DC887588
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: ASK14_ARATH (SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.309e-29 Identity = 70/127 (55.12%), Postives = 82/127 (64.57%), Query Frame = -2 Query: 217 IPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 594 +PL NVTGKIL+ VVEYCKKHV ++ K+WD +F+K DQ T+F L+LAANYLNIKGLLDL+ QTVAD IK KTPEEIR+ FNI+NDFTP EN WAFE Sbjct: 42 VPLQNVTGKILSIVVEYCKKHV-------------------VDEESDEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAFE 149
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: ASK15_ARATH (SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 9.700e-28 Identity = 68/130 (52.31%), Postives = 84/130 (64.62%), Query Frame = -2 Query: 217 NGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT-PXXXXXXXXENQWAFE 600 N IPL NVTG IL+ V+EYCKKHV+ D +++L +WD +F+K +D T+F LILAANYLN++GLL LTCQTVAD IK KTPEE+R+ FNI+NDFT EN WAFE Sbjct: 40 NEIPLQNVTGNILSIVLEYCKKHVDDVVDDDASEEPKKKKPDDEA--KQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLLGLTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFE 167
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: ASK19_ARATH (SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.401e-26 Identity = 67/151 (44.37%), Postives = 81/151 (53.64%), Query Frame = -2 Query: 217 NGIPLPNVTGKILAKVVEYCKKHVE----------------------VPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 600 N IP+PNVTG+ILAKV+EYCKKHVE D +E L WD F+K D T+FD+ILAANYLN++GL DL +T+AD IK TPEE+R+ FNI+NDFTP EN W FE Sbjct: 40 NKIPIPNVTGEILAKVIEYCKKHVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMKDFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAIRNENAWTFE 190
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: ASK16_ARATH (SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.076e-26 Identity = 62/127 (48.82%), Postives = 79/127 (62.20%), Query Frame = -2 Query: 217 IPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 594 IPL NVTG ILA V+EYCKKHV + D + +L++WD +F+K D T+ LILA NYLN++ LL LTCQTVAD +K +PEE+R+ FNI+ND+TP EN WAFE Sbjct: 42 IPLENVTGNILALVIEYCKKHV-LDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFE 167
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: ASK5_ARATH (SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.186e-25 Identity = 65/132 (49.24%), Postives = 81/132 (61.36%), Query Frame = -2 Query: 217 IPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQAT-LFDLILAANYLNIKGLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 594 IPL NVT KIL V++YC+KHV+ EEDLK WD DF+K + T LFD+++AANYLNI+ LLDLTC+TV AD++ GKTP+EIR FNI+ND T ENQWAF+ Sbjct: 41 IPLRNVTSKILKIVIDYCEKHVK-------------------SKEEEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQADLLSGKTPDEIRAHFNIENDLTAEEVAKIREENQWAFQ 153
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: ASK18_ARATH (SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.186e-25 Identity = 62/126 (49.21%), Postives = 78/126 (61.90%), Query Frame = -2 Query: 220 IPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFV-KVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAF 594 IPL NVTG IL+K++EY K HV P+ +D +++L SWD F+ K+D T+F +ILAANYLN +GLL QTVAD IK KTPEE+R+ FNI+NDFTP EN W F Sbjct: 42 IPLENVTGDILSKIIEYAKMHVNEPSEEDEDEEA-----------KKNLDSWDAKFMEKLDLETIFKIILAANYLNFEGLLGFASQTVADYIKDKTPEEVREIFNIENDFTPEEEEEIRKENAWTF 156
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: SKP1_SCHPO (Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe GN=skp1 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.686e-25 Identity = 57/124 (45.97%), Postives = 77/124 (62.10%), Query Frame = -2 Query: 223 IPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWA 594 IPLPNV+ +L KV+E+C+ H ++ D+ WD F+ VDQ LF+++LA+NYL+IK LLD C+TVA+MI+GK+PE+IRKTFNI NDFTP EN+WA Sbjct: 41 IPLPNVSSNVLRKVLEWCEHH------KNDLYSGTEEESDIRLKKSTDIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: SKP1_YEAST (Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae GN=SKP1 PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 2.473e-23 Identity = 57/126 (45.24%), Postives = 77/126 (61.11%), Query Frame = -2 Query: 223 IPLPNVTGKILAKVVEYCKKHVE--VPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWA 594 +P+PNV +L KV+E+ + H + P D + SWD +F+KVDQ L+++ILAANYLNIK LLD C+ VA+MI+G++PEEIR+TFNI NDFTP EN+WA Sbjct: 77 MPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRK-----------SAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWA 191
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: ASK8_ARATH (SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.149e-20 Identity = 56/128 (43.75%), Postives = 76/128 (59.38%), Query Frame = -2 Query: 217 NGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 600 N I + +T +IL V+EYC KH V A ++DL+ WD +F++ D++T+F L AAN+LN K LL L QTVADMIKG TP+++R+ FNI+ND TP EN+WAFE Sbjct: 40 NVILVLKMTSEILEMVIEYCNKH-HVDAANPCS--------------DDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE 152
BLAST of DC887588 vs. ExPASy Swiss-Prot
Match: ASK17_ARATH (SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.695e-19 Identity = 53/126 (42.06%), Postives = 71/126 (56.35%), Query Frame = -2 Query: 220 IPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXGEEDLKSWDTDFVK-VDQATLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAF 594 I L NVTGKILA ++EYCKKHV+ + + +WD +FVK +D TLF L+ AA+YL + GL +L Q +AD KT EIR+ FNI+ND+TP +N+WAF Sbjct: 42 IRLQNVTGKILAIIIEYCKKHVD------------------DVEAKNEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAIADYTADKTVNEIRELFNIENDYTPEEEEELRKKNEWAF 149 The following BLAST results are available for this feature:
BLAST of DC887588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887588 ID=DC887588; Name=DC887588; organism=Citrus sinensis; type=EST; length=601bpback to top |