CN184923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL2_CANGA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Candida glabrata GN=VMA11 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.867e-25 Identity = 57/125 (45.60%), Postives = 78/125 (62.40%), Query Frame = 2 Query: 131 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505 SC+GAA GTAKSG+G+A +G +PEL+MKS++PVVM+G+L IYGL++AV+I+ +SP Y LF+G+ AIGIVGD GVR QP+LFVG+ YG++ Sbjct: 30 SCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIAGNLSP-TEEYTLFNGFMHLSCGLCVGFACLSSGYAIGIVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMI 153
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL_HUMAN (V-type proton ATPase 16 kDa proteolipid subunit OS=Homo sapiens GN=ATP6V0C PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.891e-25 Identity = 60/125 (48.00%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 131 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505 S +GAAYGTAKSG G+A+M VMRPE +MKSI+PVVMAG++ IYGL++AV+I+ ++ L+ + AIGIVGDAGVR AQQP+LFVGM YGL+ Sbjct: 26 SALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLIANSLND---DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 147
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL2_YEAST (V-type proton ATPase subunit c' OS=Saccharomyces cerevisiae GN=VMA11 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.387e-25 Identity = 56/125 (44.80%), Postives = 78/125 (62.40%), Query Frame = 2 Query: 131 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505 SC+GAA GTAKSG+G+A +G +PEL+MKS++PVVM+G+L IYGL++AV+I+ +SP Y LF+G+ AIG+VGD GVR QP+LFVG+ YG++ Sbjct: 30 SCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIAGNLSP-TEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMI 153
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL1_CAEEL (V-type proton ATPase 16 kDa proteolipid subunit 1 OS=Caenorhabditis elegans GN=vha-1 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.090e-24 Identity = 56/122 (45.90%), Postives = 77/122 (63.11%), Query Frame = 2 Query: 140 GAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505 G+AYGTAK+G G+ASM V RP+LVMK+I+PVVMAG++ IYGL++AVI+S + P +Y + + + AIGI GDAGVRA +QQP++FVGM YG++ Sbjct: 40 GSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQPRMFVGMILILIFAEVLGLYGMI 161
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL_CANTR (V-type proton ATPase 16 kDa proteolipid subunit OS=Candida tropicalis GN=VMA3 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.423e-24 Identity = 57/125 (45.60%), Postives = 78/125 (62.40%), Query Frame = 2 Query: 131 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505 +C GA+YGTAKSGVG+ + V RP+L++K++VPVVMAG++ IYGL+++V++S +S K L+ G+ AIGIVGDAGVR AQQP+LFVGM YGL+ Sbjct: 24 TCFGASYGTAKSGVGICATSVTRPDLLVKNVVPVVMAGIIAIYGLVVSVLVSDSLSQKQA---LYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 145
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL2_ASHGO (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Ashbya gossypii GN=VMA11 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.858e-24 Identity = 55/125 (44.00%), Postives = 78/125 (62.40%), Query Frame = 2 Query: 131 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505 S +GAA GTAKSG+G++ +G RPEL+MKS++PVVM+G+L +YGL++AV+++ G+SP Y LF+G+ AIGIVGD GVR QP+LFVG+ YG++ Sbjct: 29 SSLGAAIGTAKSGIGISGIGTFRPELIMKSLIPVVMSGILAVYGLVVAVLVAGGLSP-TEEYTLFNGFMHLAAGLCVGFACLSSGYAIGIVGDVGVRKFMHQPRLFVGIVLILIFAEVLGLYGMI 152
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL2_DEBHA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Debaryomyces hansenii GN=VMA11 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.427e-24 Identity = 54/125 (43.20%), Postives = 79/125 (63.20%), Query Frame = 2 Query: 131 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505 SC GAA GTAKSG+G++ +G +PEL+MKS++PVVM+G+L +YGL+++V+I+ G+SP +Y LF+G+ +IGIVGD GVR QP+LFVG+ YG++ Sbjct: 29 SCAGAAIGTAKSGIGISGIGTFKPELIMKSLIPVVMSGILSVYGLVVSVLIAGGLSP-TENYSLFNGFMHLACGLSVGFACLASGYSIGIVGDEGVRQFMHQPRLFVGIVLILIFAEVLGLYGMI 152
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL_DICDI (V-type proton ATPase proteolipid subunit OS=Dictyostelium discoideum GN=vatP PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.407e-24 Identity = 60/123 (48.78%), Postives = 77/123 (62.60%), Query Frame = 2 Query: 137 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505 MGAAYGTAK+ VG+++MGVM+P+LV+K+ +PV+ AGV+ IYGLII VI+ GI P A +Y L + MAIGIVGD+GVRA QQPKL+V M YGL+ Sbjct: 45 MGAAYGTAKASVGISNMGVMKPDLVIKAFIPVIFAGVIAIYGLIICVILVGGIKPNA-NYTLMKSFTDLGAGLTVGLCGLAAGMAIGIVGDSGVRAFGQQPKLYVIMMLILIFSEALGLYGLI 166
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL_SCHPO (V-type proton ATPase 16 kDa proteolipid subunit OS=Schizosaccharomyces pombe GN=vma3 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.505e-23 Identity = 55/122 (45.08%), Postives = 77/122 (63.11%), Query Frame = 2 Query: 140 GAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505 GAAYGTAK+GVG+++MGV+RP+L++K+ +PVVMAG++ IYGL+++V+IS + + L+ G+ AIGIVGDAGVR AQQP+LFV M YGL+ Sbjct: 28 GAAYGTAKAGVGISAMGVLRPDLIVKNTIPVVMAGIIAIYGLVVSVLISGNLK---QILSLYSGFIQLGAGLSVGLAGLAAGFAIGIVGDAGVRGTAQQPRLFVAMILILIFAEVLGLYGLI 146
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL1_YEAST (V-type proton ATPase subunit c OS=Saccharomyces cerevisiae GN=VMA3 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.739e-22 Identity = 54/123 (43.90%), Postives = 76/123 (61.79%), Query Frame = 2 Query: 137 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505 +GAAYGTAKSGVG+ + V+RP+L+ K+IVPV+MAG++ IYGL+++V++ + K L+ G+ AIGIVGDAGVR ++QQP+LFVGM YGL+ Sbjct: 26 LGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQA---LYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLI 145 The following BLAST results are available for this feature:
BLAST of CN184923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184923 ID=CN184923; Name=CN184923; organism=Citrus sinensis; type=EST; length=630bpback to top |