CN184887

Overview
NameCN184887
Unique NameCN184887
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184887 vs. ExPASy Swiss-Prot
Match: PPA10_ARATH (Purple acid phosphatase 10 OS=Arabidopsis thaliana GN=PAP10 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.730e-23
Identity = 66/160 (41.25%), Postives = 77/160 (48.12%), Query Frame = 2
Query:   32 HYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL-----------DPCGPVHITIGDGGNLEKMAITRADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIY 478
            HY E E MRV  EA    Y VD+VF GHVHAYERS RV N              D   PV+ITIGDGGN+E +A T+  EP                                   QP YSAFRE+SFGH I  +KN T A + WHRN D     GD+++
Sbjct:  328 HYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERVSNIAYNVVNGICTPVKDQSAPVYITIGDGGNIEGLA-TKMTEP-----------------------------------QPKYSAFREASFGHAIFSIKNRTHAHYGWHRNHDGYAVEGDRMW 451          
BLAST of CN184887 vs. ExPASy Swiss-Prot
Match: PPA5_ARATH (Purple acid phosphatase 5 OS=Arabidopsis thaliana GN=PAP5 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.068e-23
Identity = 67/161 (41.61%), Postives = 80/161 (49.69%), Query Frame = 2
Query:   32 HYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFN--YTL---------DPCGPVHITIGDGGNLEKMAITRADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYI 481
            HY E E MRV  E       VDIVF GHVHAYERS RV N  Y +         D   PV+ITIGDGGN+E +                          A  FT          D QP YSAFRE+SFGH +LE+KN T A +TWHRN++    + D I++
Sbjct:  260 HYMEGESMRVTFEPWFVENKVDIVFAGHVHAYERSERVSNIQYNITDGMSTPVKDQNAPVYITIGDGGNIEGI--------------------------ANIFT----------DPQPSYSAFREASFGHALLEIKNRTHAHYTWHRNKEDEAVIADSIWL 384          
BLAST of CN184887 vs. ExPASy Swiss-Prot
Match: PPAF1_IPOBA (Purple acid phosphatase 1 OS=Ipomoea batatas GN=PAP1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.054e-22
Identity = 64/164 (39.02%), Postives = 79/164 (48.17%), Query Frame = 2
Query:   32 HYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL-----------DPCGPVHITIGDGGNLEKMAITRADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQ 490
            HY E E MR   E     Y VDIVF+GHVH+YERS RV N              D   PV+ITIGDGGN E +A             S    P                       QP YSAFRE+SFGHGI ++KN T A ++WHRNQD  +   D ++++ +
Sbjct:  333 HYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLA-------------SEMTQP-----------------------QPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNR 460          
BLAST of CN184887 vs. ExPASy Swiss-Prot
Match: PPA25_ARATH (Purple acid phosphatase 25 OS=Arabidopsis thaliana GN=PAP25 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.054e-22
Identity = 63/161 (39.13%), Postives = 81/161 (50.31%), Query Frame = 2
Query:   32 HYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFN--YTL---------DPCGPVHITIGDGGNLEKMAITRADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYI 481
            HY E E MR   E+   +  VD+V +GHVH+YERS RV N  Y +         DP  P++ITIGDGGN+E +                          A +FT          D QP YSA+RE+SFGH +LE+ N T A +TWHRNQD+     D I +
Sbjct:  324 HYMEGESMRAMFESWFVNSKVDLVLSGHVHSYERSERVSNIKYNITNGLSYPVKDPSAPIYITIGDGGNIEGI--------------------------ANSFT----------DPQPSYSAYREASFGHAVLEIYNRTHAYYTWHRNQDNEPVAADSIML 448          
BLAST of CN184887 vs. ExPASy Swiss-Prot
Match: PPA20_ARATH (Probable inactive purple acid phosphatase 20 OS=Arabidopsis thaliana GN=PAP20 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.347e-22
Identity = 60/148 (40.54%), Postives = 77/148 (52.03%), Query Frame = 2
Query:   38 REAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMAITRADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYI 481
            +E+  M+  ME LLY   VD+VF GHVHAYER +RV+    D CGPV+I IGDGGNLE +A T+  +P                                    P+ S FRE+SFGHG L V+N T A W WHRN D  +   D +++
Sbjct:  305 KESVEMKESMETLLYKARVDLVFAGHVHAYERFSRVYQDKFDKCGPVYINIGDGGNLEGLA-TKYRDP-----------------------------------NPEISLFREASFGHGQLVVENATHARWEWHRNDDDVSVEKDSVWL 416          
BLAST of CN184887 vs. ExPASy Swiss-Prot
Match: PPA19_ARATH (Purple acid phosphatase 19 OS=Arabidopsis thaliana GN=PAP19 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.920e-22
