DC887582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887582 vs. ExPASy Swiss-Prot
Match: RS8A_SCHPO (40S ribosomal protein S8-A OS=Schizosaccharomyces pombe GN=rps8a PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.506e-29 Identity = 69/138 (50.00%), Postives = 85/138 (61.59%), Query Frame = -2 Query: 216 TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKL 629 ++KTRI+ V Y+ SNNELVRT TL KSAIVQ+DAAPF+ WY HYG+ +G KS HV RK R D +D +E QF AGRL A +SSRPGQ GR DGYILEG+EL FY++++ Sbjct: 73 SKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILMG--------------SKGKKATSTPNPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPGQSGRCDGYILEGEELHFYLRRM 196
BLAST of DC887582 vs. ExPASy Swiss-Prot
Match: RS8_YEAST (40S ribosomal protein S8 OS=Saccharomyces cerevisiae GN=RPS8A PE=1 SV=3) HSP 1 Score: 126.716 bits (317), Expect = 9.523e-29 Identity = 67/138 (48.55%), Postives = 84/138 (60.87%), Query Frame = -2 Query: 216 TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKL 629 ++KTRI VVY+ SNNELVRT TL K+AIVQ+DA PF+QW+ HYG +G+ KS + RK R ++ +E QF AGRL ACISSRPGQ GR DGYILEG+EL FY+++L Sbjct: 73 SKKTRIAGVVYHPSNNELVRTNTLTKAAIVQIDATPFRQWFEAHYGQTLGK--------------KKNVKEEETVAKSKNAERKWAARAASAKIESSVESQFSAGRLYACISSRPGQSGRCDGYILEGEELAFYLRRL 196
BLAST of DC887582 vs. ExPASy Swiss-Prot
Match: RS8_THEPA (40S ribosomal protein S8 OS=Theileria parva GN=RPS8 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 9.523e-29 Identity = 66/141 (46.81%), Postives = 87/141 (61.70%), Query Frame = -2 Query: 210 TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVVRKLEKRQKDRTLDPH-IEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQR 629 TRKTR++DVVYNAS+NELVRT+TLVK+AIV VD PFK W+ HYG+++G+ + +K L P + +QF +GRLLACISSRPGQCGR DGY+LEG+EL FY +++ + Sbjct: 73 TRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLELGKSSEDP-----------------------------QASEKVAALVPRTLLDQFSSGRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDK 184
BLAST of DC887582 vs. ExPASy Swiss-Prot
Match: RS8_THEAN (40S ribosomal protein S8 OS=Theileria annulata GN=RPS8 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.061e-28 Identity = 67/140 (47.86%), Postives = 84/140 (60.00%), Query Frame = -2 Query: 210 TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQR 629 TRKTR++DVVYNAS+NELVRT+TLVK+AIV VD PFK W+ HYGV++ S V + K + EQF +GRLLACISSRPGQCGR DGY+LEG+EL FY +++ + Sbjct: 73 TRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGVEL-----------------------EDPQASEKVAGLVPKT---------LLEQFSSGRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDK 180
BLAST of DC887582 vs. ExPASy Swiss-Prot
Match: RS8_LEIMA (40S ribosomal protein S8 OS=Leishmania major GN=RPS8 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.986e-26 Identity = 62/143 (43.36%), Postives = 89/143 (62.24%), Query Frame = -2 Query: 210 KTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDI-----GRXXXXXXXXXXXXXXXXXXXXXXXXXKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQR 623 + R+LDVVYNA++NELVRT+TLVK+ IV VDAAPFK+WY +HYG+D+ S + R+ +R+++ ++ I +Q GR+LA I+SRPGQ GRADG +LEG EL+FY+K+L++ Sbjct: 75 RVRLLDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAAADKYDVNKASPKLQREWTRRRRNHRVEKAIADQLREGRVLARITSRPGQSGRADGILLEGAELQFYLKRLEK 217 The following BLAST results are available for this feature:
BLAST of DC887582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887582 ID=DC887582; Name=DC887582; organism=Citrus sinensis; type=EST; length=630bpback to top |