CN184946

Overview
NameCN184946
Unique NameCN184946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length335
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_METBU (Chaperone protein dnaK OS=Methanococcoides burtonii (strain DSM 6242) GN=dnaK PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 45/94 (47.87%), Postives = 67/94 (71.28%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G+  +L++DLGGGTFDVS+L + +G+FEV +T+G+THLGG+DFD R+    V+EFK+    D+S +  AL+RL  + E+AK  LS  A T + +
Sbjct:  163 GDHKILVYDLGGGTFDVSILELGDGVFEVLSTSGNTHLGGDDFDQRITEFLVEEFKKAEGIDLSNDKAALQRLNDAAEKAKIELSGVASTNVNL 256          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_LISMO (Chaperone protein dnaK OS=Listeria monocytogenes GN=dnaK PE=2 SV=4)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 45/99 (45.45%), Postives = 71/99 (71.72%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG 316
            ++ +L+FDLGGGTFDVS+L + +G+FEV +TAGD  LGG+DFD +++++ V EFK+ +  D+S +  AL+RL+ + E+AK+ LS    T I +  +  G
Sbjct:  161 DQTILVFDLGGGTFDVSILELGDGVFEVHSTAGDNELGGDDFDKKIIDYLVAEFKKDNGIDLSQDKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAG 259          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_LISMH (Chaperone protein dnaK OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 45/99 (45.45%), Postives = 71/99 (71.72%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG 316
            ++ +L+FDLGGGTFDVS+L + +G+FEV +TAGD  LGG+DFD +++++ V EFK+ +  D+S +  AL+RL+ + E+AK+ LS    T I +  +  G
Sbjct:  161 DQTILVFDLGGGTFDVSILELGDGVFEVHSTAGDNELGGDDFDKKIIDYLVAEFKKDNGIDLSQDKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAG 259          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_LISMF (Chaperone protein dnaK OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dnaK PE=2 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 45/99 (45.45%), Postives = 71/99 (71.72%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG 316
            ++ +L+FDLGGGTFDVS+L + +G+FEV +TAGD  LGG+DFD +++++ V EFK+ +  D+S +  AL+RL+ + E+AK+ LS    T I +  +  G
Sbjct:  161 DQTILVFDLGGGTFDVSILELGDGVFEVHSTAGDNELGGDDFDKKIIDYLVAEFKKDNGIDLSQDKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAG 259          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_LISMC (Chaperone protein dnaK OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 45/99 (45.45%), Postives = 71/99 (71.72%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG 316
            ++ +L+FDLGGGTFDVS+L + +G+FEV +TAGD  LGG+DFD +++++ V EFK+ +  D+S +  AL+RL+ + E+AK+ LS    T I +  +  G
Sbjct:  161 DQTILVFDLGGGTFDVSILELGDGVFEVHSTAGDNELGGDDFDKKIIDYLVAEFKKDNGIDLSQDKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAG 259          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_LISIN (Chaperone protein dnaK OS=Listeria innocua GN=dnaK PE=2 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 45/99 (45.45%), Postives = 71/99 (71.72%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG 316
            ++ +L+FDLGGGTFDVS+L + +G+FEV +TAGD  LGG+DFD +++++ V EFK+ +  D+S +  AL+RL+ + E+AK+ LS    T I +  +  G
Sbjct:  161 DQTILVFDLGGGTFDVSILELGDGVFEVHSTAGDNELGGDDFDKKIIDYLVAEFKKDNGIDLSQDKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAG 259          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_LEUCK (Chaperone protein dnaK OS=Leuconostoc citreum (strain KM20) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 44/99 (44.44%), Postives = 72/99 (72.73%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG 316
