CN184935
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD7_CHICK (Chromodomain-helicase-DNA-binding protein 7 OS=Gallus gallus GN=CHD7 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.303e-17 Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 1 Query: 646 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNE 849 KL+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+HGP+LVIAPLST+ NW E Sbjct: 968 KLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWERE 1035
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: STH1_YEAST (Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae GN=STH1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.702e-17 Identity = 45/86 (52.33%), Postives = 64/86 (74.42%), Query Frame = 1 Query: 607 KEQRELVP-LLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 KE+ + P +L GG LK YQL+G++W++SL+ N LNGILAD+MGLGKTIQ+I+ + +L + GP+LVI PLST++NW E + Sbjct: 455 KEKIDKQPSILVGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEK 540
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD7_MOUSE (Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.702e-17 Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 1 Query: 646 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNE 849 KL+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+HGP+LVIAPLST+ NW E Sbjct: 957 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWERE 1024
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD7_HUMAN (Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7 PE=1 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 1.702e-17 Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 1 Query: 646 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNE 849 KL+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+HGP+LVIAPLST+ NW E Sbjct: 967 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWERE 1034
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: SWR1_USTMA (Helicase SWR1 OS=Ustilago maydis GN=SWR1 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.223e-17 Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK-GNGLHGPYLVIAPLSTLSNWVNEISR 858 P L G+L+ YQ G +WL SL+ NG+NGILAD+MGLGKTIQTI+ LAHL G+ GP+LV+AP S + NW E + Sbjct: 983 PFLLRGQLRPYQQIGFEWLCSLYANGVNGILADEMGLGKTIQTISLLAHLACDKGVWGPHLVVAPTSVMLNWEVEFKK 1060
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_DEBHA (Putative DNA helicase INO80 OS=Debaryomyces hansenii GN=INO80 PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 2.223e-17 Identity = 41/71 (57.75%), Postives = 57/71 (80.28%), Query Frame = 1 Query: 649 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 LK YQ+KG+ WL +L++ G+NGILAD+MGLGKT+Q+I+ LA+L + + + GP+LV+ P STL NW EISR Sbjct: 567 LKEYQVKGLNWLANLYEQGINGILADEMGLGKTVQSISVLAYLAETHNIWGPFLVVTPASTLHNWQQEISR 637
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_COCIM (Putative DNA helicase INO80 OS=Coccidioides immitis GN=INO80 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.904e-17 Identity = 41/76 (53.95%), Postives = 60/76 (78.95%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEI 852 P + +LK YQLKG+ WL++L++ G+NGILAD+MGLGKT+Q+I+ +A+L + + + GP+LV+AP STL NW EI Sbjct: 789 PKMLTCQLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAYLAEVHDIWGPFLVVAPSSTLHNWQQEI 864
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD8_XENTR (Chromodomain-helicase-DNA-binding protein 8 OS=Xenopus tropicalis GN=chd8 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.904e-17 Identity = 41/70 (58.57%), Postives = 52/70 (74.29%), Query Frame = 1 Query: 640 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNE 849 G +L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+ GP+LVIAPLST++NW E Sbjct: 752 GNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITFLQEVYNVGIRGPFLVIAPLSTITNWERE 821
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: INO80_LODEL (Putative DNA helicase ino80 OS=Lodderomyces elongisporus GN=INO80 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.792e-17 Identity = 63/219 (28.77%), Postives = 104/219 (47.49%), Query Frame = 1 Query: 298 EQENVSKNEAHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNG--------------------VEQESEPVXXXXXXXXXXXAAPQCNTRKAKRAVAAMLTRSKXXXXXXXXXXXXXXRVDKEQRELVPLLTGG-----------KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 E+E SK ++ KL+ L+TQT++Y+ F+ +K++ + G V+ + + A + + A+ A+A ++K +E P L G LK YQ+KG+ WL +L++ G+NGILAD+MGLGKT+Q+I+ L++L + + + GP+LV+ P STL NW EIS+ Sbjct: 598 EEERESKRQSR-------KLNFLITQTELYSHFIGKKIKTDEIEGTDADPRIKAQEKAHLDKYAGVDAANNDILAIDFDNDDEDALHRAAAQNAQNALANAQNQAKQFDDTEPFKNPDTN--GEEMNFQNPTLLGDLSIEQPKMLKCTLKEYQIKGLNWLANLYEQGINGILADEMGLGKTVQSISVLSYLAETHNIWGPFLVVTPASTLHNWQQEISK 807
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD6_HUMAN (Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6 PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 3.792e-17 Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 1 Query: 646 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNE 849 +L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL+ + G+HGP+L+IAPLST++NW E Sbjct: 460 QLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWERE 527 The following BLAST results are available for this feature:
BLAST of CN184935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184935 ID=CN184935; Name=CN184935; organism=Citrus sinensis; type=EST; length=858bpback to top |