CN184932

Overview
NameCN184932
Unique NameCN184932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKW_ARATH (Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.472e-15
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 3
Query:  435 GGGKP-KESTIPEERGTEPEQSLDKSFGYNKNFGAKYELGKEVGRGHFGHTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            GGG+P K   + +  G E E              +KY LG+E+GRG FG T     K+    D   A K I K K+ TA+ IEDVRREV+I++ +  H ++V   +  ED + V++VMELCEGGEL
Sbjct:   41 GGGRPLKLIVLNDPTGREIE--------------SKYTLGRELGRGEFGVTYLCTDKE---TDDVFACKSILKKKLRTAVDIEDVRREVEIMRHMPEHPNVVTLKETYEDEHAVHLVMELCEGGEL 149          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKD_ARATH (Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana GN=CPK13 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.472e-15
Identity = 48/98 (48.98%), Postives = 61/98 (62.24%), Query Frame = 3
Query:  522 KNFGAKYELGKEVGRGHFGHT--CSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            +N   +Y L +E+GRG FG T  C  R  +  L     A K ISK K+ TA+ IEDV+REV I+K L     +V   +ACED N V++VMELCEGGEL
Sbjct:   48 ENIEDRYLLDRELGRGEFGVTYLCIERSSRDLL-----ACKSISKRKLRTAVDIEDVKREVAIMKHLPKSSSIVTLKEACEDDNAVHLVMELCEGGEL 140          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPK2_ORYSJ (Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.217e-15
Identity = 47/94 (50.00%), Postives = 63/94 (67.02%), Query Frame = 3
Query:  540 YELGKEVGRGHFGHT--CS--ARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            Y LGKE+GRG FG T  C+  A GK       Q A K ISK K+ +    ED+RRE++I++ LSG +++V+F  A ED +NV++VMELC GGEL
Sbjct:   85 YSLGKELGRGQFGVTYLCTEIASGK-------QYACKSISKRKLVSKADKEDIRREIQIMQHLSGQQNIVEFRGAYEDKSNVHVVMELCAGGEL 171          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPK2_ARATH (Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.217e-15
Identity = 50/124 (40.32%), Postives = 68/124 (54.84%), Query Frame = 3
Query:  444 KPKESTIPEERGTEPEQSLDKSFGYNKNFGAKYELGKEVGRGHFGHT--CSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            KPK        G   E  L +     +NF   Y LG+++G+G FG T  C  +G   E      A K ISK K+ T   +EDVRRE++I+  L+GH +++    A EDV  V++VMELC GGEL
Sbjct:  157 KPKHMRRVSSAGLRTESVLQRK---TENFKEFYSLGRKLGQGQFGTTFLCLEKGTGNEY-----ACKSISKRKLLTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMELCSGGEL 272          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKT_ARATH (Calcium-dependent protein kinase 29 OS=Arabidopsis thaliana GN=CPK29 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 9.395e-15
Identity = 45/95 (47.37%), Postives = 60/95 (63.16%), Query Frame = 3
Query:  525 NFGAKYELGKEVGRGHFGHTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            +  A Y+L KE+GRG FG T     K      ++ A K ISK K+     IEDVRREV IL+ L+G  ++V+F  A ED +N+++VMELC GGEL
Sbjct:   80 DLSALYDLHKELGRGQFGITYKCTDKSN---GREYACKSISKRKLIRRKDIEDVRREVMILQHLTGQPNIVEFRGAYEDKDNLHLVMELCSGGEL 171          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPK3_ARATH (Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.602e-14
Identity = 44/90 (48.89%), Postives = 59/90 (65.56%), Query Frame = 3
Query:  540 YELGKEVGRGHFGHTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            YE G+E+GRG FG T     K+ +   QQVA K I   ++     IEDVRREV+I+  LSGH+++V    A ED ++V ++MELCEGGEL
Sbjct:   78 YEFGRELGRGQFGVTYLVTHKETK---QQVACKSIPTRRLVHKDDIEDVRREVQIMHHLSGHRNIVDLKGAYEDRHSVNLIMELCEGGEL 164          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKH_ARATH (Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.093e-14
Identity = 44/94 (46.81%), Postives = 59/94 (62.77%), Query Frame = 3
Query:  534 AKYELGKEVGRGHFG--HTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            A Y LGKE+GRG FG  H C+ +         Q A K I+K K+     IEDVRREV+I+  L+G  ++V+   A ED ++V++VMELC GGEL
