CN184946

Overview
NameCN184946
Unique NameCN184946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length335
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_MANSM (Chaperone protein dnaK OS=Mannheimia succiniciproducens (strain MBEL55E) GN=dnaK PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21
Identity = 48/98 (48.98%), Postives = 70/98 (71.43%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G + + ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFDNR++N+ V EFK++   D+  +P A++RL+ + E+AK  LSS  QT + +
Sbjct:  186 GNQTIAVYDLGGGTFDLSIIEIDEVGGEKTFEVLATNGDTHLGGEDFDNRVINYLVDEFKKEQGVDLRNDPLAMQRLKEAGEKAKIELSSAQQTDVNL 283          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_LISW6 (Chaperone protein dnaK OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21
Identity = 45/99 (45.45%), Postives = 71/99 (71.72%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG 316
            ++ +L+FDLGGGTFDVS+L + +G+FEV +TAGD  LGG+DFD +++++ V EFK+ +  D+S +  AL+RL+ + E+AK+ LS    T I +  +  G
Sbjct:  161 DQTILVFDLGGGTFDVSILELGDGVFEVHSTAGDNELGGDDFDKKIIDYLVAEFKKDNGVDLSQDKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAG 259          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_LACJO (Chaperone protein dnaK OS=Lactobacillus johnsonii GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21
Identity = 45/99 (45.45%), Postives = 72/99 (72.73%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG 316
            ++ VL++DLGGGTFDVS+L + +G+F+V +T GDTHLGG+DFD R+++  +Q FK ++  D+S +  AL+RL+ + E+AK+ LS  + T I +  +  G
Sbjct:  162 DEKVLVYDLGGGTFDVSILQLGDGVFQVLSTNGDTHLGGDDFDQRIMDWLIQNFKEENGVDLSNDKMALQRLKDAAEKAKKDLSGVSSTHISLPFISAG 260          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_HYPNA (Chaperone protein dnaK OS=Hyphomonas neptunium (strain ATCC 15444) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21
Identity = 48/94 (51.06%), Postives = 66/94 (70.21%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G K + ++DLGGGTFDVSLL I +G+FEV +T GDT LGGEDFD R+V+    EFK++   D+ G+  AL+RL+   E+AK+ LSS  Q  + +
Sbjct:  185 GNKTIAVYDLGGGTFDVSLLEIGDGVFEVLSTNGDTFLGGEDFDLRVVDFLASEFKKEQGIDLKGDKLALQRLKEEAEKAKKELSSATQYEVNL 278          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_HAES2 (Chaperone protein dnaK OS=Haemophilus somnus (strain 2336) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21
Identity = 48/98 (48.98%), Postives = 70/98 (71.43%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G + + ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFDNR++N+ V EFK++   D+  +P A++RL+ + E+AK  LSS  QT + +
Sbjct:  186 GNQTIAVYDLGGGTFDLSIIEIDEVGGEKTFEVLATNGDTHLGGEDFDNRVINYLVDEFKKEQGVDLRNDPLAMQRLKEAGEKAKIELSSAQQTDVNL 283          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_HAES1 (Chaperone protein dnaK OS=Haemophilus somnus (strain 129Pt) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21
Identity = 48/98 (48.98%), Postives = 70/98 (71.43%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G + + ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFDNR++N+ V EFK++   D+  +P A++RL+ + E+AK  LSS  QT + +
Sbjct:  186 GNQTIAVYDLGGGTFDLSIIEIDEVGGEKTFEVLATNGDTHLGGEDFDNRVINYLVDEFKKEQGVDLRNDPLAMQRLKEAGEKAKIELSSAQQTDVNL 283          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_DESVM (Chaperone protein dnaK OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21
