CN184937
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_MOUSE (RNA-binding protein PNO1 OS=Mus musculus GN=Pno1 PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.688e-57 Identity = 106/187 (56.68%), Postives = 144/187 (77.01%), Query Frame = 3 Query: 165 QLQNESGSLPPKPLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 ++ E +P+F PL ++ G+ + RK+ V +RY+PLK+ WM+I+TPI E + + IR NLK+R VE++T DT D+S L K ADFV AF+LGF V DA+AL+RLD+L++ESFEI DVK L+G+HLSRAIGR++GKGGKTKF IEN T+TRIV+AD +HILGSF NIK+AR ++C+LILG+ Sbjct: 42 RMDTEEARPAKRPVFPPLSGDQLLTGKEETRKIPVPGNRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKDTKDVSALTKAADFVKAFVLGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADVHVHILGSFQNIKMARTAICNLILGN 228
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_HUMAN (RNA-binding protein PNO1 OS=Homo sapiens GN=PNO1 PE=1 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 6.291e-57 Identity = 106/187 (56.68%), Postives = 144/187 (77.01%), Query Frame = 3 Query: 165 QLQNESGSLPPKPLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 ++ E +P+F PL + G+ + RK+ V +RY+PLK+ WM+I+TPI E + + IR NLK+R VE++T +T D+S L K ADFV AF+LGF V DA+AL+RLD+L++ESFEI DVK L+G+HLSRAIGR++GKGGKTKF IEN T+TRIV+AD K+HILGSF NIK+AR ++C+LILG+ Sbjct: 46 RMDTEEARPAKRPVFPPLCGDGLLSGKEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGN 232
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_COCIM (Pre-rRNA-processing protein PNO1 OS=Coccidioides immitis GN=PNO1 PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.217e-57 Identity = 110/176 (62.50%), Postives = 138/176 (78.41%), Query Frame = 3 Query: 198 KPLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 +PLF P+ A + R++ RKV V PHR SPLK W +IY P+ E +K+ +RMN+K++ VEL+T +T D LQK DF+ AF LGFDV DAIALLRLD+LYIE+FEIKDVK L GEHL RAIGR++GK GKTKFAIENA++TR+V+AD KIHILG F NI+IAR+++ SLILGS Sbjct: 61 RPLFTPITATD-GAYRIENRKVPVPPHRMSPLKAAWPKIYPPLVEHLKLQVRMNIKSKAVELRTSKNTTDTGALQKGEDFIKAFTLGFDVDDAIALLRLDDLYIETFEIKDVKPLNGEHLGRAIGRIAGKDGKTKFAIENASRTRVVLADQKIHILGGFRNIRIAREAIVSLILGS 235
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_BOVIN (RNA-binding protein PNO1 OS=Bos taurus GN=PNO1 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.402e-56 Identity = 105/186 (56.45%), Postives = 142/186 (76.34%), Query Frame = 3 Query: 168 LQNESGSLPPKPLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 + E +P+F PL G+ + RK+ V +RY+PLK+ W++I+TPI E + + IR NLK+R VE++T +T D+S L K ADFV AF+LGF V DA+AL+RLD+L++ESFEI DVK L+G+HLSRAIGR++GKGGKTKF IEN T+TRIV+AD K+HILGSF NIK+AR ++C+LILG+ Sbjct: 47 MDTEEARPAKRPVFPPLSGDGFLSGKEETRKIPVPANRYTPLKENWLKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGN 232
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_SCHPO (Pre-rRNA-processing protein pno1 OS=Schizosaccharomyces pombe GN=rbp28 PE=1 SV=2) HSP 1 Score: 217.238 bits (552), Expect = 6.956e-56 Identity = 107/177 (60.45%), Postives = 138/177 (77.97%), Query Frame = 3 Query: 201 PLFGPLK--AHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 P F P K A + G + Q R+V + PHR +PL+ +W ++Y P+ E + + +RMN K+R VEL+ T D LQK DFV AF LGFD+ DAIALLRLD+LYI++FEIKDVKTL+G+HLSRAIGR++G+GGKTKFAIENA++TRIV+ADSKIHILG F NI+IA+D++ SLILGS Sbjct: 45 PKFAPAKTSAEKKRGAKPQMRRVPIPPHRMTPLRNVWPKLYPPLVEHLLLQVRMNTKSRSVELRESKATKDPGALQKGMDFVQAFALGFDIDDAIALLRLDDLYIDTFEIKDVKTLQGDHLSRAIGRIAGQGGKTKFAIENASRTRIVLADSKIHILGGFTNIRIAKDAVVSLILGS 221
