CN184935
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD1_DROME (Chromodomain-helicase-DNA-binding protein 1 OS=Drosophila melanogaster GN=Chd1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12 Identity = 37/74 (50.00%), Postives = 50/74 (67.57%), Query Frame = 1 Query: 631 LLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNE 849 L +G L+ YQ+ G+ WL+ W + ILAD+MGLGKTIQTI FL L K + L+GP+L + PLST++ W E Sbjct: 522 LSSGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLSTMTAWQRE 595
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: YWQA_BACSU (Uncharacterized ATP-dependent helicase ywqA OS=Bacillus subtilis GN=ywqA PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.797e-12 Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 1 Query: 643 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH-GPYLVIAPLSTLSNWVNEI 852 G L+ YQ G+ WL+ L ++G LAD MGLGKTIQ IA+ H+K +G P+L+IAP S L NW E+ Sbjct: 448 GTLRPYQKYGMNWLLFLRESGFGACLADDMGLGKTIQMIAYFLHVKESGRQKTPHLIIAPTSVLGNWQREL 518
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: PKL_ARATH (CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana GN=PKL PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12 Identity = 42/84 (50.00%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 604 DKEQRELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNEIS 855 D +Q + P G L YQL+G+ +L W + ILAD+MGLGKTIQ+IA LA L L P+LVIAPLSTL NW E + Sbjct: 258 DFQQFDHTPEFLKGLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEENLI-PHLVIAPLSTLRNWEREFA 340
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: RAD26_YEAST (DNA repair and recombination protein RAD26 OS=Saccharomyces cerevisiae GN=RAD26 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.927e-11 Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 1 Query: 649 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVIAPLSTLSNWVNE 849 L +YQ V+WL L+Q GI+ D+MGLGKTIQ IAF+A L +G L GP L++ P + + W NE Sbjct: 297 LFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGLLTGPVLIVCPATVMKQWCNE 364
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: MIT1_SCHPO (Chromatin remodeling factor mit1 OS=Schizosaccharomyces pombe GN=mit1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.047e-11 Identity = 34/75 (45.33%), Postives = 46/75 (61.33%), Query Frame = 1 Query: 634 LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNEISR 858 + GG L YQLKG+ WL W ILAD+MGLGKT+Q I+F++ L P LVI P +T++NW E+ + Sbjct: 551 IKGGTLMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVISFISVLFYRHKCFPVLVIVPHATVANWERELKK 625 The following BLAST results are available for this feature:
BLAST of CN184935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184935 ID=CN184935; Name=CN184935; organism=Citrus sinensis; type=EST; length=858bpback to top |