CN184923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL2_SCHPO (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Schizosaccharomyces pombe GN=vma11 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.610e-22 Identity = 51/125 (40.80%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 131 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505 SC+GA YGTA +G G+A++G RPE+VMKS++PVVM+G++G+YGL+++V+I+ +SP Y LF G+ AIG+VGD GV++ +Q ++FV M YGL+ Sbjct: 25 SCLGAGYGTALAGRGIAAVGAFRPEIVMKSLIPVVMSGIIGVYGLVMSVLIAGDMSPD-NDYSLFSGFIHLSAGLAVGLTGVAAGYAIGVVGDRGVQSFMRQDRIFVSMVLILIFAEVLGLYGLI 148
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL2_NEUCR (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Neurospora crassa GN=vma-11 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 4.284e-21 Identity = 50/124 (40.32%), Postives = 73/124 (58.87%), Query Frame = 2 Query: 140 GAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISP--KARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505 GAAYGTAKSG+G+A +G RP+L+MK ++PVVM+G++ +Y L++AV+I+ + P + Y LF+G+ IGIVGD GVR+ Q ++FVGM YGL+ Sbjct: 33 GAAYGTAKSGIGIAGVGTFRPDLIMKCLIPVVMSGIIAVYALVVAVLIAQDLGPPGSGQHYSLFNGFMHLACGLSVGLTGLAAGYCIGIVGDKGVRSFMLQSRIFVGMVLILIFGEVLGLYGLI 156
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL_ENTHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Entamoeba histolytica GN=VMA3 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.247e-20 Identity = 51/122 (41.80%), Postives = 70/122 (57.38%), Query Frame = 2 Query: 140 GAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505 G AYGTAKS VG++S+GVM+PE +++S+ PVV AG++G+YGLI+ +++ ++ Y L + MAIGI GD GVR AQQPKLFVGM YG + Sbjct: 36 GGAYGTAKSSVGISSVGVMKPEFIVRSVAPVVFAGIIGLYGLIVCILLFINVTKS--EYSLNRAFLDLGAGLTCGLCGLASGMAIGISGDCGVRGAAQQPKLFVGMLICLIFSEALALYGFI 155
BLAST of CN184923 vs. ExPASy Swiss-Prot
Match: VATL_ENTDI (V-type proton ATPase 16 kDa proteolipid subunit OS=Entamoeba dispar GN=VMA3 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.737e-20 Identity = 51/122 (41.80%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 140 GAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGISPKARSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLM 505 G AYGTAKS VG++S+GVM+PE +M+S+ PVV AGV+G+YGLI+ +++ ++ Y L + M+IGI GD GVR AQQPKLFV M YG + Sbjct: 34 GGAYGTAKSSVGISSVGVMKPEFIMRSLFPVVFAGVIGLYGLIVCIVLFINVNKS--EYSLNRAFLDLGAGLTCGLCGLASGMSIGISGDCGVRGAAQQPKLFVSMLICLIFSEALALYGFI 153 The following BLAST results are available for this feature:
BLAST of CN184923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184923 ID=CN184923; Name=CN184923; organism=Citrus sinensis; type=EST; length=630bpback to top |