CN184935
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: ISW1_YEAST (ISWI chromatin-remodeling complex ATPase ISW1 OS=Saccharomyces cerevisiae GN=ISW1 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 2.011e-18 Identity = 44/78 (56.41%), Postives = 61/78 (78.21%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLSTLSNWVNEISR 858 P G+L+ YQ++GV WL+SL +N + GILAD+MGLGKT+QTI+FL +L+ + GP+LVIAP STL+NW+ EI+R Sbjct: 189 PAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAPKSTLNNWLREINR 266
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_ASHGO (Putative DNA helicase INO80 OS=Ashbya gossypii GN=INO80 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.011e-18 Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 P + LK YQLKG+ WL +L+ G+NGILAD+MGLGKT+Q+I+ LAHL + + GP++V+ P STL NWVNEI + Sbjct: 648 PKILACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAERYNIWGPFIVVTPASTLHNWVNEIQK 725
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: SMCA5_MOUSE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Mus musculus GN=Smarca5 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.626e-18 Identity = 40/73 (54.79%), Postives = 59/73 (80.82%), Query Frame = 1 Query: 643 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLSTLSNWVNEISR 858 GKL+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP++V+ P STL NW++E + Sbjct: 177 GKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKK 249
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD8_RAT (Chromodomain-helicase-DNA-binding protein 8 OS=Rattus norvegicus GN=Chd8 PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 4.479e-18 Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 1 Query: 646 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNEIS 855 +L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+IAFL + G+HGP+LVIAPLST++NW E + Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFN 879
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD8_MOUSE (Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus GN=Chd8 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.479e-18 Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 1 Query: 646 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNEIS 855 +L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+IAFL + G+HGP+LVIAPLST++NW E + Sbjct: 812 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFN 881
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD8_HUMAN (Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8 PE=1 SV=4) HSP 1 Score: 92.0485 bits (227), Expect = 4.479e-18 Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 1 Query: 646 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNEIS 855 +L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+IAFL + G+HGP+LVIAPLST++NW E + Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFN 879
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_PHANO (Putative DNA helicase INO80 OS=Phaeosphaeria nodorum GN=INO80 PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 5.850e-18 Identity = 43/78 (55.13%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 P L LK YQLKG+ WL++L++ G+NGILAD+MGLGKT+Q+I+ +A+L + + GP+LVIAP STL NW EI++ Sbjct: 814 PKLLNCTLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAYLAERYNIWGPFLVIAPASTLHNWQQEIAK 891
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_NEUCR (Putative DNA helicase ino-80 OS=Neurospora crassa GN=ino-80 PE=3 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 5.850e-18 Identity = 42/78 (53.85%), Postives = 61/78 (78.21%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 P L +LK YQLKG+ WL++L++ G+NGILAD+MGLGKT+Q+I+ +A+L + + GP+LV+AP STL NW EI++ Sbjct: 1111 PKLLNCQLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAYLAEKYDIWGPFLVVAPASTLHNWQQEITK 1188
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_USTMA (Putative DNA helicase INO80 OS=Ustilago maydis GN=INO80 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.641e-18 Identity = 43/78 (55.13%), Postives = 61/78 (78.21%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 P + +LK YQLKG+ WL +L++ G+NGILAD+MGLGKT+Q+I+ +A+L + + + GP+LVIAP STL NW EIS+ Sbjct: 991 PKMLTCQLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISLMAYLAEVHDIWGPFLVIAPASTLHNWQQEISK 1068
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: FFT2_SCHPO (Uncharacterized ATP-dependent helicase fft2 OS=Schizosaccharomyces pombe GN=fft2 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.303e-17 Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = 1 Query: 646 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNEISR 858 +LKSYQL GV WL L+Q L+GILAD+MGLGKT Q +AF A L G HGP+LV+ P STL NW+ E++R Sbjct: 549 QLKSYQLVGVNWLHLLYQQKLSGILADEMGLGKTCQVVAFFALLLEQGHHGPHLVVVPSSTLENWLRELAR 619 The following BLAST results are available for this feature:
BLAST of CN184935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184935 ID=CN184935; Name=CN184935; organism=Citrus sinensis; type=EST; length=858bpback to top |