CN184935
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD2_HUMAN (Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 8.742e-14 Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 1 Query: 628 PLLTGGK---LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNE 849 P GG+ L+ YQL+G+ WL W + ILAD+MGLGKTIQTI+FL++L + L+GP+L++ PLSTL++W E Sbjct: 474 PAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQRE 551
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD4_MOUSE (Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.142e-13 Identity = 39/72 (54.17%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 637 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVIAPLSTLSNWVNE 849 TGG L YQ++G+ WL W G + ILAD+MGLGKT+QT FL L G GP+LV APLST+ NW E Sbjct: 715 TGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWERE 786
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD4_HUMAN (Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.142e-13 Identity = 39/72 (54.17%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 637 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVIAPLSTLSNWVNE 849 TGG L YQ++G+ WL W G + ILAD+MGLGKT+QT FL L G GP+LV APLST+ NW E Sbjct: 722 TGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWERE 793
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: HEPF1_PLAF7 (Probable ATP-dependent helicase PF08_0048 OS=Plasmodium falciparum (isolate 3D7) GN=PF08_0048 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.491e-13 Identity = 38/87 (43.68%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 601 VDKEQRELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPYLVIAPLSTLSNWVNEISR 858 +D++ +P + L+ YQ G+ WL+ L++N +NGILAD+MGLGKT+Q I+ L++L + GP+LVI P S L NW E+ R Sbjct: 646 MDEKHLTKIPPIIKATLRDYQHAGLHWLLYLYKNNINGILADEMGLGKTLQCISLLSYLAYYFNIWGPHLVIVPTSILINWEIELKR 732
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD3_DROME (Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila melanogaster GN=Chd3 PE=2 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 2.544e-13 Identity = 38/72 (52.78%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 640 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEI 852 G KL +Q++GV WL W G+ ILAD+MGLGKTIQT+ FL L K GP+L+ PLSTL+NW E+ Sbjct: 264 GLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLTNWEREL 335
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD1L_HUMAN (Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens GN=CHD1L PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.401e-13 Identity = 42/78 (53.85%), Postives = 51/78 (65.38%), Query Frame = 1 Query: 634 LTGGKLKSYQLKGVKWLISLW--QNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPYLVIAPLSTLSNWVNEISR 858 LTG L+SYQL+GV WL + QNG IL D+MGLGKT QTIA +L G GP+L++ PLS LSNW E+ R Sbjct: 41 LTGIHLRSYQLEGVNWLAQRFHCQNGC--ILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMQR 116
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD1L_DANRE (Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio GN=chd1l PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.262e-12 Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 1 Query: 649 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPYLVIAPLSTLSNWVNEISR 858 L+ YQL GVKWL +N IL D+MGLGKT QTI+ LA+ +G+ ++GP+LV+ PL+ L NW E+ R Sbjct: 35 LRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLVLCPLAVLENWRQELER 105
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: EP400_HUMAN (E1A-binding protein p400 OS=Homo sapiens GN=EP400 PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 1.649e-12 Identity = 40/88 (45.45%), Postives = 51/88 (57.95%), Query Frame = 1 Query: 598 RVDKEQRELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPYLVIAPLSTLSNWVNEISR 858 RV + P L G L+ YQ G+ WL L++ LNGILAD+ GLGKT+Q IAF AHL N G GP+LV+ + W E+ R Sbjct: 1074 RVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKR 1161
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: EP400_MOUSE (E1A-binding protein p400 OS=Mus musculus GN=Ep400 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.153e-12 Identity = 40/88 (45.45%), Postives = 51/88 (57.95%), Query Frame = 1 Query: 598 RVDKEQRELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPYLVIAPLSTLSNWVNEISR 858 RV + P L G L+ YQ G+ WL L++ LNGILAD+ GLGKT+Q IAF AHL N G GP+LV+ + W E+ R Sbjct: 1073 RVTTAVKFSAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVMRSCNILKWELELKR 1160
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD1L_BOVIN (Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus GN=CHD1L PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.153e-12 Identity = 41/78 (52.56%), Postives = 50/78 (64.10%), Query Frame = 1 Query: 634 LTGGKLKSYQLKGVKWLISLW--QNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPYLVIAPLSTLSNWVNEISR 858 LTG L+ YQL+GV WL + QNG IL D+MGLGKT QTIA +L G GP+L++ PLS LSNW E+ R Sbjct: 43 LTGIHLRPYQLQGVNWLAQCFHCQNGC--ILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMER 118 The following BLAST results are available for this feature:
BLAST of CN184935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184935 ID=CN184935; Name=CN184935; organism=Citrus sinensis; type=EST; length=858bpback to top |