CN184935
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_DROME (Putative DNA helicase Ino80 OS=Drosophila melanogaster GN=Ino80 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.066e-19 Identity = 68/210 (32.38%), Postives = 104/210 (49.52%), Query Frame = 1 Query: 298 EQENVSKNEAHLNDL--QFNKLDELLTQTQMYAEFLLEKM----EDITVNGVEQESEPVXXXXXXXXXXXAAPQCNTRKAKRAVAAMLTRSKXXXXXXXXXXXXXXRVDKEQRELV----------------PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPYLVIAPLSTLSNWVNEISR 858 E E K + L ++ Q KL+ L+TQT++YA F+ +K+ E+ + + Q E A + + A AAM +++ +E V P + G LK YQ+KG+ WL +++ G++GILAD+MGLGKT+Q+IAFL H+ + G+ GP+LVI+P STL NW E+SR Sbjct: 397 EAEEQRKQDVELIEVKRQQRKLNFLITQTELYAHFMSKKLGQGSEEDQLRILSQLDEETNARLAAQDDYDAG-EMKLLAQENAEAAMQRDLDKTRAFDVFAKKKEKEEEEQAQESVEDIKPEPRPEMKDLPQPKMFKGTLKGYQIKGMTWLANIYDQGISGILADEMGLGKTVQSIAFLCHIAEHYGVWGPFLVISPASTLHNWQQEMSR 605
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: ISW2_ORYSJ (Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa subsp. japonica GN=Os01g0367900 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.392e-19 Identity = 44/78 (56.41%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 P GK++ YQL G+ WLI L++NG+NGILAD+MGLGKT+QTI+ L +L + G+ GP++V+AP STL NW+ EI R Sbjct: 224 PSCIKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWIKEIQR 301
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_KLULA (Putative DNA helicase INO80 OS=Kluyveromyces lactis GN=INO80 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.375e-19 Identity = 45/78 (57.69%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPYLVIAPLSTLSNWVNEISR 858 P + LK YQLKG+ WL +L+ G+NGILAD+MGLGKT+Q+I+ LAHL + GP++V+ P STL NWVNEISR Sbjct: 739 PKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISR 816
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_SCLS1 (Putative DNA helicase INO80 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=INO80 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.102e-19 Identity = 46/87 (52.87%), Postives = 67/87 (77.01%), Query Frame = 1 Query: 601 VDKEQRELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 VD EQ P + +LK YQLKG+ WL++L++ G+NGILAD+MGLGKT+Q+I+ +A+L + +G+ GP+LV+AP STL NW EI++ Sbjct: 829 VDIEQ----PKMLQAQLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAYLAEKHGIWGPFLVVAPASTLHNWQQEITK 911
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: BRM_DROME (ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 4.052e-19 Identity = 45/81 (55.56%), Postives = 59/81 (72.84%), Query Frame = 1 Query: 619 ELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLSTLSNWVNEISR 858 E ++ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTI+ + +L + GPYL+I PLSTL NWV E + Sbjct: 763 EQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEK 843
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_EMENI (Putative DNA helicase ino80 OS=Emericella nidulans GN=ino80 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.291e-19 Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 P + KLK YQLKG+ WL++L++ G+NGILAD+MGLGKTIQ+I+ +A+L + + + GP+LVIAP STL NW EI++ Sbjct: 791 PTMLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPASTLHNWQQEITK 868
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_ASPOR (Putative DNA helicase ino80 OS=Aspergillus oryzae GN=ino80 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.291e-19 Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 P + KLK YQLKG+ WL++L++ G+NGILAD+MGLGKTIQ+I+ +A+L + + + GP+LVIAP STL NW EI++ Sbjct: 626 PTMLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPASTLHNWQQEITK 703
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_NEOFI (Putative DNA helicase ino80 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ino80 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.911e-19 Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 P + KLK YQLKG+ WL++L++ G+NGILAD+MGLGKTIQ+I+ +A+L + + + GP+LVIAP STL NW EI++ Sbjct: 826 PKMLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPASTLHNWQQEITK 903
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_ASPTN (Putative DNA helicase ino80 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ino80 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.911e-19 Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 P + KLK YQLKG+ WL++L++ G+NGILAD+MGLGKTIQ+I+ +A+L + + + GP+LVIAP STL NW EI++ Sbjct: 811 PSMLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPASTLHNWQQEITK 888
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_ASPFU (Putative DNA helicase ino80 OS=Aspergillus fumigatus GN=ino80 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.911e-19 Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 P + KLK YQLKG+ WL++L++ G+NGILAD+MGLGKTIQ+I+ +A+L + + + GP+LVIAP STL NW EI++ Sbjct: 826 PKMLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPASTLHNWQQEITK 903 The following BLAST results are available for this feature:
BLAST of CN184935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184935 ID=CN184935; Name=CN184935; organism=Citrus sinensis; type=EST; length=858bpback to top |