DC887580

Overview
NameDC887580
Unique NameDC887580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length325
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3410 contig Csv1_Contig3410:499..825. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DC887580 vs. ExPASy Swiss-Prot
Match: NACA_MAGGR (Nascent polypeptide-associated complex subunit alpha OS=Magnaporthe grisea GN=EGD2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.999e-11
Identity = 33/48 (68.75%), Postives = 40/48 (83.33%), Query Frame = -3 
Query:   93 DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 236
            DDEEVD  G+E KDIELVMTQAGV R++A+KALK  D DIV++IM L+
Sbjct:  153 DDEEVDADGIEDKDIELVMTQAGVSRTKAIKALKENDNDIVNSIMALS 200
[Close]
BLAST of DC887580 vs. ExPASy Swiss-Prot
Match: NACA_KLULA (Nascent polypeptide-associated complex subunit alpha OS=Kluyveromyces lactis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.410e-11
Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = -3 
Query:   93 NVASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 275
            +   KP +   V DD EVDETG+   DIELVM QAGVPR++A KALK  D DIV+AIM L+
Sbjct:  116 SATDKPSADDAV-DDAEVDETGLNADDIELVMQQAGVPRAKAAKALKEHDSDIVNAIMALS 175
[Close]
BLAST of DC887580 vs. ExPASy Swiss-Prot
Match: NACA_EMENI (Nascent polypeptide-associated complex subunit alpha OS=Emericella nidulans GN=egd2 PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.596e-11
Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = -3 
Query:   93 PESSAMVQ----DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 260
            PE+ A  +    D EEVDETG+EPKDI+LVM QA V R +AVKAL+  D DIV++IM L+
Sbjct:  143 PETEAKKEEEEDDGEEVDETGLEPKDIDLVMAQANVSRKKAVKALRENDNDIVNSIMALS 202
[Close]
BLAST of DC887580 vs. ExPASy Swiss-Prot
Match: NACAD_HUMAN (NAC-alpha domain-containing protein 1 OS=Homo sapiens GN=NACAD PE=2 SV=3)

HSP 1 Score: 65.4698 bits (158), Expect = 9.920e-11
Identity = 40/82 (48.78%), Postives = 53/82 (64.63%), Query Frame = -3 
Query:   93 AAEQFKVPPPNTGNVA-SKPESSAMVQ-------DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 314
            AAE+FKVP   +  V  S P     ++       ++EEVDE G+E +DIELVM QA V R++AV+AL+    DIV+AIMELT
Sbjct: 1480 AAEKFKVPSEPSALVPESAPRPRVRLECKEEEEEEEEEVDEAGLELRDIELVMAQANVSRAKAVRALRDNHSDIVNAIMELT 1561
The following BLAST results are available for this feature:
BLAST of DC887580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
NACA_MAGGR1.999e-1168.75Nascent polypeptide-associated complex subunit alp... [more]
NACA_KLULA3.410e-1159.02Nascent polypeptide-associated complex subunit alp... [more]
NACA_EMENI7.596e-1158.33Nascent polypeptide-associated complex subunit alp... [more]
NACAD_HUMAN9.920e-1148.78NAC-alpha domain-containing protein 1 OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionDC887580 EIC Citrus sinensis cDNA clone EIC0587 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887580 ID=DC887580; Name=DC887580; organism=Citrus sinensis; type=EST; length=325bp
ATTGTAAATGGTAACAGCGAGAAAAAAAAAAAAAAGATTTCCTTATGGGA
TCATTCAGCAGAGCAACATAATTAAGAAAGTGACCATCAATTTGTTAGCT
CCATAATGGCAGAAACGATGTCACCATCTGCGGCTTTGAGTGCTTTCACA
GCCCTTGACCTCGGTACCCCAGCTTGAGTCATTACCAACTCAATGTCCTT
TGGCTCCACACCAGTCTCATCTACTTCTTCGTCATCTTGAACCATGGCCG
ATGACTCAGGCTTTGATGCCACATTACCTGTGTTAGGAGGAGGGACCTTG
AACTGCTCTGCAGCCTGAGTTTGCA
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