DC887582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887582 vs. ExPASy Swiss-Prot
Match: RS8_MOUSE (40S ribosomal protein S8 OS=Mus musculus GN=Rps8 PE=1 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.517e-34 Identity = 71/139 (51.08%), Postives = 95/139 (68.35%), Query Frame = -2 Query: 213 TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQ 629 TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY HY + +GR S + +K ++R+K+ + +EEQF G+LLACI+SRPGQCGRADGY+LEGKELEFY++K++ Sbjct: 73 TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKR--------SKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIK 203
BLAST of DC887582 vs. ExPASy Swiss-Prot
Match: RS8_MACFA (40S ribosomal protein S8 OS=Macaca fascicularis GN=RPS8 PE=2 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 1.517e-34 Identity = 71/139 (51.08%), Postives = 95/139 (68.35%), Query Frame = -2 Query: 213 TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQ 629 TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY HY + +GR S + +K ++R+K+ + +EEQF G+LLACI+SRPGQCGRADGY+LEGKELEFY++K++ Sbjct: 73 TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKR--------SKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIK 203
BLAST of DC887582 vs. ExPASy Swiss-Prot
Match: RS8_HUMAN (40S ribosomal protein S8 OS=Homo sapiens GN=RPS8 PE=1 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.517e-34 Identity = 71/139 (51.08%), Postives = 95/139 (68.35%), Query Frame = -2 Query: 213 TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQ 629 TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY HY + +GR S + +K ++R+K+ + +EEQF G+LLACI+SRPGQCGRADGY+LEGKELEFY++K++ Sbjct: 73 TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKR--------SKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIK 203
BLAST of DC887582 vs. ExPASy Swiss-Prot
Match: RS8_BOVIN (40S ribosomal protein S8 OS=Bos taurus GN=RPS8 PE=2 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 1.517e-34 Identity = 71/139 (51.08%), Postives = 95/139 (68.35%), Query Frame = -2 Query: 213 TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQ 629 TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY HY + +GR S + +K ++R+K+ + +EEQF G+LLACI+SRPGQCGRADGY+LEGKELEFY++K++ Sbjct: 73 TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKR--------SKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIK 203
BLAST of DC887582 vs. ExPASy Swiss-Prot
Match: RS8_DROME (40S ribosomal protein S8 OS=Drosophila melanogaster GN=RpS8 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.981e-34 Identity = 75/138 (54.35%), Postives = 95/138 (68.84%), Query Frame = -2 Query: 213 RKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQ 626 RKTRI DVVYNASNNELVRT+TLVK++IV +DA PF+QWY HY + +GR S V++K +RQK ++ +E+QF +GR+LACISSRPGQCGR+DGYILEGKELEFY+KK++ Sbjct: 74 RKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKR------SEKVMKKYLERQKYGKVEQALEDQFTSGRILACISSRPGQCGRSDGYILEGKELEFYLKKIK 205
BLAST of DC887582 vs. ExPASy Swiss-Prot
Match: RS8_SPOFR (40S ribosomal protein S8 OS=Spodoptera frugiperda GN=RpS8 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.379e-34 Identity = 75/139 (53.96%), Postives = 93/139 (66.91%), Query Frame = -2 Query: 213 TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQ 629 TRK+RI+DVVYNASNNELVRT+TLVK+AIV VDA PF+QWY HY + +GR S +K RQ+ ++ +EEQF GRLLAC++SRPGQCGRADGYILEGKELEFY++K++ Sbjct: 73 TRKSRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKKGAKLTEAEDAIINKKR--------SQKTAKKYLARQRLSKVESALEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIK 203
BLAST of DC887582 vs. ExPASy Swiss-Prot
Match: RS8_CAEEL (40S ribosomal protein S8 OS=Caenorhabditis elegans GN=rps-8 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.570e-31 Identity = 70/139 (50.36%), Postives = 92/139 (66.19%), Query Frame = -2 Query: 213 TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQ 629 TRKTRI+D +YNA+NNELVRT+TLVK AI+ VDAAPF+QWY HY + + R +S+H ++K +RQK +D + EQF GRLLA ISS PGQ G+A+GYILEGKEL+FY++K++ Sbjct: 73 TRKTRIVDTMYNATNNELVRTKTLVKGAIISVDAAPFRQWYEAHYALPLAR--------KKNAKLSEEDNAILNKKRSHHTMKKYTERQKTAAVDALLIEQFNTGRLLARISSSPGQVGQANGYILEGKELDFYLRKIR 203
BLAST of DC887582 vs. ExPASy Swiss-Prot
Match: RS8_DICDI (40S ribosomal protein S8 OS=Dictyostelium discoideum GN=rps8 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.790e-31 Identity = 72/140 (51.43%), Postives = 88/140 (62.86%), Query Frame = -2 Query: 210 TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQR 629 TRK RIL+VVYNA++N+LVRT TLVK +IVQ+DA P+KQWY HYGV +G+ KS ++ KL R K R LD IE Q G GR A I+SRPGQ G+ DGYILE KELEFY ++LQ+ Sbjct: 77 TRKCRILNVVYNATSNDLVRTNTLVKGSIVQIDATPYKQWYETHYGVVVGK----------KKSAKKDGEAEQVVKKSASLLAKLASRAKGRVLDSAIESQIGEGRFFARITSRPGQVGKCDGYILEAKELEFYQRRLQK 206
BLAST of DC887582 vs. ExPASy Swiss-Prot
Match: RS8_GRIJA (40S ribosomal protein S8 OS=Griffithsia japonica GN=RPS8 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.595e-30 Identity = 73/141 (51.77%), Postives = 88/141 (62.41%), Query Frame = -2 Query: 210 TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVVRKLEKRQKDR-TLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQR 629 T K+RIL+VVYNASNNELVRT T VK I+Q+DA PF+Q+Y HYG+DIG+ S K EKR + R LD I+E F +GRL A I+SRPGQ GRADGY+LEGKELEFY K +Q+ Sbjct: 73 TSKSRILNVVYNASNNELVRTNTFVKGCIIQIDATPFRQYYHNHYGIDIGK----------------KKAGDEESKFSKRHAGKQEKRCQTRLPLDEGIKELFQSGRLYASIASRPGQSGRADGYLLEGKELEFYAKAMQK 197
BLAST of DC887582 vs. ExPASy Swiss-Prot
Match: RS8B_SCHPO (40S ribosomal protein S8-B OS=Schizosaccharomyces pombe GN=rps8b PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.506e-29 Identity = 69/138 (50.00%), Postives = 85/138 (61.59%), Query Frame = -2 Query: 216 TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKL 629 ++KTRI+ V Y+ SNNELVRT TL KSAIVQ+DAAPF+ WY HYG+ +G KS HV RK R D +D +E QF AGRL A +SSRPGQ GR DGYILEG+EL FY++++ Sbjct: 73 SKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILMG--------------SKGKKATATPTPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPGQSGRCDGYILEGEELHFYLRRM 196 The following BLAST results are available for this feature:
BLAST of DC887582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887582 ID=DC887582; Name=DC887582; organism=Citrus sinensis; type=EST; length=630bpback to top |