CN184953

Overview
NameCN184953
Unique NameCN184953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: BIP2_ARATH (Luminal-binding protein 2 OS=Arabidopsis thaliana GN=At5g42020 PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.747e-32
Identity = 65/119 (54.62%), Postives = 94/119 (78.99%), Query Frame = -1
Query:  250 AGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 603
            +G   +ITITN+KGRLS+E+I+RMV+EAE++  ED++VK+K++A+N LE Y Y+M+N V D DK+A KL   +K+KIE A  E +EWLD NQ +E +E+++KLKE+E +CNPII  +YQ
Sbjct:  526 SGKSEKITITNEKGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVSDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQ 644          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: BIP1_ARATH (Luminal-binding protein 1 OS=Arabidopsis thaliana GN=At5g28540 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.747e-32
Identity = 65/119 (54.62%), Postives = 94/119 (78.99%), Query Frame = -1
Query:  250 AGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 603
            +G   +ITITN+KGRLS+E+I+RMV+EAE++  ED++VK+K++A+N LE Y Y+M+N V D DK+A KL   +K+KIE A  E +EWLD NQ +E +E+++KLKE+E +CNPII  +YQ
Sbjct:  526 SGKSEKITITNEKGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVNDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQ 644          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.281e-32
Identity = 62/119 (52.10%), Postives = 91/119 (76.47%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            + G +N+ITITNDKGRLSKEDIERMV +AE Y+  DEQ + ++ AKN+LE+Y + +R+T+ D+ ++ + + AD++ I++   ET+ WLD NQLAE  EFE K +ELE +C+PII ++YQ
Sbjct:  494 STGKENRITITNDKGRLSKEDIERMVNDAEAYRQADEQQRDRINAKNQLESYCFQLRSTLDDEHLSSRFSPADRETIQQRSSETIAWLDANQLAERQEFEHKQQELERICSPIITRLYQ 612          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 2.979e-32
Identity = 61/116 (52.59%), Postives = 90/116 (77.59%), Query Frame = -1
Query:  253 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 600
            G  N+ITITNDKGRLSK+DI+RMV EAEKY+A+DE+  ++V+AKN+LE+YA++++NT+ +     K+   D +++E A  ET++WLD +Q A  DE++D+ KELEG+ NPI+ K Y
Sbjct:  494 GKSNKITITNDKGRLSKDDIDRMVSEAEKYRADDEREAERVQAKNQLESYAFTLKNTINEASFKEKVGEDDAKRLETASQETIDWLDASQAASTDEYKDRQKELEGIANPIMTKFY 609          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.979e-32
Identity = 65/116 (56.03%), Postives = 89/116 (76.72%), Query Frame = -1
Query:  253 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 600
            G  N+ITITNDKGRLSKEDIERM+ +AEKYKAEDE    +++AKN LE+YAYS++NT+ + ++  +++  DK+K+   +DE + WLD NQ AE DE+E + KELEG+ NPII+  Y
Sbjct:  494 GKTNKITITNDKGRLSKEDIERMLADAEKYKAEDEAEAARIQAKNGLESYAYSLKNTISEGQL--QISEDDKKKVSDKIDEVISWLDNNQTAEKDEYESQQKELEGVANPIISAAY 607          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 3.891e-32
Identity = 65/117 (55.56%), Postives = 89/117 (76.07%), Query Frame = -1
Query:  250 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 600
            G   +ITITNDKGRLSKE+IE+MV EAEK+K EDE+   +V+AKN+LE+YAYS++NT+ +++   KL A++ +++ KA DET+ WLD NQ A  +EF D+ KELE   NPI+ K YQ
Sbjct:  494 GKTQKITITNDKGRLSKEEIEKMVSEAEKFKEEDEKEASRVQAKNQLESYAYSLKNTLGEEQFKSKLDASEIEEVTKAADETIAWLDSNQTATQEEFADQQKELESKANPIMTKAYQ 610          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.891e-32
Identity = 65/113 (57.52%), Postives = 86/113 (76.11%), Query Frame = -1
Query:  253 NQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 591
