CN184952
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184952 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.133e-37 Identity = 72/152 (47.37%), Postives = 97/152 (63.82%), Query Frame = 3 Query: 171 SREMFEDLLPYTNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAHTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLP--GQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPYLLATDPVLSFKSAIWF 620 + MFE +LP N+ CP +GFYTYDA+ A + +PGFG +G++ RKRE+AAFFA T ET+G + WGYC + +++P +SD P YYGRGP+QL WN NY CG LG +LL+ P +ATDPVLSF++A+WF Sbjct: 68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNP-NSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWF 218
BLAST of CN184952 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.679e-36 Identity = 77/161 (47.83%), Postives = 104/161 (64.60%), Query Frame = 3 Query: 147 GGELG--KIISREMFEDLLPYTNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAHTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSD-XXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPYLLATDPVLSFKSAIW 617 GG G +++ + FE +LP+ +DA CPARGFY Y AF+ AA AFP F +G+ RKRE+AAF A T H T+ GG Y+WGYCY ++V A+SD PG+ Y+ RGP+Q+ +N NY GEA+G DLL NP L+ATDP ++FK+A+W Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALW 244
BLAST of CN184952 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.679e-36 Identity = 77/161 (47.83%), Postives = 104/161 (64.60%), Query Frame = 3 Query: 147 GGELG--KIISREMFEDLLPYTNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAHTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSD-XXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPYLLATDPVLSFKSAIW 617 GG G +++ + FE +LP+ +DA CPARGFY Y AF+ AA AFP F +G+ RKRE+AAF A T H T+ GG Y+WGYCY ++V A+SD PG+ Y+ RGP+Q+ +N NY GEA+G DLL NP L+ATDP ++FK+A+W Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALW 244
BLAST of CN184952 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 7.295e-34 Identity = 75/174 (43.10%), Postives = 93/174 (53.45%), Query Frame = 3 Query: 99 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYTNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAHTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPYLLATDPVLSFKSAIWF 620 G G G G G G L II MF+D+L Y ND +CPA GFYTY+AFI AA+ FP FGN+G++ MRKREIAAF T HET G W A G +Y WGYC++ N NY CG+ L + LL P L+ TDP ++FK+A+WF Sbjct: 66 GGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM---------------------------------NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWF 206
BLAST of CN184952 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.780e-31 Identity = 70/155 (45.16%), Postives = 94/155 (60.65%), Query Frame = 3 Query: 156 LGKIISREMFEDLLPYTNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAHTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPYLLATDPVLSFKSAIWF 620 + +IS +FE +L + RGFYTYDAFI AA++FP F +G+ +RKRE+AAF A T HETTGGW AP G Y G ++SD Y+GRGPIQ+++N NY G+A+GVDLL NP L+ +D + FK+A+WF Sbjct: 1 VSSVISSSLFEKMLLH--------RGFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG---------STSD-------------YFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWF 125
BLAST of CN184952 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 1.090e-29 Identity = 64/165 (38.79%), Postives = 97/165 (58.79%), Query Frame = 3 Query: 129 TGHGTDGGELGKIISREMFEDLLPYTNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAHTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYG-RGPIQLTWNCNYLRCGEALGVDLLNNPYLLATDPVLSFKSAIWF 620 +G+ T +++ +F+ + + D CP++GFY+Y +F+ AA++FP FG G+ RKRE+AAF AH T+G +D +AWG C+I + +D G+ Y RGPIQLT N NY G+A+G DL+ NP L+ DP++SFK+A+WF Sbjct: 121 SGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWF 282
BLAST of CN184952 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.613e-27 Identity = 67/178 (37.64%), Postives = 95/178 (53.37%), Query Frame = 3 Query: 96 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYTNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAHTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS---DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPYLLATDPVLSFKSAIWF 620 CG+G G D T+ + I++ E F L+ +D C A+GFYT DAF+ AA +P FG +G+ KREIAAFFAH HET +CYI ++ S D YYGRGP+Q++WN NY G+++G D L +P +A PVL+F++A+W+ Sbjct: 49 CGTGCQAGPCDVP-ATNDVSVASIVTPEFFAALVAQADDG-CAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWY 211
BLAST of CN184952 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.247e-25 Identity = 66/182 (36.26%), Postives = 98/182 (53.85%), Query Frame = 3 Query: 96 CGSGVVCGERDTGHGTD----GGELGKIISREMFEDLLPYTNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAHTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXX--LPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPYLLATDPVLSFKSAIWF 620 CG+G G + GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA FAH HET +CYI +++ AS D PG+ Y+GRGPIQL+WN NY CG++L ++LL P L++++P ++F++ +WF Sbjct: 48 CGTGCRSGPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWF 211
BLAST of CN184952 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.127e-25 Identity = 64/176 (36.36%), Postives = 93/176 (52.84%), Query Frame = 3 Query: 96 CGSGVVCGER-DTGHGTDGGELGKIISREMFEDLLPYTNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAHTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPYLLATDPVLSFKSAIWF 620 CG G G D G + I+++E ++ + A CP + FYT F+EA A+PGFG + RKREIAA+FAH HET +A YC Q P + + +Y+GRGP+QL+WN NY+ G+ L D LN+P ++ DP++SFK+++WF Sbjct: 25 CGPGCQAGPCWDPCEGDGTLTVSDIVTQEFWDGIASQAA-ANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYPCNPNK-----------EYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWF 188
BLAST of CN184952 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.190e-25 Identity = 74/192 (38.54%), Postives = 93/192 (48.44%), Query Frame = 3 Query: 93 NCGSGVVCGERDT-----------GHGTDGGELGKIISREMFEDLLPYTNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAHTGHETTGGWTDAPGGEYAWGYCYIRQ----VSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPYLLATDPVLSFKSAIWF 620 NC SG G T G G G + I+S+ F+ ++ A CP + FYT AF+ A P FGN G+ KREIAAFFAH HETT C+I + V A D G+ YYGRGP+QL+WN NY G+A+G D L NP +ATD SFK+A+WF Sbjct: 55 NCQSGPCEGGTPTTPTTPTTPTTPGTGGGGSSVSDIVSQAFFDGIIGQAA-ASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWF 230 The following BLAST results are available for this feature:
BLAST of CN184952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184952 ID=CN184952; Name=CN184952; organism=Citrus sinensis; type=EST; length=622bpback to top |