CN184946

Overview
NameCN184946
Unique NameCN184946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length335
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2456 contig Csv1_Contig2456:1..336. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 4.646e-45
Identity = 87/105 (82.86%), Postives = 99/105 (94.29%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYS 331
            GE+NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLG EDFDNRMVNHFV EFKR  KKD++ NPRALRRLRT+CERAKRTLSS++Q +IEIDSL+EGIDFY+
Sbjct:  191 GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG-EDFDNRMVNHFVAEFKRNDKKDLASNPRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYT 294          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: HSP7B_DROME (Heat shock 70 kDa protein cognate 2 OS=Drosophila melanogaster GN=Hsc70-2 PE=1 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 6.067e-45
Identity = 85/106 (80.19%), Postives = 99/106 (93.40%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYS 331
            GE+NVLIFDLGGGTFDVS+L+I+EG +FEVKATAGDTHLGGEDFDNR+VNHF +EFKRKHK DI GN RALRRLRT+CERAKRTLSS+ + ++EID+L+EGIDFYS
Sbjct:  191 GERNVLIFDLGGGTFDVSVLSIDEGSLFEVKATAGDTHLGGEDFDNRLVNHFAEEFKRKHKSDIKGNARALRRLRTACERAKRTLSSSTEASLEIDALHEGIDFYS 296          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: HSP77_HUMAN (Putative heat shock 70 kDa protein 7 OS=Homo sapiens GN=HSPA7 PE=5 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 6.067e-45
Identity = 82/104 (78.85%), Postives = 98/104 (94.23%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFY 328
            G++NVLIFDLGGGTFDVS+L+I+ G+FEVKATAGDTHLGGEDFDNR+VNHF++EF+RKH KD+SGN RALRRLRT+CERAKRT SS+ Q T+EIDSL+EG+DFY
Sbjct:  193 GKRNVLIFDLGGGTFDVSVLSIDAGVFEVKATAGDTHLGGEDFDNRLVNHFMEEFRRKHGKDLSGNKRALRRLRTACERAKRTPSSSTQATLEIDSLFEGVDFY 296          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 6.067e-45
Identity = 87/105 (82.86%), Postives = 98/105 (93.33%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYS 331
            GE+NVLIFDLGGGTFDVSLL+IEEGIFEVK+TA DTHLGGEDFDNR+V+HF QEFKRKH+KDI+ N RALRRLRT+CERAKRTLSS+AQ  IEIDSL++GIDF S
Sbjct:  193 GERNVLIFDLGGGTFDVSLLSIEEGIFEVKSTARDTHLGGEDFDNRLVDHFTQEFKRKHRKDITENQRALRRLRTACERAKRTLSSSAQAYIEIDSLFDGIDFNS 297          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 7.924e-45
Identity = 86/107 (80.37%), Postives = 98/107 (91.59%), Query Frame = 2
Query:   11 SVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYS 331
            S  E+NVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD+R+VN FV EFKRK+KKD++ N R+LRRLRT+CERAKRTLSS  QTT+EIDSL +GID+Y+
Sbjct:  196 SKSERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNFFVSEFKRKYKKDVTSNARSLRRLRTACERAKRTLSSGTQTTVEIDSLIDGIDYYA 302          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 1.765e-44
Identity = 84/105 (80.00%), Postives = 98/105 (93.33%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYS 331
            GE+NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNRMV+HFV+EF++K+ KDI  N RALRRLRT+CERAKRTLSS+AQT +EIDSL +G DFY+
Sbjct:  189 GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVDHFVKEFQKKYNKDIRSNKRALRRLRTACERAKRTLSSSAQTNLEIDSLCDGTDFYT 293          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 3.933e-44
Identity = 84/106 (79.25%), Postives = 99/106 (93.40%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYS 331
            GE+NVLIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNRMV HFV+EFKRKHKKD+S N RALRRLRT+CERAKRTLSS+ + TIEID+L +GID+Y+
Sbjct:  189 GERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRMVGHFVEEFKRKHKKDLSKNARALRRLRTACERAKRTLSSSTEATIEIDALMDGIDYYT 294          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 6.708e-44
Identity = 85/105 (80.95%), Postives = 99/105 (94.29%), Query Frame = 2
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHK-KDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYS 331
            E+NVLIFDLGGGTFDVS+L+IE+GIFEVK+TAGDTHLGGEDFD+R+VNHFV+EFKRKHK KD++ N RA+RRLRT+CERAKRTLSS+AQ  IEIDSL EGIDFY+
Sbjct:  193 ERNVLIFDLGGGTFDVSILSIEDGIFEVKSTAGDTHLGGEDFDSRLVNHFVEEFKRKHKGKDLTTNKRAVRRLRTACERAKRTLSSSAQANIEIDSLLEGIDFYT 297          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 2.549e-43
Identity = 88/106 (83.02%), Postives = 95/106 (89.62%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKK-DISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYS 331
            GE+NVLIFDLGGGTFDVSLLTIEEGIFEVK+TAGDTHLGGEDFDNR+VNHFV EFKRK KK   +   RALRR  T+CERAKRTLSS AQT+IEIDSLYEGIDFY+
Sbjct:  189 GERNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNHFVSEFKRKFKKISPAERARALRRSPTACERAKRTLSSAAQTSIEIDSLYEGIDFYT 294          
BLAST of CN184946 vs. ExPASy Swiss-Prot
Match: HSP68_DROME (Heat shock protein 68 OS=Drosophila melanogaster GN=Hsp68 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 2.549e-43
Identity = 82/106 (77.36%), Postives = 98/106 (92.45%), Query Frame = 2
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYS 331
            GE+NVLIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+VNHF +EFKRK+KKD+  NPRALRRLRT+ ERAKRTLSS+ + ++EID+LYEG DFYS
Sbjct:  188 GERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEASLEIDALYEGHDFYS 293          
The following BLAST results are available for this feature:
BLAST of CN184946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_BRUMA4.646e-4582.86Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
HSP7B_DROME6.067e-4580.19Heat shock 70 kDa protein cognate 2 OS=Drosophila ... [more]
HSP77_HUMAN6.067e-4578.85Putative heat shock 70 kDa protein 7 OS=Homo sapie... [more]
HSP70_BRELC6.067e-4582.86Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP70_PYRSA7.924e-4580.37Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP70_SCHMA1.765e-4480.00Heat shock 70 kDa protein homolog OS=Schistosoma m... [more]
HSP74_ANOAL3.933e-4479.25Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP70_ECHGR6.708e-4480.95Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]
HSP70_AJECA2.549e-4383.02Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP68_DROME2.549e-4377.36Heat shock protein 68 OS=Drosophila melanogaster G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006G16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006G16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184946 ID=CN184946; Name=CN184946; organism=Citrus sinensis; type=EST; length=335bp
GAAGGCTACAAGTGTCGGCGAGAAGAACGTCTTGATCTTTGATCTTGGTG
GTGGTACTTTTGATGTGTCTCTTCTTACCATTGAAGAGGGTATCTTTGAA
GTTAAAGCCACAGCTGGTGATACCCATCTTGGTGGTGAGGATTTTGATAA
CAGAATGGTTAACCACTTTGTGCAAGAGTTCAAAAGAAAGCACAAGAAGG
ACATTAGTGGTAACCCCAGAGCTCTAAGGAGGTTGAGAACTTCCTGTGAA
AGAGCTAAGAGGACTCTCTCATCAACCGCCCAGACCACCATTGAGATTGA
CTCGCTTTACGAGGGTATTGACTTCTACTCCCCCA
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