Identity = 44/92 (47.83%), Postives = 71/92 (77.17%), Query Frame = 2
Query:   23 KNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            + + +FDLGGGTFD+S+L + + + EV+AT GDT LGGEDFD R++N+ V+EF+R++  D+S +  AL+RL+ + E+AK+ LS++ +T I +
Sbjct:  186 EKIAVFDLGGGTFDISILEVGDNVVEVRATNGDTFLGGEDFDQRVINYLVEEFRRENGVDLSKDRMALQRLKEAAEKAKKDLSTSMETEINL 277          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_CLOPH (Chaperone protein dnaK OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21
Identity = 45/93 (48.39%), Postives = 67/93 (72.04%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            E+ ++++DLGGGTFDVS++ I +G+ EV AT+GD  LGG+DFD R+  +F+ EFK+    D+S +  AL+RLR + E+AK+ LSS   T I +
Sbjct:  162 EQKIMVYDLGGGTFDVSIIEIGDGVIEVLATSGDNRLGGDDFDERVTRYFIDEFKKAEGVDLSTDKMALQRLREAAEKAKKELSSATTTNINL 254          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_BUCAT (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21
Identity = 47/98 (47.96%), Postives = 70/98 (71.43%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G + + ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFD+R++N+ V EFK++   D+  +P +++RL+ S E+AK  LSS  QT + +
Sbjct:  186 GNRTIAVYDLGGGTFDISIIEIDEVDKEKTFEVLATNGDTHLGGEDFDSRLINYLVTEFKKEQGIDLRNDPLSMQRLKESAEKAKIELSSAQQTDVNL 283          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_BUCAI (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21
Identity = 47/98 (47.96%), Postives = 70/98 (71.43%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G + + ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFD+R++N+ V EFK++   D+  +P +++RL+ S E+AK  LSS  QT + +
Sbjct:  186 GNRTIAVYDLGGGTFDISIIEIDEVDKEKTFEVLATNGDTHLGGEDFDSRLINYLVTEFKKEQGIDLRNDPLSMQRLKESAEKAKIELSSAQQTDVNL 283          
The following BLAST results are available for this feature:
BLAST of CN184946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_MANSM1.231e-2148.98Chaperone protein dnaK OS=Mannheimia succiniciprod... [more]
DNAK_LISW61.231e-2145.45Chaperone protein dnaK OS=Listeria welshimeri sero... [more]
DNAK_LACJO1.231e-2145.45Chaperone protein dnaK OS=Lactobacillus johnsonii ... [more]
DNAK_HYPNA1.231e-2151.06Chaperone protein dnaK OS=Hyphomonas neptunium (st... [more]
DNAK_HAES21.231e-2148.98Chaperone protein dnaK OS=Haemophilus somnus (stra... [more]
DNAK_HAES11.231e-2148.98Chaperone protein dnaK OS=Haemophilus somnus (stra... [more]
DNAK_DESVM1.231e-2147.83Chaperone protein dnaK OS=Desulfovibrio vulgaris (... [more]
DNAK_CLOPH1.231e-2148.39Chaperone protein dnaK OS=Clostridium phytoferment... [more]
DNAK_BUCAT1.231e-2147.96Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
DNAK_BUCAI1.231e-2147.96Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006G16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006G16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184946 ID=CN184946; Name=CN184946; organism=Citrus sinensis; type=EST; length=335bp
GAAGGCTACAAGTGTCGGCGAGAAGAACGTCTTGATCTTTGATCTTGGTG
GTGGTACTTTTGATGTGTCTCTTCTTACCATTGAAGAGGGTATCTTTGAA
GTTAAAGCCACAGCTGGTGATACCCATCTTGGTGGTGAGGATTTTGATAA
CAGAATGGTTAACCACTTTGTGCAAGAGTTCAAAAGAAAGCACAAGAAGG
ACATTAGTGGTAACCCCAGAGCTCTAAGGAGGTTGAGAACTTCCTGTGAA
AGAGCTAAGAGGACTCTCTCATCAACCGCCCAGACCACCATTGAGATTGA
CTCGCTTTACGAGGGTATTGACTTCTACTCCCCCA
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