CN184946

Overview
NameCN184946
Unique NameCN184946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length335
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_ECO24 (Chaperone protein dnaK OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=dnaK PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 47/98 (47.96%), Postives = 70/98 (71.43%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G + + ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFD+R++N+ V+EFK+    D+  +P A++RL+ + E+AK  LSS  QT + +
Sbjct:  186 GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_CYAPA (Chaperone protein dnaK OS=Cyanophora paradoxa GN=dnaK-A PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 46/95 (48.42%), Postives = 71/95 (74.74%), Query Frame = 2
Query:   23 KNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSL 307
            + +L+FDLGGGTFDVS+L + +G+FEV +T+GDTHLGG+DFD ++V+ F++EF++    ++  + +AL+RL  + E+AK  LSS  QT I +  L
Sbjct:  185 ETILVFDLGGGTFDVSILEVGDGVFEVLSTSGDTHLGGDDFDKKLVDFFIEEFQKLENINLREDQQALQRLTEAAEKAKIELSSVTQTEITLPFL 279          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_BRUSU (Chaperone protein dnaK OS=Brucella suis GN=dnaK PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 2
Query:   23 KNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            K + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V + V EFK++   D+  +  AL+RL+ + E+AK  LSS+ QT I +
Sbjct:  187 KTIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDIRLVEYLVAEFKKESGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINL 278          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_BRUO2 (Chaperone protein dnaK OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=dnaK PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 2
Query:   23 KNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            K + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V + V EFK++   D+  +  AL+RL+ + E+AK  LSS+ QT I +
Sbjct:  187 KTIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDIRLVEYLVAEFKKESGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINL 278          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_BRUME (Chaperone protein dnaK OS=Brucella melitensis GN=dnaK PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 2
Query:   23 KNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            K + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V + V EFK++   D+  +  AL+RL+ + E+AK  LSS+ QT I +
Sbjct:  187 KTIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDIRLVEYLVAEFKKESGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINL 278          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_BRUAB (Chaperone protein dnaK OS=Brucella abortus GN=dnaK PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 2
Query:   23 KNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            K + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V + V EFK++   D+  +  AL+RL+ + E+AK  LSS+ QT I +
Sbjct:  187 KTIAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDIRLVEYLVAEFKKESGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINL 278          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_BEII9 (Chaperone protein dnaK OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=dnaK PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 48/94 (51.06%), Postives = 67/94 (71.28%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G   + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+V +   EFK+++  D+  +  AL+RL+ + E+AK  LSS  QT I +
Sbjct:  185 GSGTIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDTRLVEYLADEFKKENGIDLKKDKLALQRLKEAAEKAKIELSSATQTEINL 278          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_BACME (Chaperone protein dnaK OS=Bacillus megaterium GN=dnaK PE=2 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 9.426e-22
Identity = 46/99 (46.46%), Postives = 72/99 (72.73%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG 316
            ++ VL++DLGGGTFDVS+L + +G+FEV+ATAGD  LGG+DFD  ++++ V EFK+++  D+S +  AL+RL+ + E+AK+ LS    T I +  +  G
Sbjct:  161 DQTVLVYDLGGGTFDVSILELGDGVFEVRATAGDNRLGGDDFDQVIIDYLVAEFKKENGVDLSKDKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAG 259          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_THEPX (Chaperone protein dnaK OS=Thermoanaerobacter sp. (strain X514) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21
Identity = 46/94 (48.94%), Postives = 67/94 (71.28%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G + ++++DLGGGTFDVS+L I EG+FEV AT+G+ HLGG+DFD R+++     FK++H  D+  +  AL+RL+ + ERAK  LSS   T I +
Sbjct:  161 GNQKIMVYDLGGGTFDVSILEIGEGVFEVLATSGNNHLGGDDFDQRIIDWLADNFKKEHGIDLRNDRMALQRLKDAAERAKIELSSATVTNINL 254          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_THENN (Chaperone protein dnaK OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21
Identity = 46/93 (49.46%), Postives = 70/93 (75.27%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            E+ VL++DLGGGTFDVS+L I +G+ EV ATAG+ HLGG+DFD R+++   +EFK++H  D+  + +AL+RLR + E+AK  LS+  +T + +
Sbjct:  168 EQKVLVYDLGGGTFDVSILEIGDGVIEVIATAGNNHLGGDDFDQRLIDWMAEEFKKQHGIDLREDRQALQRLRDAAEKAKIELSTKMETDVSL 260          
The following BLAST results are available for this feature:
BLAST of CN184946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_ECO249.426e-2247.96Chaperone protein dnaK OS=Escherichia coli O139:H2... [more]
DNAK_CYAPA9.426e-2248.42Chaperone protein dnaK OS=Cyanophora paradoxa GN=d... [more]
DNAK_BRUSU9.426e-2253.26Chaperone protein dnaK OS=Brucella suis GN=dnaK PE... [more]
DNAK_BRUO29.426e-2253.26Chaperone protein dnaK OS=Brucella ovis (strain AT... [more]
DNAK_BRUME9.426e-2253.26Chaperone protein dnaK OS=Brucella melitensis GN=d... [more]
DNAK_BRUAB9.426e-2253.26Chaperone protein dnaK OS=Brucella abortus GN=dnaK... [more]
DNAK_BEII99.426e-2251.06Chaperone protein dnaK OS=Beijerinckia indica subs... [more]
DNAK_BACME9.426e-2246.46Chaperone protein dnaK OS=Bacillus megaterium GN=d... [more]
DNAK_THEPX1.231e-2148.94Chaperone protein dnaK OS=Thermoanaerobacter sp. (... [more]
DNAK_THENN1.231e-2149.46Chaperone protein dnaK OS=Thermotoga neapolitana (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006G16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006G16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184946 ID=CN184946; Name=CN184946; organism=Citrus sinensis; type=EST; length=335bp
GAAGGCTACAAGTGTCGGCGAGAAGAACGTCTTGATCTTTGATCTTGGTG
GTGGTACTTTTGATGTGTCTCTTCTTACCATTGAAGAGGGTATCTTTGAA
GTTAAAGCCACAGCTGGTGATACCCATCTTGGTGGTGAGGATTTTGATAA
CAGAATGGTTAACCACTTTGTGCAAGAGTTCAAAAGAAAGCACAAGAAGG
ACATTAGTGGTAACCCCAGAGCTCTAAGGAGGTTGAGAACTTCCTGTGAA
AGAGCTAAGAGGACTCTCTCATCAACCGCCCAGACCACCATTGAGATTGA
CTCGCTTTACGAGGGTATTGACTTCTACTCCCCCA
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