CN184918

Overview
NameCN184918
Unique NameCN184918
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig659 contig Csv1_Contig659:60..765. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN184918 vs. ExPASy Swiss-Prot
Match: SCP41_ARATH (Serine carboxypeptidase-like 41 OS=Arabidopsis thaliana GN=SCPL41 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.036e-36
Identity = 75/137 (54.74%), Postives = 97/137 (70.80%), Query Frame = 3
Query:  237 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERF 647
            D V +LPGQ   V F  Y+GYV ++  +GR+LFY+FVEA + PD+KPL LWLNGGPGCSS+  G   E+GPF+    G+ L +N  SWN+ +N+LF+DSP GVG+SYSN SSD    GDK  A D L FLL+W ++F
Sbjct:   27 DLVVRLPGQP-KVVFRQYAGYVDLDLNAGRSLFYYFVEAEKHPDTKPLTLWLNGGPGCSSVGGGAFTELGPFYPTGYGRGLRINSMSWNKASNLLFVDSPAGVGWSYSNRSSDYNA-GDKSAASDMLVFLLRWFDKF 161          

HSP 2 Score: 21.1718 bits (43), Expect = 1.036e-36
Identity = 9/21 (42.86%), Postives = 12/21 (57.14%), Query Frame = 2
Query:  647 FHNLKEGISNISGESYGGDYV 709
            F  LK     ++GESY G Y+
Sbjct:  161 FPELKSHDLFLTGESYAGHYI 181          
BLAST of CN184918 vs. ExPASy Swiss-Prot
Match: SCP20_ARATH (Serine carboxypeptidase-like 20 OS=Arabidopsis thaliana GN=SCPL20 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 3.219e-35
Identity = 75/140 (53.57%), Postives = 98/140 (70.00%), Query Frame = 3
Query:  243 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKT-----LYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERF 647
            + KLPG        HYSGYVT+++E G+ L+Y+F+E+ ++P   P+VLWLNGGPGCSS+  G   E GPF+ +   K      L+LNPYSW++V+NI++LDSPVGVGFSYSN  SD  T GD +TA DS  FLLKW + F
Sbjct:   35 ITKLPGFEGTFPSKHYSGYVTIDKEHGKNLWYYFIESEKNPSKDPVVLWLNGGPGCSSMD-GFVYEHGPFNFELPKKNNSLPLLHLNPYSWSKVSNIIYLDSPVGVGFSYSNNKSDYIT-GDIKTAVDSHAFLLKWFQMF 172          

HSP 2 Score: 21.557 bits (44), Expect = 3.219e-35
Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 2
Query:  677 ISGESYGGDYV 709
            ISGESY G YV
Sbjct:  182 ISGESYAGVYV 192          
BLAST of CN184918 vs. ExPASy Swiss-Prot
Match: NF314_NAEFO (Virulence-related protein Nf314 OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.696e-33
Identity = 67/135 (49.63%), Postives = 88/135 (65.19%), Query Frame = 3
Query:  243 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERF 647
            V +LPG + N+    Y+GY+  N   GR LFYWF E++ +P   PLV+W NGGPGCSS+  GEA E G F +  DG T+  NPYSWN+V+NIL+++ PVGVGFSYSN++ D     D + A D    L  +L RF
Sbjct:   16 VTQLPGLSGNIGVKSYTGYLLANATRGRYLFYWFFESMRNPSQDPLVMWTNGGPGCSSLG-GEASEHGLFLVNADGATITRNPYSWNRVSNILYIEQPVGVGFSYSNSTDDYQNLNDVQAASDMNNALRDFLTRF 149          

HSP 2 Score: 21.9422 bits (45), Expect = 1.696e-33
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 2
Query:  677 ISGESYGGDYV 709
            ++GESYGG YV
Sbjct:  159 LAGESYGGVYV 169          
BLAST of CN184918 vs. ExPASy Swiss-Prot
Match: CBP1_ORYSJ (Serine carboxypeptidase 1 OS=Oryza sativa subsp. japonica GN=CBP1 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.111e-33
Identity = 72/140 (51.43%), Postives = 93/140 (66.43%), Query Frame = 3
Query:  243 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKT-----LYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERF 647
            V  +PG +  +   HY+GYVTV E+ GR LFY+ VE+  DP   PLVLWLNGGPGCSS   G   E GPF+ +  G       L+LNPYSW++V+++++LDSP GVG SYS  +SD  T GD +TA DS  FLLKW + +
Sbjct:   43 VKSVPGFDGALPSKHYAGYVTVEEQHGRNLFYYLVESERDPAKDPLVLWLNGGPGCSSFD-GFVYEHGPFNFESGGSAKSLPKLHLNPYSWSKVSSVIYLDSPAGVGLSYSKNTSDYNT-GDLKTAADSHTFLLKWFQLY 180          
BLAST of CN184918 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.077e-32
Identity = 69/138 (50.00%), Postives = 96/138 (69.57%), Query Frame = 3
Query:  243 VGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKT---LYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERF 647
            +  LPG N      HY+GYV +++   + L+Y+FVE+  +    P+VLWLNGGPGCSS+  G   E GPF+ +P  K    L+LNPYSW++V+NI++LDSPVGVGFSYSN ++D TT+ D +TA D+  FLL+W + F
Sbjct:   30 ITNLPGFNGTFPSKHYAGYVAIDKHRNKNLWYYFVESERNASVDPVVLWLNGGPGCSSMD-GFVYEHGPFNFEPKKKNSHLLHLNPYSWSKVSNIIYLDSPVGVGFSYSNDNADYTTD-DTKTASDTHTFLLEWFKMF 165          

