CN184932

Overview
NameCN184932
Unique NameCN184932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKE_ARATH (Calcium-dependent protein kinase 14 OS=Arabidopsis thaliana GN=CPK14 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.357e-13
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 3
Query:  537 KYELGKEVGRGHFGHT-CSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            KY+LG+E+GRG FG T      + GE+     A K I K K+ T+I IEDV+REV+I++ +  H ++V   +  ED   V++VMELCEGGEL
Sbjct:   53 KYKLGRELGRGEFGVTYLCTEIETGEI----FACKSILKKKLKTSIDIEDVKREVEIMRQMPEHPNIVTLKETYEDDKAVHLVMELCEGGEL 140          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPK1_ARATH (Calcium-dependent protein kinase 1 OS=Arabidopsis thaliana GN=CPK1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.772e-13
Identity = 46/122 (37.70%), Postives = 66/122 (54.10%), Query Frame = 3
Query:  444 KPKESTIPEERGTEPEQSLDKSFGYNKNFGAKYELGKEVGRGHFGHTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            KPK        G   E  L +     +NF   Y LG+++G+G FG T     K      ++ A K I+K K+ T   +EDVRRE++I+  L+GH +++    A EDV  V++VME C GGEL
Sbjct:  121 KPKHMKRVSSAGLRTESVLQRK---TENFKEFYSLGRKLGQGQFGTTFLCVEKT---TGKEFACKSIAKRKLLTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMECCAGGEL 236          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPK9_ARATH (Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.733e-13
Identity = 49/114 (42.98%), Postives = 66/114 (57.89%), Query Frame = 3
Query:  480 TEPEQSLDKSFGYNKNFGAKYELGKEVGRGHFGHTC----SARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            T+    L+ +F   K F   Y LGKE+GRG FG T     ++ GKK        A K ISK K+ T    +D+RRE++I++ LSG  ++V+F  A ED   V +VMELC GGEL
Sbjct:   74 TKSNSILENAFEDVKLF---YTLGKELGRGQFGVTYLCTENSTGKK-------YACKSISKKKLVTKADKDDMRREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGEL 177          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKJ_ARATH (Calcium-dependent protein kinase 19 OS=Arabidopsis thaliana GN=CPK19 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.793e-13
Identity = 49/122 (40.16%), Postives = 69/122 (56.56%), Query Frame = 3
Query:  450 KESTIPEERGTEPEQSLDKSFGYNKNFGAKYELGKEVGRGHFGHT--CSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            K+ST+ +     PE  L + F   ++   KY LG+E+GRG FG T  C+          +  A K I K K+      EDVRRE++I+  LSG  ++V+   A ED  +V++VMELCEGGEL
Sbjct:   76 KQSTLQQ-----PEPILGRPF---EDIKEKYSLGRELGRGQFGITYICTEISS-----GKNFACKSILKRKLIRTKDREDVRREIQIMHYLSGQPNIVEIKGAYEDRQSVHLVMELCEGGEL 184          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPK_DAUCA (Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.500e-12
Identity = 48/124 (38.71%), Postives = 68/124 (54.84%), Query Frame = 3
Query:  444 KPKESTIPEERGTEPEQSLDKSFGYNKNFGAKYELGKEVGRGHFG--HTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            KP++   PE         L K F   ++   KY LGKE+GRG FG  + C+          Q  A K I K K+ +    ED++RE++IL+ LSG  ++V+F    ED  +V++VMELC GGEL
Sbjct:   57 KPRQVHRPESNTI-----LGKPF---EDIRGKYTLGKELGRGQFGCVYQCTENSS-----GQLYACKSILKRKLVSKNDKEDIKREIQILQHLSGQPNIVEFKGVFEDRQSVHLVMELCAGGEL 167          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPK4_SOLTU (Calcium-dependent protein kinase 4 OS=Solanum tuberosum GN=CPK4 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.959e-12
Identity = 41/92 (44.57%), Postives = 57/92 (61.96%), Query Frame = 3
Query:  540 YELGKEVGRGHFGHT--CSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            Y LG+++G+G FG T  C+      E      A K ISK K+ +   +EDVRRE++I+  LSGH+++V    A ED   V+IVME+C GGEL
Sbjct:   94 YTLGRKLGQGQFGTTYLCTENSTGAEY-----ACKSISKRKLISKEDVEDVRREIQIMHHLSGHRNIVTIKGAYEDPLYVHIVMEICSGGEL 180          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKX_ARATH (Calcium-dependent protein kinase 33 OS=Arabidopsis thaliana GN=CPK33 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.341e-12
Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = 3
Query:  540 YELGKEVGRGHFGHTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            Y L KE+GRG FG T     K      ++ A K ISK K+ T    ED+RRE++I++ LSG  ++V+F  A ED   V +VMELC GGEL
Sbjct:   73 YTLSKELGRGQFGVTYLCTEKS---TGKRFACKSISKKKLVTKGDKEDMRREIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGEL 159          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKB_ORYSJ (Calcium-dependent protein kinase isoform 11 OS=Oryza sativa subsp. japonica GN=CPK11 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.341e-12
Identity = 42/92 (45.65%), Postives = 56/92 (60.87%), Query Frame = 3
Query:  540 YELGKEVGRGHFGHT--CSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            Y +G+++G+G FG T  C+      E      A K I K K+ T   +EDVRRE++I+  LSGHK++V   D  ED   V+IVMELC GGEL
Sbjct:   79 YIIGRKLGQGQFGTTYLCTEINTGCEY-----ACKTIPKRKLITKEDVEDVRREIQIMHHLSGHKNVVAIKDVYEDGQAVHIVMELCAGGEL 165          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKR_ARATH (Calcium-dependent protein kinase 27 OS=Arabidopsis thaliana GN=CPK27 PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 4.364e-12
Identity = 41/90 (45.56%), Postives = 57/90 (63.33%), Query Frame = 3
Query:  540 YELGKEVGRGHFGHTCSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            Y LG+E+GRG+FG T     K      +  A K I K K+      EDV+RE++I+K LSG  ++V+F +A ED ++V+IVME C GGEL
Sbjct:   28 YILGEELGRGNFGLTRKCVEKS---TGKTFACKTILKTKLKDEECEEDVKREIRIMKQLSGEPNIVEFKNAYEDKDSVHIVMEYCGGGEL 114          
BLAST of CN184932 vs. ExPASy Swiss-Prot
Match: CDPKL_ARATH (Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.700e-12
Identity = 45/111 (40.54%), Postives = 63/111 (56.76%), Query Frame = 3
Query:  483 EPEQSLDKSFGYNKNFGAKYELGKEVGRGHFGHT--CSARGKKGELKDQQVAVKIISKAKMTTAISIEDVRREVKILKALSGHKHLVKFCDACEDVNNVYIVMELCEGGEL 809
            +P+  L K F   + F   Y LGKE+GRG FG T  C   G          A K I K K+ +    EDV+RE++I++ LSG  ++V+   A ED  ++++VMELC GGEL
Sbjct:   64 DPDTILGKPFEDIRKF---YSLGKELGRGQFGITYMCKEIGT-----GNTYACKSILKRKLISKQDKEDVKREIQIMQYLSGQPNIVEIKGAYEDRQSIHLVMELCAGGEL 166          
The following BLAST results are available for this feature:
BLAST of CN184932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
CDPKE_ARATH1.357e-1346.74Calcium-dependent protein kinase 14 OS=Arabidopsis... [more]
CDPK1_ARATH1.772e-1337.70Calcium-dependent protein kinase 1 OS=Arabidopsis ... [more]
CDPK9_ARATH6.733e-1342.98Calcium-dependent protein kinase 9 OS=Arabidopsis ... [more]
CDPKJ_ARATH8.793e-1340.16Calcium-dependent protein kinase 19 OS=Arabidopsis... [more]
CDPK_DAUCA1.500e-1238.71Calcium-dependent protein kinase OS=Daucus carota ... [more]
CDPK4_SOLTU1.959e-1244.57Calcium-dependent protein kinase 4 OS=Solanum tube... [more]
CDPKX_ARATH3.341e-1246.67Calcium-dependent protein kinase 33 OS=Arabidopsis... [more]
CDPKB_ORYSJ3.341e-1245.65Calcium-dependent protein kinase isoform 11 OS=Ory... [more]
CDPKR_ARATH4.364e-1245.56Calcium-dependent protein kinase 27 OS=Arabidopsis... [more]
CDPKL_ARATH5.700e-1240.54Calcium-dependent protein kinase 21 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006G05_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184932 ID=CN184932; Name=CN184932; organism=Citrus sinensis; type=EST; length=810bp
GAGGATCAGATCCGTGTTGGAGATTTTGTACCGTCCGATGTGTGGACTTT
GATTGAGTCTCGATCGGACGAGAAGCCGGTGCTGGATTCCTTACGATGGG
GCAGTGTTACGGTAAGACCATCCCAACAACTGAAAATGACGCCACAACGA
GCGCAACCACAACGACTATGGTCGTATCCGCCAATCAAAATCAAACGCCG
TTACCGCCGTCAACTCCAGGTAACGGTTCCATGCCGGTGAAGAATACCCC
GGGACGGTCCTCTCACCCGAGCCCCTGGCCGAGTCCTTATCCTCACGGCG
TTTCGGCCAGTCCACTGCCTGCCGGCGTCTCTCCGTCTCCGGCTAGAGCG
TCGACGCCGAGGAGATTTTTTAGAAGGCCGTTCCCTCCGCCATCTCCGGC
GAAACACATTAAGGCGTCTTTAGCTAAGCGACTTGGCGGTGGGAAGCCAA
AAGAAAGTACGATTCCCGAAGAGCGAGGAACCGAACCGGAGCAGTCGCTC
GACAAGAGCTTCGGGTACAACAAGAATTTTGGGGCTAAGTATGAGCTTGG
AAAGGAAGTAGGGCGAGGCCATTTTGGTCATACTTGCTCTGCTAGAGGTA
AAAAGGGTGAGCTCAAGGATCAGCAAGTTGCTGTCAAGATAATATCTAAA
GCCAAGATGACGACAGCAATATCAATTGAGGATGTGCGGAGGGAGGTGAA
AATATTGAAAGCATTGTCAGGACATAAGCATCTAGTCAAATTCTGTGATG
CTTGTGAGGATGTGAACAATGTGTACATAGTCATGGAATTGTGTGAGGGT
GGAGAACTTC
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