CN184946

Overview
NameCN184946
Unique NameCN184946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length335
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_BUCA5 (Chaperone protein dnaK OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21
Identity = 47/98 (47.96%), Postives = 70/98 (71.43%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G + + ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFD+R++N+ V EFK++   D+  +P +++RL+ S E+AK  LSS  QT + +
Sbjct:  186 GNRTIAVYDLGGGTFDISIIEIDEVDKEKTFEVLATNGDTHLGGEDFDSRLINYLVTEFKKEQGIDLRNDPLSMQRLKESAEKAKIELSSAQQTDVNL 283          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_BACSK (Chaperone protein dnaK OS=Bacillus clausii (strain KSM-K16) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21
Identity = 45/93 (48.39%), Postives = 70/93 (75.27%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            ++ +L++DLGGGTFDVS+L + +G FEVKAT+GD  LGG+DFD  +++H V EFK+++  D+S +  A++RL+ + E+AK+ LS   QT I +
Sbjct:  160 DQTILVYDLGGGTFDVSILELGDGFFEVKATSGDNKLGGDDFDEVIMDHLVAEFKKENGIDLSQDKMAMQRLKDAAEKAKKDLSGVTQTQISL 252          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_AZOC5 (Chaperone protein dnaK OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21
Identity = 48/90 (53.33%), Postives = 66/90 (73.33%), Query Frame = 2
Query:   29 VLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            + ++DLGGGTFDVS+L I +G+FEVK+T GDT LGGEDFD R+VN+   EFK++   D+  +  AL+RL+ + E+AK  LSS  QT I +
Sbjct:  189 IAVYDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVNYLADEFKKEQGIDLRNDKLALQRLKEAAEKAKIELSSATQTEINL 278          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_ACTSZ (Chaperone protein dnaK OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21
Identity = 48/98 (48.98%), Postives = 70/98 (71.43%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G + + ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFDNR++N+ V EFK++   D+  +P A++RL+ + E+AK  LSS  QT + +
Sbjct:  186 GNQTIAVYDLGGGTFDLSIIEIDEVGGEKTFEVLATNGDTHLGGEDFDNRVINYLVDEFKKEQGVDLRNDPLAMQRLKEAGEKAKIELSSAQQTDVNL 283          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK1_PROMM (Chaperone protein dnaK1 OS=Prochlorococcus marinus (strain MIT 9313) GN=dnaK1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.231e-21
Identity = 49/100 (49.00%), Postives = 67/100 (67.00%), Query Frame = 2
Query:   23 KNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGID 322
            + VL+FDLGGGTFDVSL+ +  G+F+VKAT GDT LGG DFD R+V+   + FK KH  D+  + +AL+RL  + E+AK+ LS    T I +  +  G D
Sbjct:  187 RRVLVFDLGGGTFDVSLMRVANGVFDVKATCGDTQLGGNDFDQRIVDWLAEAFKTKHGLDLRRDRQALQRLIEAAEKAKQELSGVLSTPISLPFIATGPD 286          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_SODGM (Chaperone protein dnaK OS=Sodalis glossinidius (strain morsitans) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 47/98 (47.96%), Postives = 69/98 (70.41%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V EFK+    D+  +P A++RL+ + E+AK  LSS  QT + +
Sbjct:  186 GNRTIAVYDLGGGTFDISIIEIDDVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_SINMW (Chaperone protein dnaK OS=Sinorhizobium medicae (strain WSM419) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 47/92 (51.09%), Postives = 67/92 (72.83%), Query Frame = 2
Query:   23 KNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+V +   EFK++   D+  +  AL+RL+ + E+AK  LSS+ QT I +
Sbjct:  187 KTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLASEFKKEQGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINL 278          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_RHIME (Chaperone protein dnaK OS=Rhizobium meliloti GN=dnaK PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 47/92 (51.09%), Postives = 67/92 (72.83%), Query Frame = 2
Query:   23 KNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            K + ++DLGGGTFD+S+L I +G+FEVK+T GDT LGGEDFD R+V +   EFK++   D+  +  AL+RL+ + E+AK  LSS+ QT I +
Sbjct:  187 KTIAVYDLGGGTFDISVLEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLASEFKKEQGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINL 278          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_PROMH (Chaperone protein dnaK OS=Proteus mirabilis (strain HI4320) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 46/99 (46.46%), Postives = 71/99 (71.72%), Query Frame = 2
Query:   14 VGEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            VG + + ++DLGGGTFD+S++ I+E      +EV +T GDTHLGGEDFD+R++N+ V EFK++   D+  +P A++RL+ + E+AK  LSS  QT + +
Sbjct:  185 VGNRTIAVYDLGGGTFDISIIEIDEVDGEKTYEVLSTNGDTHLGGEDFDSRLINYLVDEFKKEQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNL 283          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_PROAC (Chaperone protein dnaK OS=Propionibacterium acnes GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 49/99 (49.49%), Postives = 70/99 (70.71%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG 316
            ++ VL+FDLGGGTFDVSLL I +G+FEVKAT GD HLGG+D+D R+V+  V +FK  +  D++ +  A +RL+ + ERAK  LS  ++T I +  +  G
Sbjct:  163 DQTVLVFDLGGGTFDVSLLDISDGVFEVKATNGDNHLGGDDWDQRIVDWLVTQFKNANGIDLAADKMAKQRLQEAAERAKIELSQASETHINLPYITAG 261          
The following BLAST results are available for this feature:
BLAST of CN184946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BUCA51.231e-2147.96Chaperone protein dnaK OS=Buchnera aphidicola subs... [more]
DNAK_BACSK1.231e-2148.39Chaperone protein dnaK OS=Bacillus clausii (strain... [more]
DNAK_AZOC51.231e-2153.33Chaperone protein dnaK OS=Azorhizobium caulinodans... [more]
DNAK_ACTSZ1.231e-2148.98Chaperone protein dnaK OS=Actinobacillus succinoge... [more]
DNAK1_PROMM1.231e-2149.00Chaperone protein dnaK1 OS=Prochlorococcus marinus... [more]
DNAK_SODGM1.608e-2147.96Chaperone protein dnaK OS=Sodalis glossinidius (st... [more]
DNAK_SINMW1.608e-2151.09Chaperone protein dnaK OS=Sinorhizobium medicae (s... [more]
DNAK_RHIME1.608e-2151.09Chaperone protein dnaK OS=Rhizobium meliloti GN=dn... [more]
DNAK_PROMH1.608e-2146.46Chaperone protein dnaK OS=Proteus mirabilis (strai... [more]
DNAK_PROAC1.608e-2149.49Chaperone protein dnaK OS=Propionibacterium acnes ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006G16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006G16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184946 ID=CN184946; Name=CN184946; organism=Citrus sinensis; type=EST; length=335bp
GAAGGCTACAAGTGTCGGCGAGAAGAACGTCTTGATCTTTGATCTTGGTG
GTGGTACTTTTGATGTGTCTCTTCTTACCATTGAAGAGGGTATCTTTGAA
GTTAAAGCCACAGCTGGTGATACCCATCTTGGTGGTGAGGATTTTGATAA
CAGAATGGTTAACCACTTTGTGCAAGAGTTCAAAAGAAAGCACAAGAAGG
ACATTAGTGGTAACCCCAGAGCTCTAAGGAGGTTGAGAACTTCCTGTGAA
AGAGCTAAGAGGACTCTCTCATCAACCGCCCAGACCACCATTGAGATTGA
CTCGCTTTACGAGGGTATTGACTTCTACTCCCCCA
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