CN184935
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: YFC1_SCHPO (Uncharacterized ATP-dependent helicase C25A8.01c OS=Schizosaccharomyces pombe GN=SPAC25A8.01c PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.081e-15 Identity = 38/71 (53.52%), Postives = 52/71 (73.24%), Query Frame = 1 Query: 646 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNEISR 858 KL+ YQ+ G+ WL L++ L GILAD+MGLGKT QTIAF + L ++GP+LVIAP ST+ NW+ E ++ Sbjct: 386 KLQDYQIIGINWLYLLYELKLAGILADEMGLGKTCQTIAFFSLLMDKNINGPHLVIAPASTMENWLREFAK 456
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: SWR1_ASPFU (Helicase swr1 OS=Aspergillus fumigatus GN=swr1 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.549e-15 Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 625 VPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK-GNGLHGPYLVIAPLSTLSNWVNEISR 858 +P L G L+ YQ G+ WL L+ N +NGILAD+MGLGKTIQTIA LAHL + + GP+LV+ P S + NW E + Sbjct: 822 IPHLLRGTLREYQHYGLDWLAGLYNNHINGILADEMGLGKTIQTIALLAHLAVEHEVWGPHLVVVPTSVILNWEMEFKK 900
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: ISW1_CAEEL (Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis elegans GN=isw-1 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.549e-15 Identity = 37/76 (48.68%), Postives = 53/76 (69.74%), Query Frame = 1 Query: 634 LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLSTLSNWVNEISR 858 + G+++ YQ++G+ WL SL N +NGILAD+MGLGKT+QTI+ + ++K P+LVI P STL NW NE + Sbjct: 127 IENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVPKSTLQNWANEFKK 202
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: FFT1_SCHPO (Uncharacterized ATP-dependent helicase fft1 OS=Schizosaccharomyces pombe GN=fft1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.636e-15 Identity = 38/76 (50.00%), Postives = 53/76 (69.74%), Query Frame = 1 Query: 631 LLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNEISR 858 + +G LKSYQ+ G+ WL +++ L+GILAD+MGLGKT Q I+FLA LK G+ +LV+ P STL NW+ E + Sbjct: 408 IASGITLKSYQIVGLNWLCLMYKAKLSGILADEMGLGKTCQVISFLASLKEKGIQNRHLVVVPSSTLGNWLREFEK 483
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: SWR1_KLULA (Helicase SWR1 OS=Kluyveromyces lactis GN=SWR1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.054e-15 Identity = 44/81 (54.32%), Postives = 54/81 (66.67%), Query Frame = 1 Query: 625 VPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL---KGNGLHGPYLVIAPLSTLSNWVNEISR 858 VP L G L+ YQ +G+ WL SL+ N NGILAD+MGLGKTIQTI+ LA+L K N GP+L++ P S L NW E R Sbjct: 757 VPSLLRGTLRIYQKQGLNWLASLYNNKTNGILADEMGLGKTIQTISLLAYLACEKEN--WGPHLIVVPTSVLLNWEMEFKR 835
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: HRP1_SCHPO (Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe GN=hrp1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.054e-15 Identity = 34/70 (48.57%), Postives = 51/70 (72.86%), Query Frame = 1 Query: 634 LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPYLVIAPLSTLSNW 840 + GG+++ +QL G+ W+ LW NGILAD+MGLGKT+QT+ FL++L + HGP+L++ PLST+ W Sbjct: 385 IKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQHGPFLIVVPLSTVPAW 454
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD5_HUMAN (Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.054e-15 Identity = 42/72 (58.33%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 637 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVIAPLSTLSNWVNE 849 TGG L YQL+G+ WL W G + ILAD+MGLGKT+QTI FL L G GPYLV APLST+ NW E Sbjct: 696 TGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWERE 767
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: SWR1_CANGA (Helicase SWR1 OS=Candida glabrata GN=SWR1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.033e-14 Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 1 Query: 628 PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL---KGNGLHGPYLVIAPLSTLSNWVNEISR 858 P L G L++YQ +G+ WL SL+ N NGILAD+MGLGKTIQTI+ L++L K N GP+L++ P S L NW E R Sbjct: 621 PSLLRGTLRTYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLSYLACEKHN--WGPHLIVVPTSVLLNWEMEFKR 698
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: SWR1_CANAL (Helicase SWR1 OS=Candida albicans GN=SWR1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.033e-14 Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 625 VPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK-GNGLHGPYLVIAPLSTLSNWVNEISR 858 +P L G L+ YQ +G+ WL SL+ N NGILAD+MGLGKTIQTI+ LA+L + GP+L+I P S + NW E + Sbjct: 815 IPSLLRGTLRPYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLAYLACEHHKWGPHLIIVPTSVMLNWEMEFKK 893
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD3_HUMAN (Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3 PE=1 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 1.033e-14 Identity = 42/72 (58.33%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 637 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVIAPLSTLSNWVNE 849 TGG L YQL+G+ WL W G + ILAD+MGLGKTIQTI FL L G GP+LV APLST+ NW E Sbjct: 732 TGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWERE 803 The following BLAST results are available for this feature:
BLAST of CN184935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184935 ID=CN184935; Name=CN184935; organism=Citrus sinensis; type=EST; length=858bpback to top |