HSP 2 Score: 21.557 bits (44), Expect = 1.077e-32
Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 2
Query:  677 ISGESYGGDYV 709
            ISGESY G YV
Sbjct:  175 ISGESYAGIYV 185          
BLAST of CN184918 vs. ExPASy Swiss-Prot
Match: CBP1_HORVU (Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CBP1 PE=1 SV=4)

HSP 1 Score: 135.961 bits (341), Expect = 1.966e-31
Identity = 75/161 (46.58%), Postives = 98/161 (60.87%), Query Frame = 3
Query:  180 IIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKT-----LYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERF 647
            ++  L  A S    A  +   V  LPG +  +   HY+GYVTV+E  GR LFY+ VE+  DP   P+VLWLNGGPGCSS   G   E GPF+ +  G       L+LNPY+W++V+ +++LDSP GVG SYS   SD  T GD +TA DS  FLLKW + +
Sbjct:   16 LLLLLALALSGGGGAAPQGAEVTGLPGFDGALPSKHYAGYVTVDEGHGRNLFYYVVESERDPGKDPVVLWLNGGPGCSSFD-GFVYEHGPFNFESGGSVKSLPKLHLNPYAWSKVSTMIYLDSPAGVGLSYSKNVSDYET-GDLKTATDSHTFLLKWFQLY 174          
BLAST of CN184918 vs. ExPASy Swiss-Prot
Match: YSS2_CAEEL (Uncharacterized serine carboxypeptidase K10B2.2 OS=Caenorhabditis elegans GN=K10B2.2 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.174e-30
Identity = 71/163 (43.56%), Postives = 102/163 (62.58%), Query Frame = 3
Query:  159 VQILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERF 647
            +++L I  IF    +F    +A    D+V  LPG  F  +F HYSGY+    +  + L YW  E+   P   PLVLWLNGGPGCSS+  G  EE+GPFH+K  G ++Y N Y+WN+ AN+LFL+SP GVG+SYS T+ ++T + D+ +  + +  LL +L +F
Sbjct:    1 MKLLSILFIFVSSYSFC---LAAPATDKVNDLPGLTFTPDFFHYSGYLRAWTD--KYLHYWLTESSRAPTQDPLVLWLNGGPGCSSLD-GLIEELGPFHVKDFGNSIYYNEYAWNKFANVLFLESPAGVGYSYS-TNFNLTVSDDEVSLHNYMA-LLDFLSKF 155          
BLAST of CN184918 vs. ExPASy Swiss-Prot
Match: YPP3_CAEEL (Uncharacterized serine carboxypeptidase F32A5.3 OS=Caenorhabditis elegans GN=F32A5.3 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.260e-30
Identity = 65/146 (44.52%), Postives = 89/146 (60.96%), Query Frame = 3
Query:  192 LGSAFSTDPVAQQ-KLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFL 626
            LG AF    V  Q + D +  LPG  F  NF  YSGYV  N      + Y   E+  +PD+ PL++W NGGPGCSS+  G  EE+GPF++  DG+TLY NPY+WN  AN+L+L+SP+GVG+SY  T+       D ++A  + + L
Sbjct:    6 LGVAFLVVTVLSQGEKDLIQNLPGLLFKANFKSYSGYVDANANGTWKMHYMLTESRSNPDTDPLLVWFNGGPGCSSLG-GLFEELGPFYVNFDGQTLYENPYAWNAKANVLYLESPIGVGYSYDTTTPGYFQANDDQSAAQNYQAL 150          
BLAST of CN184918 vs. ExPASy Swiss-Prot
Match: YUW5_CAEEL (Uncharacterized serine carboxypeptidase F41C3.5 OS=Caenorhabditis elegans GN=F41C3.5 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 6.551e-29
Identity = 61/139 (43.88%), Postives = 91/139 (65.47%), Query Frame = 3
Query:  237 DRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFFT 653
            + +  LPG +F  NF HYSG+  V++     L YWFVE+  +P + PL+ W NGGPGCSS+  G   E+GP+    DGKTL  N YSWN++A++++++SP GVG+SY+ T  +ITTN D  + E+      + +++FFT
Sbjct:   17 EEIKDLPGLDFEPNFKHYSGFFQVSDN--HVLHYWFVESQNEPSNDPLIFWFNGGPGCSSLD-GLLNEMGPYVANEDGKTLRENEYSWNKMASVVYIESPAGVGYSYA-TDGNITTNDDLTSLEN-----YEAVKQFFT 146          