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_DEBHA (Pre-rRNA-processing protein PNO1 OS=Debaryomyces hansenii GN=PNO1 PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 6.956e-56 Identity = 115/186 (61.83%), Postives = 143/186 (76.88%), Query Frame = 3 Query: 174 NESGSLPPKPLFGPLKAHEMSGGRVQF--RKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 +ESG KP F A SG +V+ RKV V PHR +PLK W +IY P+ + +K+ +RMNLK + +E+KT +T D LQK ADFV AF LGFDV DAIALLRLD+LYIE+FE+KDVKTL G+HLSRAIGR++GK GKTKFAIENAT+TRIV+ADSKIHILG F +I++AR+++ SLILGS Sbjct: 57 DESG----KPKFS---AASKSGMKVKLESRKVPVPPHRMTPLKNTWTKIYPPLVDHLKLQVRMNLKTKTIEMKTNKNTVDQGALQKGADFVKAFTLGFDVDDAIALLRLDDLYIETFEVKDVKTLNGDHLSRAIGRIAGKDGKTKFAIENATRTRIVLADSKIHILGGFTHIRMAREAVVSLILGS 235
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_PHANO (Pre-rRNA-processing protein PNO1 OS=Phaeosphaeria nodorum GN=PNO1 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.643e-55 Identity = 110/185 (59.46%), Postives = 140/185 (75.68%), Query Frame = 3 Query: 168 LQNESGSLPPKPLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILG 722 + +ESG +P F P K+ ++ Q RKV + PHR +PLK W +IY P+ E +K+ +RMN+K + VEL+T T D LQK DFV AF LGFDV DAIALLRLD+LYIE+FEIKDVKTL+GEH+ RAIGR++GK GKTKFAIENA++TR+V+ADSKIHILG F NI +AR+++ SLILG Sbjct: 62 MTDESG----RPKFAPAKSIPLAFRHEQ-RKVPIPPHRMTPLKTAWPKIYPPLVEHLKLQVRMNIKTKSVELRTSKSTTDTGALQKGEDFVKAFTLGFDVDDAIALLRLDDLYIETFEIKDVKTLQGEHMGRAIGRIAGKDGKTKFAIENASRTRVVLADSKIHILGGFKNIHVAREAIVSLILG 241
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_CANGA (Pre-rRNA-processing protein PNO1 OS=Candida glabrata GN=PNO1 PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.509e-55 Identity = 111/185 (60.00%), Postives = 142/185 (76.76%), Query Frame = 3 Query: 174 NESGSLPPKPLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRAD-TPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 +ESG KP FG K + +++ RKV V PHR +PL+ W +IY P+ + +K+ +RMNLK R VEL+T T D LQK ADF+ AF LGFD+ D+IALLRLD+LYIE+FE+KDVKTL G+HLSRAIGR++GK GKTKFAIENAT+TRIV+ADSKIHILG F +I++AR+++ SLILGS Sbjct: 61 DESG----KPRFGAAKDQATTKVKLESRKVPVPPHRMTPLRNSWNKIYPPLVDHLKLQVRMNLKTRTVELRTHPKHTTDPGALQKGADFIKAFTLGFDLDDSIALLRLDDLYIETFEVKDVKTLTGDHLSRAIGRIAGKDGKTKFAIENATRTRIVLADSKIHILGGFTHIRMAREAVVSLILGS 241
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_KLULA (Pre-rRNA-processing protein PNO1 OS=Kluyveromyces lactis GN=PNO1 PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.004e-54 Identity = 108/177 (61.02%), Postives = 139/177 (78.53%), Query Frame = 3 Query: 198 KPLFGPLKAHEMSGGRVQFRKVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRAD-TPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 KP F + + +++ RKV+V PHR +PLK W +IY P+ + +K+ +RMNLK + VEL+T T D LQK ADF+ AF LGFD+ D+IALLRLD+LYIE+FEIKDVKTL+G+HLSRAIGR++GK GKTKFAIENAT+TRIV+ADSKIHILG F +I++AR+S+ SLILGS Sbjct: 78 KPRFTSAASSAQTKVKLESRKVSVPPHRMTPLKNNWSKIYPPLVDHLKLQVRMNLKTKSVELRTHPKHTTDPGALQKGADFIKAFTLGFDLDDSIALLRLDDLYIETFEIKDVKTLQGDHLSRAIGRIAGKDGKTKFAIENATRTRIVLADSKIHILGGFTHIRMARESVVSLILGS 254
BLAST of CN184937 vs. ExPASy Swiss-Prot
Match: PNO1_YARLI (Pre-rRNA-processing protein PNO1 OS=Yarrowia lipolytica GN=PNO1 PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.312e-54 Identity = 102/156 (65.38%), Postives = 132/156 (84.62%), Query Frame = 3 Query: 258 KVNVTPHRYSPLKKIWMEIYTPIYEQMKIDIRMNLKARRVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRLDELYIESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADSKIHILGSFANIKIARDSLCSLILGS 725 KV + PHR +PLK WM+IY P+ EQ+K+ +RMN + +++EL+T ++T D S LQK DFV AF LGFDV DA+A++RLDELY+E+FEIKDVKTL+G+HL RAIGR++GK GKTKFAIENA++TR+V+ADSKIHILG F NIKIAR+++ SLILGS Sbjct: 83 KVPIPPHRMAPLKNEWMKIYPPLVEQLKLQVRMNPRKKQLELRTCSNTVDNSALQKGTDFVRAFTLGFDVDDAMAIIRLDELYVETFEIKDVKTLQGDHLGRAIGRIAGKDGKTKFAIENASRTRVVLADSKIHILGGFTNIKIAREAIVSLILGS 238 The following BLAST results are available for this feature:
BLAST of CN184937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184937 ID=CN184937; Name=CN184937; organism=Citrus sinensis; type=EST; length=727bpback to top |