CN184935
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: SWR1_YARLI (Helicase SWR1 OS=Yarrowia lipolytica GN=SWR1 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.349e-14 Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 1 Query: 598 RVDKEQRELV--PLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK-GNGLHGPYLVIAPLSTLSNWVNEISR 858 RV E+ V P L G L++YQ G++WL L+ N NGILAD+MGLGKTIQTI+ L++L + + GP+L+I P S + NW E R Sbjct: 890 RVTPERAPAVEPPFLLRGTLRAYQQLGLEWLAGLYNNDTNGILADEMGLGKTIQTISLLSYLACEHHIWGPHLIIVPTSVMLNWEMEFKR 979
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: SWR1_SCHPO (Helicase swr1 OS=Schizosaccharomyces pombe GN=swr1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.761e-14 Identity = 43/81 (53.09%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 625 VPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL---KGNGLHGPYLVIAPLSTLSNWVNEISR 858 VP L G L+ YQ G++WL +L + NGILAD+MGLGKTIQTIA LAHL K N GP+L+I P S + NW E + Sbjct: 439 VPFLFRGTLREYQQYGLEWLTALHDSNTNGILADEMGLGKTIQTIALLAHLACEKEN--WGPHLIIVPTSVMLNWEMEFKK 517
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: DOM_DROME (Helicase domino OS=Drosophila melanogaster GN=dom PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.761e-14 Identity = 40/79 (50.63%), Postives = 52/79 (65.82%), Query Frame = 1 Query: 625 VPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK-GNGLHGPYLVIAPLSTLSNWVNEISR 858 VP L L+ YQ G+ WL+++ + LNGILAD+MGLGKTIQTIA LAHL G GP+L++ P S + NW E + Sbjct: 906 VPFLLKHSLREYQHIGLDWLVTMNERKLNGILADEMGLGKTIQTIALLAHLACAKGNWGPHLIVVPSSVMLNWEMEFKK 984
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD1_MOUSE (Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus GN=Chd1 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.301e-14 Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 1 Query: 607 KEQRELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEI 852 K+Q + G +L+ YQL G+ WL W G + ILAD+MGLGKTIQTI+FL +L + L+GP+L++ PLSTL++W EI Sbjct: 465 KKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREI 547
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD1_HUMAN (Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.301e-14 Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 1 Query: 607 KEQRELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEI 852 K+Q + G +L+ YQL G+ WL W G + ILAD+MGLGKTIQTI+FL +L + L+GP+L++ PLSTL++W EI Sbjct: 467 KKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREI 549
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD1L_MOUSE (Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus GN=Chd1l PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.005e-14 Identity = 44/78 (56.41%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 634 LTGGKLKSYQLKGVKWLISLW--QNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPYLVIAPLSTLSNWVNEISR 858 LTG +L+SYQL+GV WL+ + QNG IL D+MGLGKT QTIA L +L G GP+LV+ PLS LSNW E+ R Sbjct: 35 LTGIRLRSYQLEGVNWLVQCFHCQNGC--ILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLVLCPLSVLSNWKEEMER 110
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHDM_DROME (Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 5.125e-14 Identity = 39/72 (54.17%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 637 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVIAPLSTLSNWVNE 849 TG +L YQ++G+ WL W G++ ILAD+MGLGKTIQT+ FL L G GP+LV PLSTL NW E Sbjct: 726 TGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWERE 797
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD1_CHICK (Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus GN=CHD1 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.125e-14 Identity = 38/70 (54.29%), Postives = 52/70 (74.29%), Query Frame = 1 Query: 646 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEI 852 +L+ YQL G+ WL W G + ILAD+MGLGKTIQTI+FL +L + L+GP+L++ PLSTL++W EI Sbjct: 476 ELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREI 545
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: CHD1_BOMMO (Chromodomain-helicase-DNA-binding protein 1 OS=Bombyx mori GN=CHD1 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.125e-14 Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 607 KEQRELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISR 858 KEQ E V + L+ YQ+ G+ WLI W + ILAD+MGLGKTIQTI FL +L K L+GP+L + PLST++ W E + Sbjct: 191 KEQPEYVGKDSSYHLRDYQMDGLNWLIHSWCKDNSVILADEMGLGKTIQTICFLYYLFKSQHLYGPFLCVVPLSTMTAWQREFQQ 275
BLAST of CN184935 vs. ExPASy Swiss-Prot
Match: FUN30_YEAST (Uncharacterized ATP-dependent helicase FUN30 OS=Saccharomyces cerevisiae GN=FUN30 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.742e-14 Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 1 Query: 649 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNEISR 858 LK YQ G+ WL L+QN ++ ILAD MGLGKT Q I+F A+LK GP+LV+ P STL NW+ E + Sbjct: 572 LKDYQQTGINWLNLLYQNKMSCILADDMGLGKTCQVISFFAYLKQINEPGPHLVVVPSSTLENWLREFQK 641 The following BLAST results are available for this feature:
BLAST of CN184935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184935 ID=CN184935; Name=CN184935; organism=Citrus sinensis; type=EST; length=858bpback to top |