HSP 2 Score: 22.7126 bits (47), Expect = 6.551e-29
Identity = 11/23 (47.83%), Postives = 13/23 (56.52%), Query Frame = 2
Query:  641 TVFHNLKEGISNISGESYGGDYV 709
            T F   +   + I GESYGG YV
Sbjct:  146 TEFPQFRHHQTFIMGESYGGVYV 168          
BLAST of CN184918 vs. ExPASy Swiss-Prot
Match: PPGB_HUMAN (Lysosomal protective protein OS=Homo sapiens GN=CTSA PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 6.992e-29
Identity = 68/165 (41.21%), Postives = 99/165 (60.00%), Query Frame = 3
Query:  153 FLVQILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERF 647
            FL+ +L + ++     ++++   A    D + +LPG     +F  YSGY+       + L YWFVE+ +DP++ P+VLWLNGGPGCSS+  G   E GPF ++PDG TL  NPYSWN +AN+L+L+SP GVGFSYS+     T   D   A+ + + L  +   F
Sbjct:   10 FLLLLLLLLLV-----SWASRGEAAPDQDEIQRLPGLAKQPSFRQYSGYL--KGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSLD-GLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYAT--NDTEVAQSNFEALQDFFRLF 164          
The following BLAST results are available for this feature:
BLAST of CN184918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
SCP41_ARATH1.036e-3654.74Serine carboxypeptidase-like 41 OS=Arabidopsis tha... [more]
SCP20_ARATH3.219e-3553.57Serine carboxypeptidase-like 20 OS=Arabidopsis tha... [more]
NF314_NAEFO1.696e-3349.63Virulence-related protein Nf314 OS=Naegleria fowle... [more]
CBP1_ORYSJ6.111e-3351.43Serine carboxypeptidase 1 OS=Oryza sativa subsp. j... [more]
SCP21_ARATH1.077e-3250.00Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
CBP1_HORVU1.966e-3146.58Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CB... [more]
YSS2_CAEEL2.174e-3043.56Uncharacterized serine carboxypeptidase K10B2.2 OS... [more]
YPP3_CAEEL8.260e-3044.52Uncharacterized serine carboxypeptidase F32A5.3 OS... [more]
YUW5_CAEEL6.551e-2943.88Uncharacterized serine carboxypeptidase F41C3.5 OS... [more]
PPGB_HUMAN6.992e-2941.21Lysosomal protective protein OS=Homo sapiens GN=CT... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006F20_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006F20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184918 ID=CN184918; Name=CN184918; organism=Citrus sinensis; type=EST; length=709bp
GAGGGATAAACTGAACAAAGAAAAAAAAAAAATTCCTCAGAACACTATCA
TTGGCTCCAACGTTTTTGCTTGATTATGTCTTCTTTATAAGTCGCAGTAC
CCCAGTACACTAAACCATATAAAAAATGGCTTATAATCCAAAAGGGGCTT
CCTTTCTTGTTCAAATCTTGTTCATTTGCATAATTTTTTATCTGGGCAGT
GCCTTTTCAACAGACCCAGTTGCCCAGCAAAAACTTGACAGAGTTGGGAA
GCTACCTGGGCAAAATTTCAATGTCAACTTTGCCCATTACTCTGGTTATG
TCACAGTCAACGAAGAATCCGGGAGGGCTCTCTTTTATTGGTTCGTTGAA
GCTGTTGAAGATCCTGATTCCAAGCCTCTTGTGCTTTGGCTCAATGGAGG
GCCTGGGTGTTCATCCATTGCTTATGGAGAGGCAGAGGAAATAGGTCCTT
TTCACATCAAGCCAGATGGGAAGACCTTATACTTGAATCCTTACTCTTGG
AATCAAGTTGCCAACATTCTGTTTCTTGATTCCCCCGTTGGTGTTGGTTT
TTCATATTCAAATACATCCTCTGATATTACGACCAATGGCGATAAAAGGA
CTGCGGAGGATTCCCTAAAATTTTTACTAAAGTGGTTAGAACGGTTTTTC
ACAATTTAAAGGAAGGGATTTCTAACATCTCCGGGGAGAGTTATGGAGGG
GATTATGTT
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