CN184935
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_SCHPO (Putative DNA helicase ino80 OS=Schizosaccharomyces pombe GN=ino80 PE=1 SV=4) HSP 1 Score: 94.3597 bits (233), Expect = 9.026e-19 Identity = 65/198 (32.83%), Postives = 100/198 (50.51%), Query Frame = 1 Query: 313 SKNEAHLNDL--QFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQESEPVXXXXXXXXXXXAAPQCNTRKAKRAV------AAMLTRSKXXXXXXXXXXXXXXRVDKEQRELV-------PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 +K E L + Q KLD L+TQT++Y+ F+ KM+ + V + A+ AV + + ++ ++ + LV P + KLK YQLKG+ WL +L++ G+NGILAD+MGLGKT+Q+I+ +A+L + + + GP+LVIAP STL NW EI+R Sbjct: 715 AKKEEELRESRRQARKLDFLITQTELYSHFVGRKMDREQDLPSATNTASVSEINFDSDEEEDIRRLAVESAQEAVQKAREHSQLFDANRQQSPNNSSSDMNEGEMNFQNPTLVNAFEVKQPKMLMCKLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVMAYLAETHNIWGPFLVIAPASTLHNWQQEITR 912
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_ASPNC (Putative DNA helicase ino80 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ino80 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.026e-19 Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 P + KLK YQLKG+ WL++L++ G+NGILAD+MGLGKTIQ+I+ +A+L + + + GP+LVIAP STL NW EI++ Sbjct: 816 PNMLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPASTLHNWQQEITK 893
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_ASPCL (Putative DNA helicase ino80 OS=Aspergillus clavatus GN=ino80 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.026e-19 Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 P + KLK YQLKG+ WL++L++ G+NGILAD+MGLGKTIQ+I+ +A+L + + + GP+LVIAP STL NW EI++ Sbjct: 828 PNMLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPASTLHNWQQEITK 905
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: HELLS_MOUSE (Lymphocyte-specific helicase OS=Mus musculus GN=Hells PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 9.026e-19 Identity = 42/74 (56.76%), Postives = 57/74 (77.03%), Query Frame = 1 Query: 637 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNEISR 858 TGG ++ YQ++G++WL LW+NG+NGILAD+MGLGKT+Q IA +A + G+ GP+LV PLSTL NW+ E R Sbjct: 202 TGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRGVPGPFLVCGPLSTLPNWMAEFKR 275
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: HELLS_HUMAN (Lymphoid-specific helicase OS=Homo sapiens GN=HELLS PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.026e-19 Identity = 42/74 (56.76%), Postives = 57/74 (77.03%), Query Frame = 1 Query: 637 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNEISR 858 TGG ++ YQ++G++WL LW+NG+NGILAD+MGLGKT+Q IA +A + G+ GP+LV PLSTL NW+ E R Sbjct: 219 TGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRGVPGPFLVCGPLSTLPNWMAEFKR 292
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: SMCA5_HUMAN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Homo sapiens GN=SMARCA5 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.179e-18 Identity = 41/73 (56.16%), Postives = 59/73 (80.82%), Query Frame = 1 Query: 643 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLSTLSNWVNEISR 858 GKL+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP++V+ P STL NW++E R Sbjct: 178 GKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKR 250
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: ISWI_DROME (Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila melanogaster GN=Iswi PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.179e-18 Identity = 41/76 (53.95%), Postives = 59/76 (77.63%), Query Frame = 1 Query: 634 LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLSTLSNWVNEISR 858 + G+++ YQ++G+ W+ISL++NG+NGILAD+MGLGKT+QTI+ L +LK GP++VI P STL NWVNE + Sbjct: 123 IKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWVNEFKK 198
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_GIBZE (Putative DNA helicase INO80 OS=Gibberella zeae GN=INO80 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.179e-18 Identity = 42/78 (53.85%), Postives = 62/78 (79.49%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 P L +LK YQLKG+ WL++L++ G+NGILAD+MGLGKT+Q+I+ +A+L + + + GP+LV+AP STL NW EI++ Sbjct: 1038 PKLINAQLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAYLAEKHDIWGPFLVVAPASTLHNWQQEIAK 1115
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_CRYNE (Putative DNA helicase INO80 OS=Cryptococcus neoformans GN=INO80 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.179e-18 Identity = 68/217 (31.34%), Postives = 106/217 (48.85%), Query Frame = 1 Query: 313 SKNEAHLNDLQFNKLDELLTQTQMYAEFLLEKM-------------EDITVNGVEQ-----ESEPVXXXXXXXXXXXAAPQCNTRKAKRAVAAMLTRSKXXXXXXXXXXXXXXRVDKEQRELV----------------PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 ++ EA Q KL+ LLTQT++Y+ F+ +K+ E+ G+E+ + EP+ + R A+ A+ A +++ D + + P + +LK YQLKG+ WL +L++ G+NGILAD+MGLGKTIQ+I+ LA+L + + L GP+LVIAP STL NW E++R Sbjct: 725 AEEEARETKRQSRKLNFLLTQTELYSHFIGKKIKTKEAEAAEGMDVEEEEKRGMEEIAIGEDGEPLPDLDYDEDDEENLRKHAARGAQAAIQAARDKARAFDDSIVGRGAPLPGDDTMDGDELNFQNPSLGENSVTITQPKMLMAQLKEYQLKGLTWLGNLYEQGINGILADEMGLGKTIQSISLLAYLAEHHNLWGPFLVIAPASTLHNWQQELAR 941
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_MAGGR (Putative DNA helicase INO80 OS=Magnaporthe grisea GN=INO80 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.540e-18 Identity = 44/78 (56.41%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 P L LK YQLKG+ WL++L++ G+NGILAD+MGLGKTIQ+I+ +A+L + + + GP+LV+AP STL NW EI R Sbjct: 1071 PKLLTATLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEHHDIWGPFLVVAPASTLHNWEQEIKR 1148 The following BLAST results are available for this feature:
BLAST of CN184935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184935 ID=CN184935; Name=CN184935; organism=Citrus sinensis; type=EST; length=858bpback to top |