Identity = 65/150 (43.33%), Postives = 75/150 (50.00%), Query Frame = 2
Query:   32 HYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFN--YTL---------DPCGPVHITIGDGGNLEKMAITRADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQD 448
            HY E E MRV  E       VDIVF GHVHAYERS R+ N  Y +         D   PV+ITIGDGGN+E +A                           NF           D QP YSAFRE+SFGH ILE+KN T A +TWHRN++
Sbjct:  248 HYMEGESMRVTFEPWFVENKVDIVFAGHVHAYERSERISNIQYNITDGMSTPVKDQNAPVYITIGDGGNIEGIA--------------------------NNFI----------DPQPSYSAFREASFGHAILEIKNRTHAHYTWHRNKE 361          
BLAST of CN184887 vs. ExPASy Swiss-Prot
Match: PPAF_SOYBN (Purple acid phosphatase OS=Glycine max GN=PAP PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.522e-21
Identity = 64/160 (40.00%), Postives = 75/160 (46.88%), Query Frame = 2
Query:   32 HYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL-----------DPCGPVHITIGDGGNLEKMAITRADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIY 478
            HY E E MRV  E     Y VD+VF GHVHAYERS RV N              D   PV+ITIGDGG LE +A                          TN T          + QP YSAFRE+SFGH I ++ N T A ++WHRNQD      D ++
Sbjct:  323 HYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEGLA--------------------------TNMT----------EPQPKYSAFREASFGHAIFDITNRTHAHYSWHRNQDGVAVEADSLW 446          
BLAST of CN184887 vs. ExPASy Swiss-Prot
Match: PPA26_ARATH (Bifunctional purple acid phosphatase 26 OS=Arabidopsis thaliana GN=PAP26 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.895e-20
Identity = 58/164 (35.37%), Postives = 75/164 (45.73%), Query Frame = 2
Query:   32 HYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL-----------DPCGPVHITIGDGGNLEKMAITRADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQ 490
            H+ E E MR   E     + VD++F GHVHAYERS R+ N              D   PV+IT+GDGGN E +A       G   EP                             QPDYSAFRE+S+GH  L++KN T A++ W+RN D      D+  +  Q
Sbjct:  322 HFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYRISNVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLA-------GRFTEP-----------------------------QPDYSAFREASYGHSTLDIKNRTHAIYHWNRNDDGKKVATDEFVLHNQ 449          
The following BLAST results are available for this feature:
BLAST of CN184887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
PPA10_ARATH4.730e-2341.25Purple acid phosphatase 10 OS=Arabidopsis thaliana... [more]
PPA5_ARATH8.068e-2341.61Purple acid phosphatase 5 OS=Arabidopsis thaliana ... [more]
PPAF1_IPOBA1.054e-2239.02Purple acid phosphatase 1 OS=Ipomoea batatas GN=PA... [more]
PPA25_ARATH1.054e-2239.13Purple acid phosphatase 25 OS=Arabidopsis thaliana... [more]
PPA20_ARATH2.347e-2240.54Probable inactive purple acid phosphatase 20 OS=Ar... [more]
PPA19_ARATH8.920e-2243.33Purple acid phosphatase 19 OS=Arabidopsis thaliana... [more]
PPAF_SOYBN1.522e-2140.00Purple acid phosphatase OS=Glycine max GN=PAP PE=1... [more]
PPA26_ARATH4.895e-2035.37Bifunctional purple acid phosphatase 26 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006E18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006E18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184887 ID=CN184887; Name=CN184887; organism=Citrus sinensis; type=EST; length=740bp
GAACTATGTGGGATCCCCTCGGGCTGCAGGCCATTACAGAGAAGCAGAGT
GTATGAGAGTGGAGATGGAAGCATTACTTTACTCTTATGGTGTTGACATA
GTTTTCAATGGACATGTTCATGCTTATGAGAGGTCAAATCGGGTTTTTAA
TTACACTTTAGATCCATGCGGTCCTGTACACATCACAATTGGAGATGGTG
GAAATCTTGAGAAGATGGCAATCACACGTGCTGACGAACCTGGTAACTGC
CCAGAGCCATCATCTACTCCCGATCCATATATGGGTGGCTTTTGTGCAAC
AAATTTCACGTCTGGTCCTGCTGCGGGTAAGTTCTGTTGGGACCGACAAC
CTGATTACAGTGCCTTCAGAGAAAGTAGTTTTGGGCACGGGATCCTCGAG
GTGAAGAATGAGACTTGGGCGCTGTGGACATGGCACCGGAATCAGGACTC
TAATAATAAAGTTGGGGATCAGATTTACATAGTGAGGCAACCTGATAAGT
GCCCTTTCCATGGCATGCCACAACCCAAGCCTTTGTTGGCATCCAGCTAA
AACTCAATTACTAGTAAACTGAATCCGATTTTCTCCTTGATAAAAATCTG
TGTCCAATATTGCTGCGGATTGATACACCATTATAGATTCTGGAGGTTCT
GGTGGGACCGTCCGATACAAAAATCCAAGTAAACAGATGAAATTGTATCA
CTAGCCGTTTTCATATTGTTAAATGTAAGAGCAGAGTGGA
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