          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HS71A_MOUSE (Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hspa1a PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 6.003e-33
Identity = 67/119 (56.30%), Postives = 92/119 (77.31%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G  N+ITITNDKGRLSKE+IERMVQEAE+YKAEDE  + +V AKN LE+YA++M++ V+D+ + GKL+ ADK+K+     E + WLD N LA+ +EF  K +ELE +C+PII+ +YQ
Sbjct:  494 STGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDEGLKGKLSEADKKKVLDKCQEVISWLDSNTLADKEEFVHKREELERVCSPIISGLYQ 612          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.841e-33
Identity = 63/119 (52.94%), Postives = 95/119 (79.83%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            ++G +N+ITITNDKGRLSKEDIE+MVQEAEKYKA+D+  +++V+AKN LE+YA+++++ V+D+ V GK++  DK+ I +   + + WL+ NQLAE +E+  + K+LE +C PII K+YQ
Sbjct:  495 SSGKQNKITITNDKGRLSKEDIEKMVQEAEKYKADDDAQRERVDAKNALESYAFNLKSMVEDENVKGKISDEDKRTISEKCTQVISWLENNQLAEKEEYAFQQKDLEKVCQPIITKLYQ 613          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.024e-32
Identity = 64/119 (53.78%), Postives = 95/119 (79.83%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            ++G +N+ITITNDKGRLSKE+IERMVQEAE+YKA+DE  ++KV AKN LE+ A++M++TV+ D +  K++  D++KI    ++T+ W++ NQ+AE +E+E + KELE +CN II K+YQ
Sbjct:  496 SSGKQNKITITNDKGRLSKEEIERMVQEAERYKADDEAQREKVSAKNTLESIAFNMKSTVEGDNLKDKISEDDRKKIVDKCNQTISWMENNQMAEKEEYEHQQKELEKVCNSIITKLYQ 614          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.337e-32
Identity = 62/118 (52.54%), Postives = 93/118 (78.81%), Query Frame = -1
Query:  253 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 606
            + G K++ITITNDKGRL+ E IE+MV++AE +KA+DE  ++ VE+KNKLENYAY++R+T+KDDK+A KL+  D++ +E+  DE + WL  N  A  +E+E  +K+LE +C+PII+K+Y
Sbjct:  493 STGNKHKITITNDKGRLTAEQIEKMVKDAEMFKAQDEAQREVVESKNKLENYAYTVRSTIKDDKIAAKLSKEDRKTVEEKSDEAINWLHANDSATKEEYEKAMKDLEAVCSPIISKVY 610          
The following BLAST results are available for this feature:
BLAST of CN184953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
HSP74_TRYBB1.580e-3358.12Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
BIP2_TOBAC1.580e-3355.93Luminal-binding protein 2 (Fragment) OS=Nicotiana ... [more]
BIP_SOLLC2.695e-3355.93Luminal-binding protein OS=Solanum lycopersicum PE... [more]
HSP7D_DROME4.597e-3356.52Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP70_LEIBR4.597e-3356.41Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HS71B_MOUSE6.003e-3356.30Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hs... [more]
HS71A_MOUSE6.003e-3356.30Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hs... [more]
HSP70_XENLA7.841e-3352.94Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HSP70_PLEWA1.024e-3253.78Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HS7C2_DICDI1.337e-3252.54Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006G23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184953 ID=CN184953; Name=CN184953; organism=Citrus sinensis; type=EST; length=606bp
AAAATTACATCCGTAACATTATTTATATTTATCTCTCAAACGATTCCTAA
ACCTTTGCATCATTTGACAACACACACCATCATAAGAAAAAACAGAGCAG
AAGGAACGGAACATAGCAGGAAGGACTTCCCTAGCGACAACGTTTTAACT
TCAATCAACTTCCTCAATCTTAGGCCCAGCACCGGCACCAGAACCACCAG
ACCCGGAGGAGCCATAGCCGCCACCCATTGGAACATCCCCACCGTCACCT
TGATACATCTTTGCTATTATGGGATTGCACAAGCCCTCCAACTCCTTCAA
CTTGTCCTCGAACTCATCAACTTCAGCCAGTTGATTCCCGTCAAGCCACT
CGACAGTCTCATCAACTGCCTTCTCAATCTTTTGCTTGTCTGCTGCGGCC
AATTTTCCTGCAACCTTGTCATCCTTCACTGTATTCCTCATACTGTACGC
GTAATTCTCTAACTTGTTCTTCGCCTCCACCTTCTTCTTCACTTGTTCAT
CTTCAGCCTTGTACTTCTCTGCCTCTTGCACCATCCTCTCGATATCTTCC
TTGCTCAATCTTCCCTTATCATTGGTGATTGTAATCTGGTTCTTCACTCC
AGCAGT
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