CN184946

Overview
NameCN184946
Unique NameCN184946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length335
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_STRPB (Chaperone protein dnaK OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=dnaK PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 46/99 (46.46%), Postives = 72/99 (72.73%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG 316
            ++ +L+FDLGGGTFDVS+L + +G+F+V ATAGD  LGG+DFD ++++  V EFK+++  D+S +  AL+RL+ + E+AK+ LS   QT I +  +  G
Sbjct:  161 DEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDFLVAEFKKENGIDLSQDKMALQRLKDAAEKAKKDLSGVTQTQISLPFITAG 259          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_STRP8 (Chaperone protein dnaK OS=Streptococcus pyogenes serotype M18 GN=dnaK PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 46/99 (46.46%), Postives = 72/99 (72.73%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG 316
            ++ +L+FDLGGGTFDVS+L + +G+F+V ATAGD  LGG+DFD ++++  V EFK+++  D+S +  AL+RL+ + E+AK+ LS   QT I +  +  G
Sbjct:  161 DEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDFLVAEFKKENGIDLSQDKMALQRLKDAAEKAKKDLSGVTQTQISLPFITAG 259          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_STRP6 (Chaperone protein dnaK OS=Streptococcus pyogenes serotype M6 GN=dnaK PE=1 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 46/99 (46.46%), Postives = 72/99 (72.73%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG 316
            ++ +L+FDLGGGTFDVS+L + +G+F+V ATAGD  LGG+DFD ++++  V EFK+++  D+S +  AL+RL+ + E+AK+ LS   QT I +  +  G
Sbjct:  161 DEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDFLVAEFKKENGIDLSQDKMALQRLKDAAEKAKKDLSGVTQTQISLPFITAG 259          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_STRP3 (Chaperone protein dnaK OS=Streptococcus pyogenes serotype M3 GN=dnaK PE=2 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 46/99 (46.46%), Postives = 72/99 (72.73%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG 316
            ++ +L+FDLGGGTFDVS+L + +G+F+V ATAGD  LGG+DFD ++++  V EFK+++  D+S +  AL+RL+ + E+AK+ LS   QT I +  +  G
Sbjct:  161 DEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDFLVAEFKKENGIDLSQDKMALQRLKDAAEKAKKDLSGVTQTQISLPFITAG 259          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_STRP1 (Chaperone protein dnaK OS=Streptococcus pyogenes serotype M1 GN=dnaK PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 46/99 (46.46%), Postives = 72/99 (72.73%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG 316
            ++ +L+FDLGGGTFDVS+L + +G+F+V ATAGD  LGG+DFD ++++  V EFK+++  D+S +  AL+RL+ + E+AK+ LS   QT I +  +  G
Sbjct:  161 DEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDFLVAEFKKENGIDLSQDKMALQRLKDAAEKAKKDLSGVTQTQISLPFITAG 259          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_SHISS (Chaperone protein dnaK OS=Shigella sonnei (strain Ss046) GN=dnaK PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 47/98 (47.96%), Postives = 70/98 (71.43%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G + + ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFD+R++N+ V+EFK+    D+  +P A++RL+ + E+AK  LSS  QT + +
Sbjct:  186 GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_SHIFL (Chaperone protein dnaK OS=Shigella flexneri GN=dnaK PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 47/98 (47.96%), Postives = 70/98 (71.43%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G + + ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFD+R++N+ V+EFK+    D+  +P A++RL+ + E+AK  LSS  QT + +
Sbjct:  186 GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_SHIF8 (Chaperone protein dnaK OS=Shigella flexneri serotype 5b (strain 8401) GN=dnaK PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 47/98 (47.96%), Postives = 70/98 (71.43%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G + + ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFD+R++N+ V+EFK+    D+  +P A++RL+ + E+AK  LSS  QT + +
Sbjct:  186 GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_SHIDS (Chaperone protein dnaK OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=dnaK PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 47/98 (47.96%), Postives = 70/98 (71.43%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G + + ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFD+R++N+ V+EFK+    D+  +P A++RL+ + E+AK  LSS  QT + +
Sbjct:  186 GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_SHIBS (Chaperone protein dnaK OS=Shigella boydii serotype 4 (strain Sb227) GN=dnaK PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 47/98 (47.96%), Postives = 70/98 (71.43%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G + + ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFD+R++N+ V+EFK+    D+  +P A++RL+ + E+AK  LSS  QT + +
Sbjct:  186 GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
The following BLAST results are available for this feature:
BLAST of CN184946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_STRPB9.426e-2246.46Chaperone protein dnaK OS=Streptococcus pyogenes s... [more]
DNAK_STRP89.426e-2246.46Chaperone protein dnaK OS=Streptococcus pyogenes s... [more]
DNAK_STRP69.426e-2246.46Chaperone protein dnaK OS=Streptococcus pyogenes s... [more]
DNAK_STRP39.426e-2246.46Chaperone protein dnaK OS=Streptococcus pyogenes s... [more]
DNAK_STRP19.426e-2246.46Chaperone protein dnaK OS=Streptococcus pyogenes s... [more]
DNAK_SHISS9.426e-2247.96Chaperone protein dnaK OS=Shigella sonnei (strain ... [more]
DNAK_SHIFL9.426e-2247.96Chaperone protein dnaK OS=Shigella flexneri GN=dna... [more]
DNAK_SHIF89.426e-2247.96Chaperone protein dnaK OS=Shigella flexneri seroty... [more]
DNAK_SHIDS9.426e-2247.96Chaperone protein dnaK OS=Shigella dysenteriae ser... [more]
DNAK_SHIBS9.426e-2247.96Chaperone protein dnaK OS=Shigella boydii serotype... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0006G16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006G16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184946 ID=CN184946; Name=CN184946; organism=Citrus sinensis; type=EST; length=335bp
GAAGGCTACAAGTGTCGGCGAGAAGAACGTCTTGATCTTTGATCTTGGTG
GTGGTACTTTTGATGTGTCTCTTCTTACCATTGAAGAGGGTATCTTTGAA
GTTAAAGCCACAGCTGGTGATACCCATCTTGGTGGTGAGGATTTTGATAA
CAGAATGGTTAACCACTTTGTGCAAGAGTTCAAAAGAAAGCACAAGAAGG
ACATTAGTGGTAACCCCAGAGCTCTAAGGAGGTTGAGAACTTCCTGTGAA
AGAGCTAAGAGGACTCTCTCATCAACCGCCCAGACCACCATTGAGATTGA
CTCGCTTTACGAGGGTATTGACTTCTACTCCCCCA
back to top