            ++ +L++DLGGGTFDVS+L + +G+FEV +T GDTHLGG+DFDN+++++   +FK  +  D+  +  AL+RL+ + E AK+TLSS  +  I++  +  G
Sbjct:  162 DEKILVYDLGGGTFDVSILELGDGVFEVLSTNGDTHLGGDDFDNKIIDYLAAQFKADNGIDLKDDKLALQRLKDAAESAKKTLSSANEAQIDLPFIASG 260          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_EXIS2 (Chaperone protein dnaK OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 45/99 (45.45%), Postives = 72/99 (72.73%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEG 316
            +  +LI+DLGGGTFDVS+L + +G+FEV +TAGD+ LGG+DFD ++++H V EFK+ +  D++ +  AL+RL+ + E+AK+ LS  + T I +  +  G
Sbjct:  160 DHTILIYDLGGGTFDVSILELGDGVFEVVSTAGDSRLGGDDFDQKIIDHLVAEFKKDNGIDLAQDKMALQRLKDAAEKAKKDLSGVSSTQISLPFITAG 258          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_DESDG (Chaperone protein dnaK OS=Desulfovibrio desulfuricans (strain G20) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 44/92 (47.83%), Postives = 71/92 (77.17%), Query Frame = 2
Query:   23 KNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            + + +FDLGGGTFD+S+L + + + EV+AT GDT LGGEDFD R++N+ V+EF+R++  D+S +  AL+RL+ + E+AK+ LS++ +T I +
Sbjct:  186 EKIAVFDLGGGTFDISILEVGDNVVEVRATNGDTFLGGEDFDQRVINYLVEEFRRENGIDLSRDRMALQRLKEAAEKAKKDLSTSMETEINL 277          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_DESAA (Chaperone protein dnaK OS=Desulfatibacillum alkenivorans (strain AK-01) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 45/93 (48.39%), Postives = 68/93 (73.12%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            ++ + +FDLGGGTFDVS+L I EG+FEVK+T GDTHLGGEDFD  ++++   EFK+    D+  +  AL+RL+ + E+AK  LS++ +T + +
Sbjct:  186 DEKIAVFDLGGGTFDVSILEIGEGVFEVKSTNGDTHLGGEDFDLLVIDYLADEFKKDQGIDLRSDKMALQRLKEAAEKAKMELSTSVETEVNL 278          
The following BLAST results are available for this feature:
BLAST of CN184946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_METBU1.608e-2147.87Chaperone protein dnaK OS=Methanococcoides burtoni... [more]
DNAK_LISMO1.608e-2145.45Chaperone protein dnaK OS=Listeria monocytogenes G... [more]
DNAK_LISMH1.608e-2145.45Chaperone protein dnaK OS=Listeria monocytogenes s... [more]
DNAK_LISMF1.608e-2145.45Chaperone protein dnaK OS=Listeria monocytogenes s... [more]
DNAK_LISMC1.608e-2145.45Chaperone protein dnaK OS=Listeria monocytogenes s... [more]
DNAK_LISIN1.608e-2145.45Chaperone protein dnaK OS=Listeria innocua GN=dnaK... [more]
DNAK_LEUCK1.608e-2144.44Chaperone protein dnaK OS=Leuconostoc citreum (str... [more]
DNAK_EXIS21.608e-2145.45Chaperone protein dnaK OS=Exiguobacterium sibiricu... [more]
DNAK_DESDG1.608e-2147.83Chaperone protein dnaK OS=Desulfovibrio desulfuric... [more]
DNAK_DESAA1.608e-2148.39Chaperone protein dnaK OS=Desulfatibacillum alkeni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006G16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006G16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184946 ID=CN184946; Name=CN184946; organism=Citrus sinensis; type=EST; length=335bp
GAAGGCTACAAGTGTCGGCGAGAAGAACGTCTTGATCTTTGATCTTGGTG
GTGGTACTTTTGATGTGTCTCTTCTTACCATTGAAGAGGGTATCTTTGAA
GTTAAAGCCACAGCTGGTGATACCCATCTTGGTGGTGAGGATTTTGATAA
CAGAATGGTTAACCACTTTGTGCAAGAGTTCAAAAGAAAGCACAAGAAGG
ACATTAGTGGTAACCCCAGAGCTCTAAGGAGGTTGAGAACTTCCTGTGAA
AGAGCTAAGAGGACTCTCTCATCAACCGCCCAGACCACCATTGAGATTGA
CTCGCTTTACGAGGGTATTGACTTCTACTCCCCCA
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