            N+I ITNDKGRLSKE+IERM+ EAEKYKAEDE    ++  KN LE+YAYS+RN+++  KV  KL A DK+K++  +D+TV+WLD NQ A  +E+E + KELE + NPI+ K Y
Sbjct:  498 NKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRIRPKNGLESYAYSLRNSLRHSKVDEKLEAGDKEKLKSEIDKTVQWLDENQTATKEEYESQQKELEAVANPIMMKFY 610          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.082e-32
Identity = 65/118 (55.08%), Postives = 88/118 (74.58%), Query Frame = -1
Query:  253 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 606
            + G +N+ITITND+    + DI+RMV EAEKYK+EDE  K ++EAKN LENY+Y++RNT+ D+K+  ++   DK+ IE  V ET+ WLD NQ AE +E+E K KELEG+ NPI+ KMY
Sbjct:  497 STGKENKITITNDRVVCRRHDIDRMVSEAEKYKSEDEANKIRIEAKNGLENYSYNLRNTLNDEKLKDQIPEDDKKAIEDKVTETINWLDANQSAEKEEYEGKQKELEGIANPILQKMY 614          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 136.732 bits (343), Expect = 8.669e-32
Identity = 64/117 (54.70%), Postives = 88/117 (75.21%), Query Frame = -1
Query:  250 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 600
            G  N+ITITNDKGRLSKEDIE+MV EAEK+K EDE+  +++ +KN+LE+ AYS++NT+ +     KL  ADK  + K  +ET+ WLD N  A  +EF+DKLKEL+ + NPI++K+YQ
Sbjct:  493 GKSNKITITNDKGRLSKEDIEKMVAEAEKFKEEDEKESQRIASKNQLESIAYSLKNTISE--AGDKLEQADKDTVTKKAEETISWLDSNTTASKEEFDDKLKELQDIANPIMSKLYQ 607          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.479e-31
Identity = 64/116 (55.17%), Postives = 88/116 (75.86%), Query Frame = -1
Query:  253 GVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 600
            G  N+I ITNDKGRLSKE+IERM+ +AEKYK EDE    +++AKN LE+YAYS++NTV D KV  KL+A DK+ +  A+D+TV W+D NQ A  +E+E + K+LE + NP++ K+Y
Sbjct:  495 GKTNKIVITNDKGRLSKEEIERMLADAEKYKEEDEAEAGRIQAKNGLESYAYSLKNTVSDPKVEEKLSAEDKETLTGAIDKTVAWIDENQTATKEEYEAEQKQLESVANPVMMKIY 610          
The following BLAST results are available for this feature:
BLAST of CN184953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
BIP2_ARATH1.747e-3254.62Luminal-binding protein 2 OS=Arabidopsis thaliana ... [more]
BIP1_ARATH1.747e-3254.62Luminal-binding protein 1 OS=Arabidopsis thaliana ... [more]
HSP7A_DROME2.281e-3252.10Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]
HSP73_YEAST2.979e-3252.59Heat shock protein SSA3 OS=Saccharomyces cerevisia... [more]
HSP70_EMENI2.979e-3256.03Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP72_CANAL3.891e-3255.56Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP70_AJECA3.891e-3257.52Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP70_BRELC5.082e-3255.08Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP71_YEAST8.669e-3254.70Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP70_CLAHE1.479e-3155.17Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006G23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184953 ID=CN184953; Name=CN184953; organism=Citrus sinensis; type=EST; length=606bp
AAAATTACATCCGTAACATTATTTATATTTATCTCTCAAACGATTCCTAA
ACCTTTGCATCATTTGACAACACACACCATCATAAGAAAAAACAGAGCAG
AAGGAACGGAACATAGCAGGAAGGACTTCCCTAGCGACAACGTTTTAACT
TCAATCAACTTCCTCAATCTTAGGCCCAGCACCGGCACCAGAACCACCAG
ACCCGGAGGAGCCATAGCCGCCACCCATTGGAACATCCCCACCGTCACCT
TGATACATCTTTGCTATTATGGGATTGCACAAGCCCTCCAACTCCTTCAA
CTTGTCCTCGAACTCATCAACTTCAGCCAGTTGATTCCCGTCAAGCCACT
CGACAGTCTCATCAACTGCCTTCTCAATCTTTTGCTTGTCTGCTGCGGCC
AATTTTCCTGCAACCTTGTCATCCTTCACTGTATTCCTCATACTGTACGC
GTAATTCTCTAACTTGTTCTTCGCCTCCACCTTCTTCTTCACTTGTTCAT
CTTCAGCCTTGTACTTCTCTGCCTCTTGCACCATCCTCTCGATATCTTCC
TTGCTCAATCTTCCCTTATCATTGGTGATTGTAATCTGGTTCTTCACTCC
AGCAGT
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