CN184946

Overview
NameCN184946
Unique NameCN184946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length335
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_CLOAB (Chaperone protein dnaK OS=Clostridium acetobutylicum GN=dnaK PE=2 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 44/92 (47.83%), Postives = 71/92 (77.17%), Query Frame = 2
Query:   23 KNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            + +L++DLGGGTFDVS+L + +G+FEVK+T G+THLGG+DFD +++++  +EFK+ +  D+  +  AL+RL+ + E+AK  LSS+ QT I +
Sbjct:  164 QKILVYDLGGGTFDVSVLELGDGVFEVKSTNGNTHLGGDDFDEKIMDYIAEEFKKDNGIDLRNDKMALQRLKEAAEKAKIELSSSTQTNINL 255          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTR (Chaperone protein dnaK OS=Chlamydia trachomatis GN=dnaK PE=1 SV=4)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 50/106 (47.17%), Postives = 73/106 (68.87%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSP 334
            G+K + +FDLGGGTFD+S+L I +G+FEV +T GDTHLGG+DFD  ++N  + EFK++   D+S +  AL+RL+ + E+AK  LS  + T  EI+  +  ID   P
Sbjct:  188 GDKKIAVFDLGGGTFDISILEIGDGVFEVLSTNGDTHLGGDDFDGVIINWMLDEFKKQEGIDLSKDNMALQRLKDAAEKAKIELSGVSST--EINQPFITIDANGP 291          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTB (Chaperone protein dnaK OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 50/106 (47.17%), Postives = 73/106 (68.87%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSP 334
            G+K + +FDLGGGTFD+S+L I +G+FEV +T GDTHLGG+DFD  ++N  + EFK++   D+S +  AL+RL+ + E+AK  LS  + T  EI+  +  ID   P
Sbjct:  188 GDKKIAVFDLGGGTFDISILEIGDGVFEVLSTNGDTHLGGDDFDGVIINWMLDEFKKQEGIDLSKDNMALQRLKDAAEKAKIELSGVSST--EINQPFITIDANGP 291          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_CHLTA (Chaperone protein dnaK OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 50/106 (47.17%), Postives = 73/106 (68.87%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSP 334
            G+K + +FDLGGGTFD+S+L I +G+FEV +T GDTHLGG+DFD  ++N  + EFK++   D+S +  AL+RL+ + E+AK  LS  + T  EI+  +  ID   P
Sbjct:  188 GDKKIAVFDLGGGTFDISILEIGDGVFEVLSTNGDTHLGGDDFDGVIINWMLDEFKKQEGIDLSKDNMALQRLKDAAEKAKIELSGVSST--EINQPFITIDANGP 291          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_CHLT2 (Chaperone protein dnaK OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 50/106 (47.17%), Postives = 73/106 (68.87%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSP 334
            G+K + +FDLGGGTFD+S+L I +G+FEV +T GDTHLGG+DFD  ++N  + EFK++   D+S +  AL+RL+ + E+AK  LS  + T  EI+  +  ID   P
Sbjct:  188 GDKKIAVFDLGGGTFDISILEIGDGVFEVLSTNGDTHLGGDDFDGVIINWMLDEFKKQEGIDLSKDNMALQRLKDAAEKAKIELSGVSST--EINQPFITIDANGP 291          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_BAUCH (Chaperone protein dnaK OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 46/99 (46.46%), Postives = 70/99 (70.71%), Query Frame = 2
Query:   14 VGEKNVLIFDLGGGTFDVSLLTIE----EGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            +G + + ++DLGGGTFD+S++ I+    E  FEV AT GDTHLGGEDFD+R++N+ V EFK+    D+  +P A++RL+ + E+AK  LS+  QT + +
Sbjct:  185 IGNRTIAVYDLGGGTFDISIIEIDDVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVDEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSAAQQTDVNL 283          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_ALTMD (Chaperone protein dnaK OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.608e-21
Identity = 49/98 (50.00%), Postives = 71/98 (72.45%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G+  V ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFDNR++N+ V+EFK+    D+  +P A++RL+ + E+AK  LSS+ QT + +