Sbjct:   71 ASYSLGKELGRGQFGVTHLCTQKAT-----GHQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGEL 159          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKK_ARATH (Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana GN=CPK20 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.733e-14
Identity = 45/123 (36.59%), Postives = 70/123 (56.91%), Query Frame = 3
Query:  444 KPKESTIPEERGTEPEQSLDKSFGYN-KNFGAKYELGKEVGRGHFGHTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            KP++     +R       +D   G   +N    Y +G+++G+G FG T     KK     ++ A K I+K K+TT   +EDVRRE++I+  LSGH ++++   A ED   V++VME+C GGEL
Sbjct:  101 KPQKKEAHMKRMASAGLQIDSVLGRKTENLKDIYSVGRKLGQGQFGTTFLCVDKK---TGKEFACKTIAKRKLTTPEDVEDVRREIQIMHHLSGHPNVIQIVGAYEDAVAVHVVMEICAGGEL 220          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPK2_MAIZE (Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.662e-14
Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 3
Query:  540 YELGKEVGRGHFGHT--CSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            Y  GKE+GRG FG T  C+          +Q A K ISK K+ +    ED+RRE++I++ LSG  ++V+F  A ED +NV++VMELC GGEL
Sbjct:   65 YSFGKELGRGQFGVTYLCTEIAS-----GRQYACKSISKRKLVSKADREDIRREIQIMQHLSGQPNIVEFRGAYEDKSNVHVVMELCAGGEL 151          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKY_ARATH (Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.039e-13
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 3
Query:  534 AKYELGKEVGRGHFG--HTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            + Y LGKE+GRG FG  H C+ +         Q A K I+K K+     IEDVRREV+I+  L+G  ++V+   A ED ++V++VMELC GGEL
Sbjct:   66 SSYTLGKELGRGQFGVTHLCTQKAT-----GLQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGEL 154          
The following BLAST results are available for this feature:
BLAST of CN184932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
CDPKW_ARATH2.472e-1541.27Calcium-dependent protein kinase 32 OS=Arabidopsis... [more]
CDPKD_ARATH2.472e-1548.98Calcium-dependent protein kinase 13 OS=Arabidopsis... [more]
CDPK2_ORYSJ4.217e-1550.00Calcium-dependent protein kinase isoform 2 OS=Oryz... [more]
CDPK2_ARATH4.217e-1540.32Calcium-dependent protein kinase 2 OS=Arabidopsis ... [more]
CDPKT_ARATH9.395e-1547.37Calcium-dependent protein kinase 29 OS=Arabidopsis... [more]
CDPK3_ARATH1.602e-1448.89Calcium-dependent protein kinase 3 OS=Arabidopsis ... [more]
CDPKH_ARATH2.093e-1446.81Calcium-dependent protein kinase 17 OS=Arabidopsis... [more]
CDPKK_ARATH2.733e-1436.59Calcium-dependent protein kinase 20 OS=Arabidopsis... [more]
CDPK2_MAIZE4.662e-1446.74Calcium-dependent protein kinase 2 OS=Zea mays GN=... [more]
CDPKY_ARATH1.039e-1345.74Calcium-dependent protein kinase 34 OS=Arabidopsis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0006G05_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184932 ID=CN184932; Name=CN184932; organism=Citrus sinensis; type=EST; length=810bp
GAGGATCAGATCCGTGTTGGAGATTTTGTACCGTCCGATGTGTGGACTTT
GATTGAGTCTCGATCGGACGAGAAGCCGGTGCTGGATTCCTTACGATGGG
GCAGTGTTACGGTAAGACCATCCCAACAACTGAAAATGACGCCACAACGA
GCGCAACCACAACGACTATGGTCGTATCCGCCAATCAAAATCAAACGCCG
TTACCGCCGTCAACTCCAGGTAACGGTTCCATGCCGGTGAAGAATACCCC
GGGACGGTCCTCTCACCCGAGCCCCTGGCCGAGTCCTTATCCTCACGGCG
TTTCGGCCAGTCCACTGCCTGCCGGCGTCTCTCCGTCTCCGGCTAGAGCG
TCGACGCCGAGGAGATTTTTTAGAAGGCCGTTCCCTCCGCCATCTCCGGC
GAAACACATTAAGGCGTCTTTAGCTAAGCGACTTGGCGGTGGGAAGCCAA
AAGAAAGTACGATTCCCGAAGAGCGAGGAACCGAACCGGAGCAGTCGCTC
GACAAGAGCTTCGGGTACAACAAGAATTTTGGGGCTAAGTATGAGCTTGG
AAAGGAAGTAGGGCGAGGCCATTTTGGTCATACTTGCTCTGCTAGAGGTA
AAAAGGGTGAGCTCAAGGATCAGCAAGTTGCTGTCAAGATAATATCTAAA
GCCAAGATGACGACAGCAATATCAATTGAGGATGTGCGGAGGGAGGTGAA
AATATTGAAAGCATTGTCAGGACATAAGCATCTAGTCAAATTCTGTGATG
CTTGTGAGGATGTGAACAATGTGTACATAGTCATGGAATTGTGTGAGGGT
GGAGAACTTC
back to top