Sbjct:  186 GDNVVAVYDLGGGTFDISIIEIDEVDGEHTFEVLATNGDTHLGGEDFDNRVINYLVEEFKKDQGIDLRKDPLAMQRLKEAGEKAKIELSSSQQTEVNL 283          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: HSP7S_PEA (Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.100e-21
Identity = 47/92 (51.09%), Postives = 68/92 (73.91%), Query Frame = 2
Query:   23 KNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            + +L+FDLGGGTFDVS+L + +G+FEV +T+GDTHLGG+DFD R+V+    +FKR    D+  + +AL+RL  + E+AK  LSS +QT I +
Sbjct:  253 ETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAGDFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLSQTNISL 344          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_VIBHB (Chaperone protein dnaK OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=dnaK PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.100e-21
Identity = 46/100 (46.00%), Postives = 72/100 (72.00%), Query Frame = 2
Query:   11 SVGEKNVLIFDLGGGTFDVSLLTIEE----GIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            S G++ + ++DLGGGTFD+S++ I+E      FEV AT GDTHLGGEDFD R++N+ V EF ++   ++  +P A++R++ + E+AK  LSST+QT + +
Sbjct:  183 SGGDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLATNGDTHLGGEDFDTRLINYLVDEFNKEQGINLKNDPLAMQRVKEAAEKAKIELSSTSQTDVNL 282          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: DNAK_SHEDO (Chaperone protein dnaK OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=dnaK PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.100e-21
Identity = 48/98 (48.98%), Postives = 68/98 (69.39%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEG----IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 298
            G+  V ++DLGGGTFD+S++ I+       FEV AT GDTHLGGEDFDNR++N+   EFK+    D+  +P A++RL+ + E+AK  LSST QT + +
Sbjct:  185 GDNIVAVYDLGGGTFDISIIEIDSNDGDQTFEVLATNGDTHLGGEDFDNRLINYLADEFKKDQGLDLRRDPLAMQRLKEAAEKAKIELSSTNQTEVNL 282          
The following BLAST results are available for this feature:
BLAST of CN184946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CLOAB1.608e-2147.83Chaperone protein dnaK OS=Clostridium acetobutylic... [more]
DNAK_CHLTR1.608e-2147.17Chaperone protein dnaK OS=Chlamydia trachomatis GN... [more]
DNAK_CHLTB1.608e-2147.17Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_CHLTA1.608e-2147.17Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_CHLT21.608e-2147.17Chaperone protein dnaK OS=Chlamydia trachomatis (s... [more]
DNAK_BAUCH1.608e-2146.46Chaperone protein dnaK OS=Baumannia cicadellinicol... [more]
DNAK_ALTMD1.608e-2150.00Chaperone protein dnaK OS=Alteromonas macleodii (s... [more]
HSP7S_PEA2.100e-2151.09Stromal 70 kDa heat shock-related protein, chlorop... [more]
DNAK_VIBHB2.100e-2146.00Chaperone protein dnaK OS=Vibrio harveyi (strain A... [more]
DNAK_SHEDO2.100e-2148.98Chaperone protein dnaK OS=Shewanella denitrificans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006G16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006G16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184946 ID=CN184946; Name=CN184946; organism=Citrus sinensis; type=EST; length=335bp
GAAGGCTACAAGTGTCGGCGAGAAGAACGTCTTGATCTTTGATCTTGGTG
GTGGTACTTTTGATGTGTCTCTTCTTACCATTGAAGAGGGTATCTTTGAA
GTTAAAGCCACAGCTGGTGATACCCATCTTGGTGGTGAGGATTTTGATAA
CAGAATGGTTAACCACTTTGTGCAAGAGTTCAAAAGAAAGCACAAGAAGG
ACATTAGTGGTAACCCCAGAGCTCTAAGGAGGTTGAGAACTTCCTGTGAA
AGAGCTAAGAGGACTCTCTCATCAACCGCCCAGACCACCATTGAGATTGA
CTCGCTTTACGAGGGTATTGACTTCTACTCCCCCA
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